RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 FAM50AQ14320 339 aaKnown RBP32.65■■■□□ 2.82
SNRPA-211ENST00000601545 DAPK1P53355 1430 aa32.61■■■□□ 2.81
SNRPA-211ENST00000601545 TCOF1Q13428 1488 aaKnown RBP32.61■■■□□ 2.81
SNRPA-211ENST00000601545 PPARGC1BQ86YN6 1023 aaKnown RBP32.6■■■□□ 2.81
SNRPA-211ENST00000601545 KIF15Q9NS87 1388 aa32.58■■■□□ 2.81
SNRPA-211ENST00000601545 KDM5DQ9BY66 1539 aa32.56■■■□□ 2.8
SNRPA-211ENST00000601545 DUOX2Q9NRD8 1548 aa32.55■■■□□ 2.8
SNRPA-211ENST00000601545 STRCQ7RTU9 1775 aa32.55■■■□□ 2.8
SNRPA-211ENST00000601545 SHANK2Q9UPX8 1470 aa32.54■■■□□ 2.8
SNRPA-211ENST00000601545 FBXO41Q8TF61 875 aa32.54■■■□□ 2.8
SNRPA-211ENST00000601545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.53■■■□□ 2.82e-9■■□□□ 11.7
SNRPA-211ENST00000601545 NCKAP5LQ9HCH0 1330 aa32.52■■■□□ 2.8
SNRPA-211ENST00000601545 TNRQ92752 1358 aa32.52■■■□□ 2.8
SNRPA-211ENST00000601545 DNMT1P26358 1616 aaKnown RBP32.51■■■□□ 2.79
SNRPA-211ENST00000601545 NCOA1Q15788 1441 aa32.51■■■□□ 2.79
SNRPA-211ENST00000601545 PZPP20742 1482 aa32.5■■■□□ 2.79
SNRPA-211ENST00000601545 ANKRD30AQ9BXX3 1397 aa32.5■■■□□ 2.79
SNRPA-211ENST00000601545 CERKQ8TCT0 537 aa32.5■■■□□ 2.79
SNRPA-211ENST00000601545 FAM135AQ9P2D6 1515 aa32.5■■■□□ 2.79
SNRPA-211ENST00000601545 CAMSAP1Q5T5Y3 1602 aa32.49■■■□□ 2.79
SNRPA-211ENST00000601545 PTPRTO14522 1441 aa32.47■■■□□ 2.79
SNRPA-211ENST00000601545 MYO3AQ8NEV4 1616 aa32.46■■■□□ 2.79
SNRPA-211ENST00000601545 RNF17Q9BXT8 1623 aaKnown RBP32.45■■■□□ 2.79
SNRPA-211ENST00000601545 EIF2AK4Q9P2K8 1649 aaKnown RBP32.45■■■□□ 2.79
SNRPA-211ENST00000601545 CROCC2H7BZ55 1655 aa32.45■■■□□ 2.79
SNRPA-211ENST00000601545 CEP170BQ9Y4F5 1589 aaPredicted RBP32.45■■■□□ 2.78
SNRPA-211ENST00000601545 ERBINQ96RT1 1412 aa32.43■■■□□ 2.78
SNRPA-211ENST00000601545 ABCC3O15438 1527 aa32.43■■■□□ 2.78
SNRPA-211ENST00000601545 A2ML1A8K2U0 1454 aa32.42■■■□□ 2.78
SNRPA-211ENST00000601545 PKD2Q13563 968 aa32.42■■■□□ 2.78
SNRPA-211ENST00000601545 MROH1Q8NDA8 1641 aa32.38■■■□□ 2.77
SNRPA-211ENST00000601545 ZNF142P52746 1687 aaPredicted RBP32.36■■■□□ 2.77
SNRPA-211ENST00000601545 KANK1Q14678 1352 aa32.35■■■□□ 2.77
SNRPA-211ENST00000601545 ITGAEP38570 1179 aa32.35■■■□□ 2.77
SNRPA-211ENST00000601545 THEMISQ8N1K5 641 aaPredicted RBP32.35■■■□□ 2.77
SNRPA-211ENST00000601545 PLA2R1Q13018 1463 aa32.35■■■□□ 2.77
SNRPA-211ENST00000601545 ZC3H13Q5T200 1668 aaKnown RBP32.31■■■□□ 2.76
SNRPA-211ENST00000601545 ADGRL2O95490 1459 aa32.31■■■□□ 2.76
SNRPA-211ENST00000601545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.31■■■□□ 2.76
SNRPA-211ENST00000601545 NLRP1Q9C000 1473 aa32.29■■■□□ 2.76
SNRPA-211ENST00000601545 ANKLE2Q86XL3 938 aa32.29■■■□□ 2.76
SNRPA-211ENST00000601545 ERVK-7P63135 1459 aa32.29■■■□□ 2.76
SNRPA-211ENST00000601545 CEP152O94986 1710 aa32.29■■■□□ 2.76
SNRPA-211ENST00000601545 PRDM15P57071 1507 aaPredicted RBP32.26■■■□□ 2.76
SNRPA-211ENST00000601545 ANKRD50Q9ULJ7 1429 aa32.26■■■□□ 2.75
SNRPA-211ENST00000601545 SPATA31D1Q6ZQQ2 1576 aa32.25■■■□□ 2.75
SNRPA-211ENST00000601545 ZNF335Q9H4Z2 1342 aaPredicted RBP32.25■■■□□ 2.75
SNRPA-211ENST00000601545 ARHGAP31Q2M1Z3 1444 aa32.24■■■□□ 2.75
SNRPA-211ENST00000601545 UGGT1Q9NYU2 1555 aa32.24■■■□□ 2.75
SNRPA-211ENST00000601545 CFAP65Q6ZU64 1925 aaKnown RBP32.22■■■□□ 2.75
SNRPA-211ENST00000601545 DEPDC5O75140 1603 aa32.19■■■□□ 2.74
SNRPA-211ENST00000601545 LTBP4Q8N2S1 1624 aa32.17■■■□□ 2.74
SNRPA-211ENST00000601545 STAG3Q9UJ98 1225 aa32.14■■■□□ 2.74
SNRPA-211ENST00000601545 ROCK1Q13464 1354 aa32.14■■■□□ 2.74
SNRPA-211ENST00000601545 LMTK2Q8IWU2 1503 aa32.12■■■□□ 2.73
SNRPA-211ENST00000601545 VWDEQ8N2E2 1590 aa32.11■■■□□ 2.73
SNRPA-211ENST00000601545 IDI1Q13907 227 aa32.11■■■□□ 2.73
SNRPA-211ENST00000601545 TXNDC2Q86VQ3 553 aa32.08■■■□□ 2.73
SNRPA-211ENST00000601545 NPHP4O75161 1426 aaPredicted RBP32.08■■■□□ 2.73
SNRPA-211ENST00000601545 NEURL4Q96JN8 1562 aa32.07■■■□□ 2.72
SNRPA-211ENST00000601545 LTKP29376 864 aa32.04■■■□□ 2.72
SNRPA-211ENST00000601545 POLR1AO95602 1720 aaPredicted RBP32.03■■■□□ 2.72
SNRPA-211ENST00000601545 EID1Q9Y6B2 187 aa32.02■■■□□ 2.72
SNRPA-211ENST00000601545 MED14O60244 1454 aa32.02■■■□□ 2.72
SNRPA-211ENST00000601545 NOS1P29475 1434 aa32■■■□□ 2.71
SNRPA-211ENST00000601545 RRBP1Q9P2E9 1410 aaKnown RBP32■■■□□ 2.71
SNRPA-211ENST00000601545 EFCAB6Q5THR3 1501 aa32■■■□□ 2.71
SNRPA-211ENST00000601545 SLC52A1Q9NWF4 448 aa32■■■□□ 2.71
SNRPA-211ENST00000601545 NUP155O75694 1391 aa31.99■■■□□ 2.71
SNRPA-211ENST00000601545 UBR1Q8IWV7 1749 aa31.99■■■□□ 2.71
SNRPA-211ENST00000601545 UBAP1LF5GYI3 381 aa31.96■■■□□ 2.71
SNRPA-211ENST00000601545 IQSEC2Q5JU85 1478 aa31.96■■■□□ 2.71
SNRPA-211ENST00000601545 PIK3C2BO00750 1634 aa31.95■■■□□ 2.71
SNRPA-211ENST00000601545 SCAF11Q99590 1463 aaKnown RBP31.95■■■□□ 2.7
SNRPA-211ENST00000601545 TMEM2Q9UHN6 1383 aa31.94■■■□□ 2.7
SNRPA-211ENST00000601545 SYNMO15061 1565 aa31.93■■■□□ 2.7
SNRPA-211ENST00000601545 RPRD2Q5VT52 1461 aaKnown RBP31.92■■■□□ 2.7
SNRPA-211ENST00000601545 ARHGAP23Q9P227 1491 aa31.92■■■□□ 2.7
SNRPA-211ENST00000601545 UNC13BO14795 1591 aa31.92■■■□□ 2.7
SNRPA-211ENST00000601545 SLIT1O75093 1534 aa31.91■■■□□ 2.7
SNRPA-211ENST00000601545 CHGAP10645 457 aaKnown RBP31.89■■■□□ 2.7
SNRPA-211ENST00000601545 TET3O43151 1660 aa31.89■■■□□ 2.7
SNRPA-211ENST00000601545 IQGAP1P46940 1657 aa31.89■■■□□ 2.7
SNRPA-211ENST00000601545 CPS1P31327 1500 aa31.85■■■□□ 2.69
SNRPA-211ENST00000601545 BCANQ96GW7 911 aa31.84■■■□□ 2.69
SNRPA-211ENST00000601545 SENP3Q9H4L4 574 aaPredicted RBP31.84■■■□□ 2.69
SNRPA-211ENST00000601545 IQGAP3Q86VI3 1631 aa31.8■■■□□ 2.68
SNRPA-211ENST00000601545 SLC26A8Q96RN1 970 aa31.8■■■□□ 2.68
SNRPA-211ENST00000601545 NAIPQ13075 1403 aa31.8■■■□□ 2.68
SNRPA-211ENST00000601545 GCC2Q8IWJ2 1684 aa31.8■■■□□ 2.68
SNRPA-211ENST00000601545 ADGRB3O60242 1522 aa31.79■■■□□ 2.68
SNRPA-211ENST00000601545 TOM1O60784 492 aa31.78■■■□□ 2.68
SNRPA-211ENST00000601545 HDGFP51858 240 aaKnown RBP31.78■■■□□ 2.68
SNRPA-211ENST00000601545 TRIM52Q96A61 297 aa31.78■■■□□ 2.68
SNRPA-211ENST00000601545 SCAF1Q9H7N4 1312 aaKnown RBP31.77■■■□□ 2.68
SNRPA-211ENST00000601545 E9PCH4 1651 aa31.77■■■□□ 2.68
SNRPA-211ENST00000601545 PIP4K2BP78356 416 aa31.77■■■□□ 2.68
SNRPA-211ENST00000601545 KDM5AP29375 1690 aaKnown RBP31.76■■■□□ 2.67
SNRPA-211ENST00000601545 PPP1R15AO75807 674 aaPredicted RBP31.75■■■□□ 2.67
SNRPA-211ENST00000601545 NUTM2DQ5VT03 806 aaPredicted RBP31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms