RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	DHX29	Q7Z478	1369 aa	Known RBP	29.79	■■■□□ 2.36
IRF3-231	ENST00000602190	PZP	P20742	1482 aa		29.75	■■■□□ 2.35
IRF3-231	ENST00000602190	KDM5D	Q9BY66	1539 aa		29.74	■■■□□ 2.35
IRF3-231	ENST00000602190	UBAP1L	F5GYI3	381 aa		29.71	■■■□□ 2.35
IRF3-231	ENST00000602190	CCDC141	Q6ZP82	1450 aa		29.71	■■■□□ 2.35
IRF3-231	ENST00000602190	CPS1	P31327	1500 aa		29.71	■■■□□ 2.35
IRF3-231	ENST00000602190	TNR	Q92752	1358 aa		29.67	■■■□□ 2.34
IRF3-231	ENST00000602190	CAMSAP2	Q08AD1	1489 aa		29.67	■■■□□ 2.34
IRF3-231	ENST00000602190	ARHGEF5	Q12774	1597 aa		29.66	■■■□□ 2.34
IRF3-231	ENST00000602190	DEPDC5	O75140	1603 aa		29.66	■■■□□ 2.34
IRF3-231	ENST00000602190	VWDE	Q8N2E2	1590 aa		29.64	■■■□□ 2.34
IRF3-231	ENST00000602190	MED14	O60244	1454 aa		29.64	■■■□□ 2.34
IRF3-231	ENST00000602190	NCOA2	Q15596	1464 aa		29.63	■■■□□ 2.33
IRF3-231	ENST00000602190	SHANK2	Q9UPX8	1470 aa		29.63	■■■□□ 2.33
IRF3-231	ENST00000602190	NLRP1	Q9C000	1473 aa		29.62	■■■□□ 2.33
IRF3-231	ENST00000602190	ALK	Q9UM73	1620 aa		29.61	■■■□□ 2.33
IRF3-231	ENST00000602190	RSPH4A	Q5TD94	716 aa		29.61	■■■□□ 2.33
IRF3-231	ENST00000602190	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.61	■■■□□ 2.33
IRF3-231	ENST00000602190	RNF17	Q9BXT8	1623 aa	Known RBP	29.6	■■■□□ 2.33
IRF3-231	ENST00000602190	KIF3B	O15066	747 aa		29.59	■■■□□ 2.33
IRF3-231	ENST00000602190	MIA2	Q96PC5	1412 aa		29.59	■■■□□ 2.33
IRF3-231	ENST00000602190	MED1	Q15648	1581 aa	Predicted RBP	29.56	■■■□□ 2.32
IRF3-231	ENST00000602190	UGGT1	Q9NYU2	1555 aa		29.56	■■■□□ 2.32
IRF3-231	ENST00000602190	MAST1	Q9Y2H9	1570 aa		29.56	■■■□□ 2.32
IRF3-231	ENST00000602190	ZC3H13	Q5T200	1668 aa	Known RBP	29.55	■■■□□ 2.32
IRF3-231	ENST00000602190	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.52	■■■□□ 2.32
IRF3-231	ENST00000602190	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.51	■■■□□ 2.31
IRF3-231	ENST00000602190	IQGAP1	P46940	1657 aa		29.5	■■■□□ 2.31
IRF3-231	ENST00000602190	WASHC2C	Q9Y4E1	1318 aa		29.5	■■■□□ 2.31
IRF3-231	ENST00000602190	MROH1	Q8NDA8	1641 aa		29.5	■■■□□ 2.31
IRF3-231	ENST00000602190	ABCC3	O15438	1527 aa		29.5	■■■□□ 2.31
IRF3-231	ENST00000602190	NPHP4	O75161	1426 aa	Predicted RBP	29.49	■■■□□ 2.31
IRF3-231	ENST00000602190	HSPA1L	P34931	641 aa		29.49	■■■□□ 2.31
IRF3-231	ENST00000602190	STRCP1	A6NGW2	1772 aa		29.49	■■■□□ 2.31
IRF3-231	ENST00000602190	ANKLE2	Q86XL3	938 aa		29.48	■■■□□ 2.31
IRF3-231	ENST00000602190	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.48	■■■□□ 2.31
IRF3-231	ENST00000602190	TOM1	O60784	492 aa		29.47	■■■□□ 2.31
IRF3-231	ENST00000602190	SYNM	O15061	1565 aa		29.43	■■■□□ 2.3
IRF3-231	ENST00000602190	ERVK-7	P63135	1459 aa		29.42	■■■□□ 2.3
IRF3-231	ENST00000602190	LRRC9	Q6ZRR7	1453 aa		29.41	■■■□□ 2.3
IRF3-231	ENST00000602190	UBR1	Q8IWV7	1749 aa		29.4	■■■□□ 2.3
IRF3-231	ENST00000602190	LRRC7	Q96NW7	1537 aa		29.39	■■■□□ 2.3
IRF3-231	ENST00000602190	TSPY4	P0CV99	314 aa		29.37	■■■□□ 2.29
IRF3-231	ENST00000602190	TSPY10	P0CW01	314 aa		29.37	■■■□□ 2.29
IRF3-231	ENST00000602190	MAP3K1	Q13233	1512 aa		29.36	■■■□□ 2.29
IRF3-231	ENST00000602190	CEP152	O94986	1710 aa		29.36	■■■□□ 2.29
IRF3-231	ENST00000602190	PIP4K2B	P78356	416 aa		29.35	■■■□□ 2.29
IRF3-231	ENST00000602190	ARHGAP23	Q9P227	1491 aa		29.34	■■■□□ 2.29
IRF3-231	ENST00000602190	VPS8	Q8N3P4	1428 aa		29.33	■■■□□ 2.29
IRF3-231	ENST00000602190	SLIT1	O75093	1534 aa		29.32	■■■□□ 2.28
IRF3-231	ENST00000602190	PRDM15	P57071	1507 aa	Predicted RBP	29.31	■■■□□ 2.28
IRF3-231	ENST00000602190	ARHGAP31	Q2M1Z3	1444 aa		29.3	■■■□□ 2.28
IRF3-231	ENST00000602190	DUOX2	Q9NRD8	1548 aa		29.3	■■■□□ 2.28
IRF3-231	ENST00000602190	SCAF1	Q9H7N4	1312 aa	Known RBP	29.29	■■■□□ 2.28
IRF3-231	ENST00000602190	XIRP1	Q702N8	1843 aa	Known RBP	29.28	■■■□□ 2.28
IRF3-231	ENST00000602190	SCAF11	Q99590	1463 aa	Known RBP	29.27	■■■□□ 2.28
IRF3-231	ENST00000602190	MYOM3	Q5VTT5	1437 aa		29.27	■■■□□ 2.28
IRF3-231	ENST00000602190	CROCC2	H7BZ55	1655 aa		29.25	■■■□□ 2.27
IRF3-231	ENST00000602190	CFAP65	Q6ZU64	1925 aa	Known RBP	29.24	■■■□□ 2.27
IRF3-231	ENST00000602190	KDM5A	P29375	1690 aa	Known RBP	29.21	■■■□□ 2.27
IRF3-231	ENST00000602190	ERBIN	Q96RT1	1412 aa		29.2	■■■□□ 2.26
IRF3-231	ENST00000602190	LTK	P29376	864 aa		29.17	■■■□□ 2.26
IRF3-231	ENST00000602190	KANK4	Q5T7N3	995 aa	Predicted RBP	29.17	■■■□□ 2.26
IRF3-231	ENST00000602190	PIK3C2B	O00750	1634 aa		29.16	■■■□□ 2.26
IRF3-231	ENST00000602190	ABCC5	O15440	1437 aa		29.13	■■■□□ 2.25
IRF3-231	ENST00000602190	LMTK2	Q8IWU2	1503 aa		29.13	■■■□□ 2.25
IRF3-231	ENST00000602190	KIF15	Q9NS87	1388 aa		29.13	■■■□□ 2.25
IRF3-231	ENST00000602190	TMEM2	Q9UHN6	1383 aa		29.09	■■■□□ 2.25
IRF3-231	ENST00000602190	PTPN23	Q9H3S7	1636 aa		29.09	■■■□□ 2.25
IRF3-231	ENST00000602190	TET3	O43151	1660 aa		29.08	■■■□□ 2.25
IRF3-231	ENST00000602190	TXNDC2	Q86VQ3	553 aa		29.07	■■■□□ 2.24
IRF3-231	ENST00000602190	FAM135B	Q49AJ0	1406 aa		29.06	■■■□□ 2.24
IRF3-231	ENST00000602190	PHF23	Q9BUL5	403 aa	Predicted RBP	29.06	■■■□□ 2.24
IRF3-231	ENST00000602190	RGS17	Q9UGC6	210 aa	Predicted RBP	29.04	■■■□□ 2.24
IRF3-231	ENST00000602190	EFCAB6	Q5THR3	1501 aa		29.04	■■■□□ 2.24
IRF3-231	ENST00000602190	DAPK1	P53355	1430 aa		29.03	■■■□□ 2.24
IRF3-231	ENST00000602190	NWD1	Q149M9	1564 aa		29.01	■■■□□ 2.24
IRF3-231	ENST00000602190	NOS1	P29475	1434 aa		29.01	■■■□□ 2.23
IRF3-231	ENST00000602190	EID1	Q9Y6B2	187 aa		28.98	■■■□□ 2.23
IRF3-231	ENST00000602190	ADGRB3	O60242	1522 aa		28.96	■■■□□ 2.23
IRF3-231	ENST00000602190	FGD6	Q6ZV73	1430 aa		28.95	■■■□□ 2.23
IRF3-231	ENST00000602190	RRP7BP	Q9NSQ0	103 aa		28.95	■■■□□ 2.22
IRF3-231	ENST00000602190	TMEM94	Q12767	1356 aa		28.95	■■■□□ 2.22
IRF3-231	ENST00000602190	NKTR	P30414	1462 aa	Known RBP	28.95	■■■□□ 2.22
IRF3-231	ENST00000602190	ROBO1	Q9Y6N7	1651 aa		28.94	■■■□□ 2.22
IRF3-231	ENST00000602190	KANK1	Q14678	1352 aa		28.93	■■■□□ 2.22
IRF3-231	ENST00000602190	IDI1	Q13907	227 aa		28.93	■■■□□ 2.22
IRF3-231	ENST00000602190	LOC105371045	A0A1W2PR82	267 aa		28.92	■■■□□ 2.22
IRF3-231	ENST00000602190	KCNA6	P17658	529 aa		28.92	■■■□□ 2.22
IRF3-231	ENST00000602190	ADGRL2	O95490	1459 aa		28.91	■■■□□ 2.22
IRF3-231	ENST00000602190	ANKRD30A	Q9BXX3	1397 aa		28.88	■■■□□ 2.21
IRF3-231	ENST00000602190	RPRD2	Q5VT52	1461 aa	Known RBP	28.86	■■■□□ 2.21
IRF3-231	ENST00000602190	SENP3	Q9H4L4	574 aa	Predicted RBP	28.86	■■■□□ 2.21
IRF3-231	ENST00000602190	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
IRF3-231	ENST00000602190	CHD2	O14647	1828 aa	Known RBP	28.85	■■■□□ 2.21
IRF3-231	ENST00000602190	ZFYVE9	O95405	1425 aa		28.85	■■■□□ 2.21
IRF3-231	ENST00000602190	MYO5B	Q9ULV0	1848 aa		28.81	■■■□□ 2.2
IRF3-231	ENST00000602190	SLC52A1	Q9NWF4	448 aa		28.81	■■■□□ 2.2
IRF3-231	ENST00000602190	SLC26A8	Q96RN1	970 aa		28.79	■■■□□ 2.2
IRF3-231	ENST00000602190	STAG3	Q9UJ98	1225 aa		28.79	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms