RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	WASHC2C	Q9Y4E1	1318 aa		33.88	■■■■□ 3.01
FARP1-231	ENST00000600648	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.86	■■■■□ 3.01
FARP1-231	ENST00000600648	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.85	■■■■□ 3.01
FARP1-231	ENST00000600648	KDM5D	Q9BY66	1539 aa		33.84	■■■■□ 3.01
FARP1-231	ENST00000600648	ZNF142	P52746	1687 aa	Predicted RBP	33.83	■■■■□ 3.01
FARP1-231	ENST00000600648	MAST1	Q9Y2H9	1570 aa		33.81	■■■■□ 3
FARP1-231	ENST00000600648	TNR	Q92752	1358 aa		33.79	■■■■□ 3
FARP1-231	ENST00000600648	PZP	P20742	1482 aa		33.77	■■■■□ 3
FARP1-231	ENST00000600648	FAM135A	Q9P2D6	1515 aa		33.76	■■■■□ 3
FARP1-231	ENST00000600648	A2ML1	A8K2U0	1454 aa		33.76	■■■□□ 2.99
FARP1-231	ENST00000600648	PLA2R1	Q13018	1463 aa		33.75	■■■□□ 2.99
FARP1-231	ENST00000600648	PKD2	Q13563	968 aa		33.74	■■■□□ 2.99
FARP1-231	ENST00000600648	LTBP4	Q8N2S1	1624 aa		33.71	■■■□□ 2.99
FARP1-231	ENST00000600648	PTPN23	Q9H3S7	1636 aa		33.71	■■■□□ 2.99
FARP1-231	ENST00000600648	TCOF1	Q13428	1488 aa	Known RBP	33.7	■■■□□ 2.99
FARP1-231	ENST00000600648	DNMT1	P26358	1616 aa	Known RBP	33.7	■■■□□ 2.99
FARP1-231	ENST00000600648	RNF17	Q9BXT8	1623 aa	Known RBP	33.7	■■■□□ 2.99
FARP1-231	ENST00000600648	ABCC5	O15440	1437 aa		33.7	■■■□□ 2.98
FARP1-231	ENST00000600648	RRP7BP	Q9NSQ0	103 aa		33.67	■■■□□ 2.98
FARP1-231	ENST00000600648	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.67	■■■□□ 2.98
FARP1-231	ENST00000600648	ABCC3	O15438	1527 aa		33.66	■■■□□ 2.98
FARP1-231	ENST00000600648	FGD6	Q6ZV73	1430 aa		33.66	■■■□□ 2.98
FARP1-231	ENST00000600648	KIF15	Q9NS87	1388 aa		33.66	■■■□□ 2.98
FARP1-231	ENST00000600648	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.65	■■■□□ 2.98
FARP1-231	ENST00000600648	DUOX2	Q9NRD8	1548 aa		33.65	■■■□□ 2.98
FARP1-231	ENST00000600648	SHANK2	Q9UPX8	1470 aa		33.62	■■■□□ 2.97
FARP1-231	ENST00000600648	DAPK1	P53355	1430 aa		33.62	■■■□□ 2.97
FARP1-231	ENST00000600648	CROCC2	H7BZ55	1655 aa		33.61	■■■□□ 2.97
FARP1-231	ENST00000600648	MROH1	Q8NDA8	1641 aa		33.61	■■■□□ 2.97
FARP1-231	ENST00000600648	CHIC2	Q9UKJ5	165 aa		33.6	■■■□□ 2.97
FARP1-231	ENST00000600648	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
FARP1-231	ENST00000600648	ZC3H13	Q5T200	1668 aa	Known RBP	33.58	■■■□□ 2.97
FARP1-231	ENST00000600648	NLRP1	Q9C000	1473 aa		33.57	■■■□□ 2.97
FARP1-231	ENST00000600648	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.56	■■■□□ 2.96
FARP1-231	ENST00000600648	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.55	■■■□□ 2.96
FARP1-231	ENST00000600648	CEP152	O94986	1710 aa		33.55	■■■□□ 2.96
FARP1-231	ENST00000600648	UGGT1	Q9NYU2	1555 aa		33.54	■■■□□ 2.96
FARP1-231	ENST00000600648	ERBIN	Q96RT1	1412 aa		33.53	■■■□□ 2.96
FARP1-231	ENST00000600648	ERVK-7	P63135	1459 aa		33.52	■■■□□ 2.96
FARP1-231	ENST00000600648	ANKLE2	Q86XL3	938 aa		33.52	■■■□□ 2.96
FARP1-231	ENST00000600648	SPATA31D1	Q6ZQQ2	1576 aa		33.51	■■■□□ 2.95
FARP1-231	ENST00000600648	IQSEC2	Q5JU85	1478 aa		33.5	■■■□□ 2.95
FARP1-231	ENST00000600648	FAM50A	Q14320	339 aa	Known RBP	33.5	■■■□□ 2.95
FARP1-231	ENST00000600648	NEURL4	Q96JN8	1562 aa		33.5	■■■□□ 2.95
FARP1-231	ENST00000600648	POLR1A	O95602	1720 aa	Predicted RBP	33.5	■■■□□ 2.95
FARP1-231	ENST00000600648	ANKRD30A	Q9BXX3	1397 aa		33.48	■■■□□ 2.95
FARP1-231	ENST00000600648	CFAP65	Q6ZU64	1925 aa	Known RBP	33.47	■■■□□ 2.95
FARP1-231	ENST00000600648	PRDM15	P57071	1507 aa	Predicted RBP	33.46	■■■□□ 2.95
FARP1-231	ENST00000600648	UBAP1L	F5GYI3	381 aa		33.42	■■■□□ 2.94
FARP1-231	ENST00000600648	KANK1	Q14678	1352 aa		33.41	■■■□□ 2.94
FARP1-231	ENST00000600648	NPHP4	O75161	1426 aa	Predicted RBP	33.4	■■■□□ 2.94
FARP1-231	ENST00000600648	ARHGAP31	Q2M1Z3	1444 aa		33.37	■■■□□ 2.93
FARP1-231	ENST00000600648	DEPDC5	O75140	1603 aa		33.37	■■■□□ 2.93
FARP1-231	ENST00000600648	MED14	O60244	1454 aa		33.34	■■■□□ 2.93
FARP1-231	ENST00000600648	ADGRL2	O95490	1459 aa		33.32	■■■□□ 2.92
FARP1-231	ENST00000600648	UBR1	Q8IWV7	1749 aa		33.3	■■■□□ 2.92
FARP1-231	ENST00000600648	VWDE	Q8N2E2	1590 aa		33.29	■■■□□ 2.92
FARP1-231	ENST00000600648	IQGAP1	P46940	1657 aa		33.29	■■■□□ 2.92
FARP1-231	ENST00000600648	CPS1	P31327	1500 aa		33.28	■■■□□ 2.92
FARP1-231	ENST00000600648	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.28	■■■□□ 2.92
FARP1-231	ENST00000600648	LMTK2	Q8IWU2	1503 aa		33.25	■■■□□ 2.91
FARP1-231	ENST00000600648	LTK	P29376	864 aa		33.24	■■■□□ 2.91
FARP1-231	ENST00000600648	TXNDC2	Q86VQ3	553 aa		33.24	■■■□□ 2.91
FARP1-231	ENST00000600648	STAG3	Q9UJ98	1225 aa		33.24	■■■□□ 2.91
FARP1-231	ENST00000600648	ANKRD50	Q9ULJ7	1429 aa		33.24	■■■□□ 2.91
FARP1-231	ENST00000600648	DISP3	Q9P2K9	1392 aa		33.23	■■■□□ 2.91
FARP1-231	ENST00000600648	SCAF11	Q99590	1463 aa	Known RBP	33.23	■■■□□ 2.91
FARP1-231	ENST00000600648	SCAF1	Q9H7N4	1312 aa	Known RBP	33.23	■■■□□ 2.91
FARP1-231	ENST00000600648	PIK3C2B	O00750	1634 aa		33.2	■■■□□ 2.91
FARP1-231	ENST00000600648	PIP4K2B	P78356	416 aa		33.2	■■■□□ 2.91
FARP1-231	ENST00000600648	IDI1	Q13907	227 aa		33.2	■■■□□ 2.91
FARP1-231	ENST00000600648	ARHGAP23	Q9P227	1491 aa		33.18	■■■□□ 2.9
FARP1-231	ENST00000600648	EID1	Q9Y6B2	187 aa		33.18	■■■□□ 2.9
FARP1-231	ENST00000600648	SLIT1	O75093	1534 aa		33.18	■■■□□ 2.9
FARP1-231	ENST00000600648	EFCAB6	Q5THR3	1501 aa		33.18	■■■□□ 2.9
FARP1-231	ENST00000600648	TOM1	O60784	492 aa		33.15	■■■□□ 2.9
FARP1-231	ENST00000600648	ITGAE	P38570	1179 aa		33.15	■■■□□ 2.9
FARP1-231	ENST00000600648	SYNM	O15061	1565 aa		33.14	■■■□□ 2.9
FARP1-231	ENST00000600648	TMEM2	Q9UHN6	1383 aa		33.14	■■■□□ 2.9
FARP1-231	ENST00000600648	NOS1	P29475	1434 aa		33.12	■■■□□ 2.89
FARP1-231	ENST00000600648	STRCP1	A6NGW2	1772 aa		33.11	■■■□□ 2.89
FARP1-231	ENST00000600648	LRRC7	Q96NW7	1537 aa		33.07	■■■□□ 2.89
FARP1-231	ENST00000600648	HSPA1L	P34931	641 aa		33.05	■■■□□ 2.88
FARP1-231	ENST00000600648	SLC52A1	Q9NWF4	448 aa		33.05	■■■□□ 2.88
FARP1-231	ENST00000600648	ROCK1	Q13464	1354 aa		33.05	■■■□□ 2.88
FARP1-231	ENST00000600648	ILDR2	Q71H61	639 aa		33.03	■■■□□ 2.88
FARP1-231	ENST00000600648	ADGRB3	O60242	1522 aa		33.02	■■■□□ 2.88
FARP1-231	ENST00000600648	RPRD2	Q5VT52	1461 aa	Known RBP	33.02	■■■□□ 2.88
FARP1-231	ENST00000600648	TET3	O43151	1660 aa		33.01	■■■□□ 2.88
FARP1-231	ENST00000600648	KDM5A	P29375	1690 aa	Known RBP	33.01	■■■□□ 2.88
FARP1-231	ENST00000600648	UNC13B	O14795	1591 aa		33	■■■□□ 2.87
FARP1-231	ENST00000600648	SENP3	Q9H4L4	574 aa	Predicted RBP	33	■■■□□ 2.87
FARP1-231	ENST00000600648	SLC26A8	Q96RN1	970 aa		32.98	■■■□□ 2.87
FARP1-231	ENST00000600648	ALK	Q9UM73	1620 aa		32.98	■■■□□ 2.87
FARP1-231	ENST00000600648	BCAN	Q96GW7	911 aa		32.96	■■■□□ 2.87
FARP1-231	ENST00000600648	GCC2	Q8IWJ2	1684 aa		32.94	■■■□□ 2.86
FARP1-231	ENST00000600648	CHGA	P10645	457 aa	Known RBP	32.93	■■■□□ 2.86
FARP1-231	ENST00000600648	NUP155	O75694	1391 aa		32.93	■■■□□ 2.86
FARP1-231	ENST00000600648		E9PCH4	1651 aa		32.88	■■■□□ 2.85
FARP1-231	ENST00000600648	IQGAP3	Q86VI3	1631 aa		32.88	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms