RNA–Protein interactions for RNA: ENST00000601004.1

CDC42EP3P1-201, Transcript of CDC42 effector protein 3 pseudogene 1, humanhuman

BASIC

Gene CDC42EP3P1, Length 764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3P1-201ENST00000601004 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 ESF1Q9H501 851 aaKnown RBP8.35□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 A2MP01023 1474 aa8.34□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 HNRNPMP52272 730 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 CNTLNQ9NXG0 1405 aa8.34□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 DIP2CQ9Y2E4 1556 aa8.34□□□□□ -1.07
CDC42EP3P1-201ENST00000601004 GCC2Q8IWJ2 1684 aa8.34□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 KANK1Q14678 1352 aa8.33□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 DHX29Q7Z478 1369 aaKnown RBP8.33□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ABCC5O15440 1437 aa8.32□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 AFAP1Q8N556 730 aa8.32□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ARHGEF12Q9NZN5 1544 aa8.32□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ABCA6Q8N139 1617 aa8.32□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 HRCP23327 699 aa8.31□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 RNF17Q9BXT8 1623 aaKnown RBP8.31□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 KIF15Q9NS87 1388 aa8.31□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 COL17A1Q9UMD9 1497 aaPredicted RBP8.31□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 TRIM26Q12899 539 aaPredicted RBP8.3□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 HFM1A2PYH4 1435 aa8.29□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 ANKRD50Q9ULJ7 1429 aa8.29□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 PRDM15P57071 1507 aaPredicted RBP8.28□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 KDM5DQ9BY66 1539 aa8.28□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 SETD1BQ9UPS6 1966 aaKnown RBP8.28□□□□□ -1.08
CDC42EP3P1-201ENST00000601004 RPRD2Q5VT52 1461 aaKnown RBP8.27□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 UNC13BO14795 1591 aa8.27□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 ADAMTSL3P82987 1691 aa8.25□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 SETD5Q9C0A6 1442 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 KIF3BO15066 747 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 RRP7BPQ9NSQ0 103 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 WASHC2CQ9Y4E1 1318 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 TET3O43151 1660 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 LMTK2Q8IWU2 1503 aa8.24□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 NAIPQ13075 1403 aa8.23□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 NPATQ14207 1427 aa8.23□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 PPARGC1BQ86YN6 1023 aaKnown RBP8.23□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 ARHGAP31Q2M1Z3 1444 aa8.22□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 KDM5AP29375 1690 aaKnown RBP8.22□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 ITGAEP38570 1179 aa8.22□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 CHIC2Q9UKJ5 165 aa8.22□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 CLTCQ00610 1675 aaKnown RBP8.21□□□□□ -1.09
CDC42EP3P1-201ENST00000601004 VWDEQ8N2E2 1590 aa8.21□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 GGT6Q6P531 493 aa8.2□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 RIMS1Q86UR5 1692 aaKnown RBP8.2□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 PZPP20742 1482 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 EFCAB6Q5THR3 1501 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 C3P01024 1663 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 PREX1Q8TCU6 1659 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 NUP155O75694 1391 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 ABCC3O15438 1527 aa8.19□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 CEP152O94986 1710 aa8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 CACNB1Q02641 598 aaPredicted RBP8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 SLC52A1Q9NWF4 448 aa8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 PTPRKQ15262 1439 aa8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 NLRP1Q9C000 1473 aa8.18□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 CAPN15O75808 1086 aa8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 STAC3Q96MF2 364 aa8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 ATF5Q9Y2D1 282 aaPredicted RBP8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 ZMYM3Q14202 1370 aa8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 MROH1Q8NDA8 1641 aa8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 SPHKAPQ2M3C7 1700 aa8.17□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 PTPRMP28827 1452 aa8.16□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 SPINK5Q9NQ38 1064 aaPredicted RBP8.16□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 KIF1BO60333 1816 aa8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 SIGLEC1Q9BZZ2 1709 aa8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 ZNF142P52746 1687 aaPredicted RBP8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 SPATA31D1Q6ZQQ2 1576 aa8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 NEURL4Q96JN8 1562 aa8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
CDC42EP3P1-201ENST00000601004 UHRF1BP1Q6BDS2 1440 aa8.14□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 MLECQ14165 292 aa8.14□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 E9PCH4 1651 aa8.14□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 TRPM2O94759 1503 aa8.13□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 ERVK-7P63135 1459 aa8.12□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 CCDC144AA2RUR9 1427 aa8.12□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 TNRQ92752 1358 aa8.11□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 MYO3AQ8NEV4 1616 aa8.11□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 A2ML1A8K2U0 1454 aa8.11□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 CFAP65Q6ZU64 1925 aaKnown RBP8.11□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 NOS1P29475 1434 aa8.11□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 MPHOSPH9Q99550 1183 aa8.1□□□□□ -1.11
CDC42EP3P1-201ENST00000601004 STAG3Q9UJ98 1225 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms