RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
ARHGEF1-222ENST00000600517 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
ARHGEF1-222ENST00000600517 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
ARHGEF1-222ENST00000600517 CROCC2H7BZ55 1655 aa20.71■□□□□ 0.91
ARHGEF1-222ENST00000600517 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
ARHGEF1-222ENST00000600517 NCOA1Q15788 1441 aa20.7■□□□□ 0.9
ARHGEF1-222ENST00000600517 FAM135AQ9P2D6 1515 aa20.7■□□□□ 0.9
ARHGEF1-222ENST00000600517 PREX1Q8TCU6 1659 aa20.7■□□□□ 0.9
ARHGEF1-222ENST00000600517 PTPRKQ15262 1439 aa20.7■□□□□ 0.9
ARHGEF1-222ENST00000600517 ERBINQ96RT1 1412 aa20.69■□□□□ 0.9
ARHGEF1-222ENST00000600517 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
ARHGEF1-222ENST00000600517 EIF2AK4Q9P2K8 1649 aaKnown RBP20.67■□□□□ 0.9
ARHGEF1-222ENST00000600517 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
ARHGEF1-222ENST00000600517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.66■□□□□ 0.9
ARHGEF1-222ENST00000600517 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-222ENST00000600517 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF1-222ENST00000600517 PZPP20742 1482 aa20.62■□□□□ 0.89
ARHGEF1-222ENST00000600517 MROH1Q8NDA8 1641 aa20.61■□□□□ 0.89
ARHGEF1-222ENST00000600517 ABCC3O15438 1527 aa20.61■□□□□ 0.89
ARHGEF1-222ENST00000600517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.891e-6■■■■□ 20.4
ARHGEF1-222ENST00000600517 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
ARHGEF1-222ENST00000600517 TNRQ92752 1358 aa20.58■□□□□ 0.88
ARHGEF1-222ENST00000600517 ITGAEP38570 1179 aa20.57■□□□□ 0.88
ARHGEF1-222ENST00000600517 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-222ENST00000600517 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
ARHGEF1-222ENST00000600517 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
ARHGEF1-222ENST00000600517 PRDM15P57071 1507 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF1-222ENST00000600517 KANK1Q14678 1352 aa20.56■□□□□ 0.88
ARHGEF1-222ENST00000600517 ZC3H13Q5T200 1668 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-222ENST00000600517 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
ARHGEF1-222ENST00000600517 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
ARHGEF1-222ENST00000600517 A2ML1A8K2U0 1454 aa20.52■□□□□ 0.88
ARHGEF1-222ENST00000600517 MYO3AQ8NEV4 1616 aa20.52■□□□□ 0.88
ARHGEF1-222ENST00000600517 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF1-222ENST00000600517 VWDEQ8N2E2 1590 aa20.5■□□□□ 0.87
ARHGEF1-222ENST00000600517 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
ARHGEF1-222ENST00000600517 LMTK2Q8IWU2 1503 aa20.49■□□□□ 0.87
ARHGEF1-222ENST00000600517 ERVK-7P63135 1459 aa20.49■□□□□ 0.87
ARHGEF1-222ENST00000600517 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
ARHGEF1-222ENST00000600517 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF1-222ENST00000600517 SPATA31D1Q6ZQQ2 1576 aa20.48■□□□□ 0.87
ARHGEF1-222ENST00000600517 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
ARHGEF1-222ENST00000600517 CEP152O94986 1710 aa20.47■□□□□ 0.87
ARHGEF1-222ENST00000600517 PTPRTO14522 1441 aa20.47■□□□□ 0.87
ARHGEF1-222ENST00000600517 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
ARHGEF1-222ENST00000600517 PKD2Q13563 968 aa20.46■□□□□ 0.87
ARHGEF1-222ENST00000600517 THEMISQ8N1K5 641 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-222ENST00000600517 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
ARHGEF1-222ENST00000600517 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.85
ARHGEF1-222ENST00000600517 UNC13BO14795 1591 aa20.38■□□□□ 0.85
ARHGEF1-222ENST00000600517 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
ARHGEF1-222ENST00000600517 NUP155O75694 1391 aa20.38■□□□□ 0.85
ARHGEF1-222ENST00000600517 ANKLE2Q86XL3 938 aa20.38■□□□□ 0.85
ARHGEF1-222ENST00000600517 NOS1P29475 1434 aa20.37■□□□□ 0.85
ARHGEF1-222ENST00000600517 NAIPQ13075 1403 aa20.36■□□□□ 0.85
ARHGEF1-222ENST00000600517 IDI1Q13907 227 aa20.36■□□□□ 0.85
ARHGEF1-222ENST00000600517 RPRD2Q5VT52 1461 aaKnown RBP20.36■□□□□ 0.85
ARHGEF1-222ENST00000600517 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-222ENST00000600517 ILDR1Q86SU0 546 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-222ENST00000600517 CERKQ8TCT0 537 aa20.34■□□□□ 0.85
ARHGEF1-222ENST00000600517 SLC52A1Q9NWF4 448 aa20.34■□□□□ 0.85
ARHGEF1-222ENST00000600517 TET3O43151 1660 aa20.32■□□□□ 0.84
ARHGEF1-222ENST00000600517 HFM1A2PYH4 1435 aa20.32■□□□□ 0.84
ARHGEF1-222ENST00000600517 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
ARHGEF1-222ENST00000600517 FBXO41Q8TF61 875 aa20.3■□□□□ 0.84
ARHGEF1-222ENST00000600517 SYNMO15061 1565 aa20.29■□□□□ 0.84
ARHGEF1-222ENST00000600517 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
ARHGEF1-222ENST00000600517 MED14O60244 1454 aa20.29■□□□□ 0.84
ARHGEF1-222ENST00000600517 UBR1Q8IWV7 1749 aa20.28■□□□□ 0.84
ARHGEF1-222ENST00000600517 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
ARHGEF1-222ENST00000600517 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
ARHGEF1-222ENST00000600517 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.84
ARHGEF1-222ENST00000600517 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.83
ARHGEF1-222ENST00000600517 LTKP29376 864 aa20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 PIK3C2BO00750 1634 aa20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 LTBP4Q8N2S1 1624 aa20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 SLIT1O75093 1534 aa20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF1-222ENST00000600517 TMEM2Q9UHN6 1383 aa20.25■□□□□ 0.83
ARHGEF1-222ENST00000600517 EID1Q9Y6B2 187 aa20.24■□□□□ 0.83
ARHGEF1-222ENST00000600517 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF1-222ENST00000600517 E9PCH4 1651 aa20.23■□□□□ 0.83
ARHGEF1-222ENST00000600517 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
ARHGEF1-222ENST00000600517 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-222ENST00000600517 KDM5AP29375 1690 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-222ENST00000600517 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
ARHGEF1-222ENST00000600517 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-222ENST00000600517 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-222ENST00000600517 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
ARHGEF1-222ENST00000600517 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
ARHGEF1-222ENST00000600517 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
ARHGEF1-222ENST00000600517 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
ARHGEF1-222ENST00000600517 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
ARHGEF1-222ENST00000600517 ZFYVE9O95405 1425 aa20.12■□□□□ 0.81
ARHGEF1-222ENST00000600517 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
ARHGEF1-222ENST00000600517 RIMS2Q9UQ26 1411 aa20.11■□□□□ 0.81
ARHGEF1-222ENST00000600517 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
ARHGEF1-222ENST00000600517 CPS1P31327 1500 aa20.1■□□□□ 0.81
ARHGEF1-222ENST00000600517 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms