RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-216ENST00000601582 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
SYMPK-216ENST00000601582 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
SYMPK-216ENST00000601582 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
SYMPK-216ENST00000601582 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-216ENST00000601582 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
SYMPK-216ENST00000601582 PTPN23Q9H3S7 1636 aa18.29■□□□□ 0.52
SYMPK-216ENST00000601582 PZPP20742 1482 aa18.28■□□□□ 0.52
SYMPK-216ENST00000601582 ABCC5O15440 1437 aa18.27■□□□□ 0.52
SYMPK-216ENST00000601582 FAM135AQ9P2D6 1515 aa18.27■□□□□ 0.51
SYMPK-216ENST00000601582 TNRQ92752 1358 aa18.27■□□□□ 0.51
SYMPK-216ENST00000601582 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
SYMPK-216ENST00000601582 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
SYMPK-216ENST00000601582 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
SYMPK-216ENST00000601582 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
SYMPK-216ENST00000601582 LTBP4Q8N2S1 1624 aa18.25■□□□□ 0.51
SYMPK-216ENST00000601582 PKD2Q13563 968 aa18.25■□□□□ 0.51
SYMPK-216ENST00000601582 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
SYMPK-216ENST00000601582 EIF2AK4Q9P2K8 1649 aaKnown RBP18.24■□□□□ 0.51
SYMPK-216ENST00000601582 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
SYMPK-216ENST00000601582 TCOF1Q13428 1488 aaKnown RBP18.24■□□□□ 0.51
SYMPK-216ENST00000601582 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
SYMPK-216ENST00000601582 CROCC2H7BZ55 1655 aa18.23■□□□□ 0.51
SYMPK-216ENST00000601582 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
SYMPK-216ENST00000601582 ABCC3O15438 1527 aa18.23■□□□□ 0.51
SYMPK-216ENST00000601582 DAPK1P53355 1430 aa18.23■□□□□ 0.51
SYMPK-216ENST00000601582 KIF15Q9NS87 1388 aa18.22■□□□□ 0.51
SYMPK-216ENST00000601582 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
SYMPK-216ENST00000601582 ZNF335Q9H4Z2 1342 aaPredicted RBP18.21■□□□□ 0.51
SYMPK-216ENST00000601582 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
SYMPK-216ENST00000601582 CFAP65Q6ZU64 1925 aaKnown RBP18.19■□□□□ 0.5
SYMPK-216ENST00000601582 ZC3H13Q5T200 1668 aaKnown RBP18.19■□□□□ 0.5
SYMPK-216ENST00000601582 CEP152O94986 1710 aa18.19■□□□□ 0.5
SYMPK-216ENST00000601582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.5
SYMPK-216ENST00000601582 NLRP1Q9C000 1473 aa18.16■□□□□ 0.5
SYMPK-216ENST00000601582 THEMISQ8N1K5 641 aaPredicted RBP18.16■□□□□ 0.5
SYMPK-216ENST00000601582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■□□□□ 8.7
SYMPK-216ENST00000601582 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
SYMPK-216ENST00000601582 SPATA31D1Q6ZQQ2 1576 aa18.15■□□□□ 0.5
SYMPK-216ENST00000601582 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
SYMPK-216ENST00000601582 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
SYMPK-216ENST00000601582 ERVK-7P63135 1459 aa18.14■□□□□ 0.5
SYMPK-216ENST00000601582 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
SYMPK-216ENST00000601582 ANKLE2Q86XL3 938 aa18.14■□□□□ 0.49
SYMPK-216ENST00000601582 ANKRD30AQ9BXX3 1397 aa18.14■□□□□ 0.49
SYMPK-216ENST00000601582 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
SYMPK-216ENST00000601582 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
SYMPK-216ENST00000601582 IQSEC2Q5JU85 1478 aa18.11■□□□□ 0.49
SYMPK-216ENST00000601582 DEPDC5O75140 1603 aa18.1■□□□□ 0.49
SYMPK-216ENST00000601582 ARHGAP31Q2M1Z3 1444 aa18.08■□□□□ 0.49
SYMPK-216ENST00000601582 KANK1Q14678 1352 aa18.07■□□□□ 0.48
SYMPK-216ENST00000601582 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
SYMPK-216ENST00000601582 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
SYMPK-216ENST00000601582 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
SYMPK-216ENST00000601582 MED14O60244 1454 aa18.06■□□□□ 0.48
SYMPK-216ENST00000601582 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
SYMPK-216ENST00000601582 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
SYMPK-216ENST00000601582 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
SYMPK-216ENST00000601582 IQGAP1P46940 1657 aa18.02■□□□□ 0.47
SYMPK-216ENST00000601582 LMTK2Q8IWU2 1503 aa18.02■□□□□ 0.47
SYMPK-216ENST00000601582 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
SYMPK-216ENST00000601582 LTKP29376 864 aa18.01■□□□□ 0.47
SYMPK-216ENST00000601582 PIK3C2BO00750 1634 aa18■□□□□ 0.47
SYMPK-216ENST00000601582 CPS1P31327 1500 aa17.99■□□□□ 0.47
SYMPK-216ENST00000601582 IDI1Q13907 227 aa17.99■□□□□ 0.47
SYMPK-216ENST00000601582 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
SYMPK-216ENST00000601582 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
SYMPK-216ENST00000601582 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
SYMPK-216ENST00000601582 SLIT1O75093 1534 aa17.97■□□□□ 0.47
SYMPK-216ENST00000601582 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
SYMPK-216ENST00000601582 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
SYMPK-216ENST00000601582 SYNMO15061 1565 aa17.96■□□□□ 0.47
SYMPK-216ENST00000601582 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
SYMPK-216ENST00000601582 ITGAEP38570 1179 aa17.96■□□□□ 0.47
SYMPK-216ENST00000601582 NOS1P29475 1434 aa17.95■□□□□ 0.46
SYMPK-216ENST00000601582 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
SYMPK-216ENST00000601582 EID1Q9Y6B2 187 aa17.94■□□□□ 0.46
SYMPK-216ENST00000601582 ROCK1Q13464 1354 aa17.92■□□□□ 0.46
SYMPK-216ENST00000601582 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
SYMPK-216ENST00000601582 KDM5AP29375 1690 aaKnown RBP17.91■□□□□ 0.46
SYMPK-216ENST00000601582 TOM1O60784 492 aa17.91■□□□□ 0.46
SYMPK-216ENST00000601582 SLC52A1Q9NWF4 448 aa17.91■□□□□ 0.46
SYMPK-216ENST00000601582 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
SYMPK-216ENST00000601582 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
SYMPK-216ENST00000601582 TET3O43151 1660 aa17.9■□□□□ 0.46
SYMPK-216ENST00000601582 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
SYMPK-216ENST00000601582 UNC13BO14795 1591 aa17.9■□□□□ 0.46
SYMPK-216ENST00000601582 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
SYMPK-216ENST00000601582 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
SYMPK-216ENST00000601582 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
SYMPK-216ENST00000601582 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
SYMPK-216ENST00000601582 HSPA1LP34931 641 aa17.86■□□□□ 0.45
SYMPK-216ENST00000601582 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
SYMPK-216ENST00000601582 E9PCH4 1651 aa17.85■□□□□ 0.45
SYMPK-216ENST00000601582 SLC26A8Q96RN1 970 aa17.85■□□□□ 0.45
SYMPK-216ENST00000601582 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
SYMPK-216ENST00000601582 NUP155O75694 1391 aa17.84■□□□□ 0.45
SYMPK-216ENST00000601582 ILDR2Q71H61 639 aa17.84■□□□□ 0.45
SYMPK-216ENST00000601582 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.45
SYMPK-216ENST00000601582 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms