RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 PLEKHH2Q8IVE3 1493 aa30.07■■■□□ 2.4
CAPN12-212ENST00000601953 MYO5CQ9NQX4 1742 aa30.07■■■□□ 2.4
CAPN12-212ENST00000601953 FAM135AQ9P2D6 1515 aa30.05■■■□□ 2.4
CAPN12-212ENST00000601953 RALGAPBQ86X10 1494 aa30.04■■■□□ 2.4
CAPN12-212ENST00000601953 USP47Q96K76 1375 aa30.04■■■□□ 2.4
CAPN12-212ENST00000601953 PRKRIP1Q9H875 184 aaPredicted RBP30.04■■■□□ 2.4
CAPN12-212ENST00000601953 UHRF1BP1LA0JNW5 1464 aa30.04■■■□□ 2.4
CAPN12-212ENST00000601953 IPO9Q96P70 1041 aaKnown RBP30.04■■■□□ 2.4
CAPN12-212ENST00000601953 KDM5CP41229 1560 aa30.03■■■□□ 2.4
CAPN12-212ENST00000601953 PLXNC1O60486 1568 aa30.01■■■□□ 2.39
CAPN12-212ENST00000601953 UNC13BO14795 1591 aa30■■■□□ 2.39
CAPN12-212ENST00000601953 ANP32AP39687 249 aaKnown RBP30■■■□□ 2.39
CAPN12-212ENST00000601953 ARID4BQ4LE39 1312 aaPredicted RBP29.98■■■□□ 2.39
CAPN12-212ENST00000601953 ZNF326Q5BKZ1 582 aaKnown RBP29.98■■■□□ 2.39
CAPN12-212ENST00000601953 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
CAPN12-212ENST00000601953 BCORL1Q5H9F3 1711 aa29.96■■■□□ 2.39
CAPN12-212ENST00000601953 PLCH2O75038 1416 aa29.95■■■□□ 2.39
CAPN12-212ENST00000601953 ZBED9Q6R2W3 1325 aa29.95■■■□□ 2.39
CAPN12-212ENST00000601953 ZBTB47Q9UFB7 747 aaPredicted RBP29.92■■■□□ 2.38
CAPN12-212ENST00000601953 CCDC184Q52MB2 194 aa29.9■■■□□ 2.38
CAPN12-212ENST00000601953 IL27Q8NEV9 243 aa29.9■■■□□ 2.38
CAPN12-212ENST00000601953 DUOX2Q9NRD8 1548 aa29.89■■■□□ 2.38
CAPN12-212ENST00000601953 IQGAP3Q86VI3 1631 aa29.89■■■□□ 2.37
CAPN12-212ENST00000601953 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
CAPN12-212ENST00000601953 CARD11Q9BXL7 1154 aa29.86■■■□□ 2.37
CAPN12-212ENST00000601953 CCDC144AA2RUR9 1427 aa29.86■■■□□ 2.37
CAPN12-212ENST00000601953 EFCAB2Q5VUJ9 269 aa29.86■■■□□ 2.37
CAPN12-212ENST00000601953 ERBINQ96RT1 1412 aa29.85■■■□□ 2.37
CAPN12-212ENST00000601953 DCAF11Q8TEB1 546 aa29.85■■■□□ 2.37
CAPN12-212ENST00000601953 MAGI2Q86UL8 1455 aa29.85■■■□□ 2.37
CAPN12-212ENST00000601953 ABCC1P33527 1531 aa29.84■■■□□ 2.37
CAPN12-212ENST00000601953 ROCK2O75116 1388 aaKnown RBP29.84■■■□□ 2.37
CAPN12-212ENST00000601953 MRS2Q9HD23 443 aa29.84■■■□□ 2.37
CAPN12-212ENST00000601953 PLA2R1Q13018 1463 aa29.83■■■□□ 2.37
CAPN12-212ENST00000601953 UBE2Q2Q8WVN8 375 aa29.83■■■□□ 2.37
CAPN12-212ENST00000601953 KDM2AQ9Y2K7 1162 aa29.81■■■□□ 2.36
CAPN12-212ENST00000601953 ARAP3Q8WWN8 1544 aa29.8■■■□□ 2.36
CAPN12-212ENST00000601953 ATP10AO60312 1499 aa29.79■■■□□ 2.36
CAPN12-212ENST00000601953 USP35Q9P2H5 1018 aa29.78■■■□□ 2.36
CAPN12-212ENST00000601953 PRAG1Q86YV5 1406 aa29.78■■■□□ 2.36
CAPN12-212ENST00000601953 CCDC136Q96JN2 1154 aa29.76■■■□□ 2.36
CAPN12-212ENST00000601953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.76■■■□□ 2.357e-7■■□□□ 14.5
CAPN12-212ENST00000601953 TRPM1Q7Z4N2 1603 aa29.75■■■□□ 2.35
CAPN12-212ENST00000601953 TRAPPC8Q9Y2L5 1435 aa29.74■■■□□ 2.35
CAPN12-212ENST00000601953 FAM9BQ8IZU0 186 aa29.73■■■□□ 2.35
CAPN12-212ENST00000601953 ST20-MTHFSA0A0A6YYL1 179 aa29.72■■■□□ 2.35
CAPN12-212ENST00000601953 SMG6Q86US8 1419 aaKnown RBP29.72■■■□□ 2.35
CAPN12-212ENST00000601953 RNF123Q5XPI4 1314 aa29.72■■■□□ 2.35
CAPN12-212ENST00000601953 RTEL1-TNFRSF6BF6WH68 1400 aa29.71■■■□□ 2.35
CAPN12-212ENST00000601953 A2MP01023 1474 aa29.71■■■□□ 2.35
CAPN12-212ENST00000601953 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.34
CAPN12-212ENST00000601953 GPRASP1Q5JY77 1395 aa29.69■■■□□ 2.34
CAPN12-212ENST00000601953 WASHC2CQ9Y4E1 1318 aa29.69■■■□□ 2.34
CAPN12-212ENST00000601953 RTN4Q9NQC3 1192 aaKnown RBP29.68■■■□□ 2.34
CAPN12-212ENST00000601953 WDR7Q9Y4E6 1490 aa29.66■■■□□ 2.34
CAPN12-212ENST00000601953 LAMC1P11047 1609 aa29.66■■■□□ 2.34
CAPN12-212ENST00000601953 ZFYVE16Q7Z3T8 1539 aa29.64■■■□□ 2.33
CAPN12-212ENST00000601953 SPAG9O60271 1321 aaKnown RBP29.64■■■□□ 2.33
CAPN12-212ENST00000601953 RGL3Q3MIN7 710 aa29.63■■■□□ 2.33
CAPN12-212ENST00000601953 E9PCH4 1651 aa29.62■■■□□ 2.33
CAPN12-212ENST00000601953 EIF2AK4Q9P2K8 1649 aaKnown RBP29.62■■■□□ 2.33
CAPN12-212ENST00000601953 KTN1Q86UP2 1357 aaKnown RBP29.59■■■□□ 2.33
CAPN12-212ENST00000601953 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.59■■■□□ 2.33
CAPN12-212ENST00000601953 ABCA9Q8IUA7 1624 aa29.59■■■□□ 2.33
CAPN12-212ENST00000601953 PRDM15P57071 1507 aaPredicted RBP29.58■■■□□ 2.33
CAPN12-212ENST00000601953 NEFMP07197 916 aa29.57■■■□□ 2.32
CAPN12-212ENST00000601953 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
CAPN12-212ENST00000601953 NUDCQ9Y266 331 aa29.57■■■□□ 2.32
CAPN12-212ENST00000601953 AFAP1Q8N556 730 aa29.56■■■□□ 2.32
CAPN12-212ENST00000601953 FANCAO15360 1455 aa29.55■■■□□ 2.32
CAPN12-212ENST00000601953 DEPDC5O75140 1603 aa29.54■■■□□ 2.32
CAPN12-212ENST00000601953 PPM1GO15355 546 aaPredicted RBP29.53■■■□□ 2.32
CAPN12-212ENST00000601953 INO80Q9ULG1 1556 aaPredicted RBP29.53■■■□□ 2.32
CAPN12-212ENST00000601953 ATP7AQ04656 1500 aa29.5■■■□□ 2.31
CAPN12-212ENST00000601953 RALBP1Q15311 655 aa29.5■■■□□ 2.31
CAPN12-212ENST00000601953 TRPM2O94759 1503 aa29.5■■■□□ 2.31
CAPN12-212ENST00000601953 COL17A1Q9UMD9 1497 aaPredicted RBP29.49■■■□□ 2.31
CAPN12-212ENST00000601953 PNISRQ8TF01 805 aaKnown RBP29.49■■■□□ 2.31
CAPN12-212ENST00000601953 PTPRTO14522 1441 aa29.48■■■□□ 2.31
CAPN12-212ENST00000601953 RNF17Q9BXT8 1623 aaKnown RBP29.48■■■□□ 2.31
CAPN12-212ENST00000601953 BRD4O60885 1362 aaPredicted RBP29.46■■■□□ 2.31
CAPN12-212ENST00000601953 TESK2Q96S53 571 aa29.46■■■□□ 2.31
CAPN12-212ENST00000601953 MYBBP1AQ9BQG0 1328 aaKnown RBP29.46■■■□□ 2.31
CAPN12-212ENST00000601953 CNGB1Q14028 1251 aaPredicted RBP29.46■■■□□ 2.31
CAPN12-212ENST00000601953 VWDEQ8N2E2 1590 aa29.45■■■□□ 2.31
CAPN12-212ENST00000601953 TCERG1O14776 1098 aaKnown RBP29.45■■■□□ 2.31
CAPN12-212ENST00000601953 TET3O43151 1660 aa29.45■■■□□ 2.3
CAPN12-212ENST00000601953 TMC1Q8TDI8 760 aa29.45■■■□□ 2.3
CAPN12-212ENST00000601953 ASXL2Q76L83 1435 aa29.44■■■□□ 2.3
CAPN12-212ENST00000601953 ADGRL1O94910 1474 aa29.44■■■□□ 2.3
CAPN12-212ENST00000601953 SPHKAPQ2M3C7 1700 aa29.43■■■□□ 2.3
CAPN12-212ENST00000601953 LAS1LQ9Y4W2 734 aaKnown RBP29.42■■■□□ 2.3
CAPN12-212ENST00000601953 STAC3Q96MF2 364 aa29.42■■■□□ 2.3
CAPN12-212ENST00000601953 SCAPERQ9BY12 1400 aa29.42■■■□□ 2.3
CAPN12-212ENST00000601953 CEP152O94986 1710 aa29.41■■■□□ 2.3
CAPN12-212ENST00000601953 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
CAPN12-212ENST00000601953 MADDQ8WXG6 1647 aa29.4■■■□□ 2.3
CAPN12-212ENST00000601953 KANK1Q14678 1352 aa29.4■■■□□ 2.3
CAPN12-212ENST00000601953 PARD3Q8TEW0 1356 aa29.39■■■□□ 2.3
CAPN12-212ENST00000601953 DISP3Q9P2K9 1392 aa29.39■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms