RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 WASHC2CQ9Y4E1 1318 aa29.88■■■□□ 2.37
FARP1-229ENST00000600190 TCOF1Q13428 1488 aaKnown RBP29.87■■■□□ 2.37
FARP1-229ENST00000600190 VPS8Q8N3P4 1428 aa29.87■■■□□ 2.37
FARP1-229ENST00000600190 A2ML1A8K2U0 1454 aa29.87■■■□□ 2.37
FARP1-229ENST00000600190 LRRC9Q6ZRR7 1453 aa29.85■■■□□ 2.37
FARP1-229ENST00000600190 DISP3Q9P2K9 1392 aa29.84■■■□□ 2.37
FARP1-229ENST00000600190 KDM5DQ9BY66 1539 aa29.84■■■□□ 2.37
FARP1-229ENST00000600190 ARHGEF5Q12774 1597 aa29.84■■■□□ 2.37
FARP1-229ENST00000600190 DNMT1P26358 1616 aaKnown RBP29.83■■■□□ 2.37
FARP1-229ENST00000600190 TNRQ92752 1358 aa29.83■■■□□ 2.37
FARP1-229ENST00000600190 PZPP20742 1482 aa29.8■■■□□ 2.36
FARP1-229ENST00000600190 KANK4Q5T7N3 995 aaPredicted RBP29.79■■■□□ 2.36
FARP1-229ENST00000600190 FAM135AQ9P2D6 1515 aa29.78■■■□□ 2.36
FARP1-229ENST00000600190 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
FARP1-229ENST00000600190 MIA2Q96PC5 1412 aa29.71■■■□□ 2.35
FARP1-229ENST00000600190 MAP3K1Q13233 1512 aa29.7■■■□□ 2.34
FARP1-229ENST00000600190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.69■■■□□ 2.34
FARP1-229ENST00000600190 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
FARP1-229ENST00000600190 ILDR2Q71H61 639 aa29.69■■■□□ 2.34
FARP1-229ENST00000600190 THEMISQ8N1K5 641 aaPredicted RBP29.69■■■□□ 2.34
FARP1-229ENST00000600190 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
FARP1-229ENST00000600190 ANKLE2Q86XL3 938 aa29.68■■■□□ 2.34
FARP1-229ENST00000600190 MYOM3Q5VTT5 1437 aa29.68■■■□□ 2.34
FARP1-229ENST00000600190 NEURL4Q96JN8 1562 aa29.66■■■□□ 2.34
FARP1-229ENST00000600190 NLRP1Q9C000 1473 aa29.66■■■□□ 2.34
FARP1-229ENST00000600190 RNF17Q9BXT8 1623 aaKnown RBP29.65■■■□□ 2.34
FARP1-229ENST00000600190 UGGT1Q9NYU2 1555 aa29.64■■■□□ 2.34
FARP1-229ENST00000600190 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
FARP1-229ENST00000600190 ABCC3O15438 1527 aa29.62■■■□□ 2.33
FARP1-229ENST00000600190 EIF2AK4Q9P2K8 1649 aaKnown RBP29.6■■■□□ 2.33
FARP1-229ENST00000600190 ZC3H13Q5T200 1668 aaKnown RBP29.6■■■□□ 2.33
FARP1-229ENST00000600190 APLP2Q06481 763 aa29.59■■■□□ 2.33
FARP1-229ENST00000600190 SHANK2Q9UPX8 1470 aa29.59■■■□□ 2.33
FARP1-229ENST00000600190 SCAF1Q9H7N4 1312 aaKnown RBP29.57■■■□□ 2.32
FARP1-229ENST00000600190 CPS1P31327 1500 aa29.56■■■□□ 2.32
FARP1-229ENST00000600190 NPHP4O75161 1426 aaPredicted RBP29.55■■■□□ 2.32
FARP1-229ENST00000600190 DUOX2Q9NRD8 1548 aa29.55■■■□□ 2.32
FARP1-229ENST00000600190 MROH1Q8NDA8 1641 aa29.54■■■□□ 2.32
FARP1-229ENST00000600190 PIP4K2BP78356 416 aa29.54■■■□□ 2.32
FARP1-229ENST00000600190 CEP152O94986 1710 aa29.53■■■□□ 2.32
FARP1-229ENST00000600190 MED14O60244 1454 aa29.53■■■□□ 2.32
FARP1-229ENST00000600190 ERVK-7P63135 1459 aa29.53■■■□□ 2.32
FARP1-229ENST00000600190 DEPDC5O75140 1603 aa29.53■■■□□ 2.32
FARP1-229ENST00000600190 TOM1O60784 492 aa29.52■■■□□ 2.32
FARP1-229ENST00000600190 RRP7BPQ9NSQ0 103 aa29.52■■■□□ 2.32
FARP1-229ENST00000600190 CFAP65Q6ZU64 1925 aaKnown RBP29.51■■■□□ 2.32
FARP1-229ENST00000600190 SOCS7O14512 581 aa29.51■■■□□ 2.31
FARP1-229ENST00000600190 KIF15Q9NS87 1388 aa29.51■■■□□ 2.31
FARP1-229ENST00000600190 VWDEQ8N2E2 1590 aa29.5■■■□□ 2.31
FARP1-229ENST00000600190 ABCC5O15440 1437 aa29.49■■■□□ 2.31
FARP1-229ENST00000600190 PTPN23Q9H3S7 1636 aa29.49■■■□□ 2.31
FARP1-229ENST00000600190 IQGAP1P46940 1657 aa29.47■■■□□ 2.31
FARP1-229ENST00000600190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.47■■■□□ 2.312e-12■■■□□ 16.5
FARP1-229ENST00000600190 CROCC2H7BZ55 1655 aa29.45■■■□□ 2.31
FARP1-229ENST00000600190 HSPA1LP34931 641 aa29.45■■■□□ 2.31
FARP1-229ENST00000600190 ERBINQ96RT1 1412 aa29.44■■■□□ 2.3
FARP1-229ENST00000600190 DAPK1P53355 1430 aa29.42■■■□□ 2.3
FARP1-229ENST00000600190 UBR1Q8IWV7 1749 aa29.41■■■□□ 2.3
FARP1-229ENST00000600190 PRDM15P57071 1507 aaPredicted RBP29.4■■■□□ 2.3
FARP1-229ENST00000600190 CHIC2Q9UKJ5 165 aa29.4■■■□□ 2.3
FARP1-229ENST00000600190 FGD6Q6ZV73 1430 aa29.39■■■□□ 2.3
FARP1-229ENST00000600190 ARHGAP31Q2M1Z3 1444 aa29.38■■■□□ 2.29
FARP1-229ENST00000600190 KANK1Q14678 1352 aa29.37■■■□□ 2.29
FARP1-229ENST00000600190 TXNDC2Q86VQ3 553 aa29.36■■■□□ 2.29
FARP1-229ENST00000600190 STRCP1A6NGW2 1772 aa29.35■■■□□ 2.29
FARP1-229ENST00000600190 LTKP29376 864 aa29.35■■■□□ 2.29
FARP1-229ENST00000600190 SCAF11Q99590 1463 aaKnown RBP29.35■■■□□ 2.29
FARP1-229ENST00000600190 ANKRD30AQ9BXX3 1397 aa29.34■■■□□ 2.29
FARP1-229ENST00000600190 LRRC7Q96NW7 1537 aa29.32■■■□□ 2.28
FARP1-229ENST00000600190 STAG3Q9UJ98 1225 aa29.31■■■□□ 2.28
FARP1-229ENST00000600190 EID1Q9Y6B2 187 aa29.31■■■□□ 2.28
FARP1-229ENST00000600190 SLIT1O75093 1534 aa29.3■■■□□ 2.28
FARP1-229ENST00000600190 ARHGAP23Q9P227 1491 aa29.29■■■□□ 2.28
FARP1-229ENST00000600190 ALKQ9UM73 1620 aa29.29■■■□□ 2.28
FARP1-229ENST00000600190 PIK3C2BO00750 1634 aa29.27■■■□□ 2.28
FARP1-229ENST00000600190 SENP3Q9H4L4 574 aaPredicted RBP29.27■■■□□ 2.28
FARP1-229ENST00000600190 SYNMO15061 1565 aa29.26■■■□□ 2.27
FARP1-229ENST00000600190 IDI1Q13907 227 aa29.24■■■□□ 2.27
FARP1-229ENST00000600190 FAM50AQ14320 339 aaKnown RBP29.24■■■□□ 2.27
FARP1-229ENST00000600190 MED1Q15648 1581 aaPredicted RBP29.23■■■□□ 2.27
FARP1-229ENST00000600190 TMEM2Q9UHN6 1383 aa29.23■■■□□ 2.27
FARP1-229ENST00000600190 LMTK2Q8IWU2 1503 aa29.22■■■□□ 2.27
FARP1-229ENST00000600190 EFCAB6Q5THR3 1501 aa29.19■■■□□ 2.26
FARP1-229ENST00000600190 ADGRL2O95490 1459 aa29.16■■■□□ 2.26
FARP1-229ENST00000600190 KDM5AP29375 1690 aaKnown RBP29.15■■■□□ 2.26
FARP1-229ENST00000600190 PHF23Q9BUL5 403 aaPredicted RBP29.13■■■□□ 2.25
FARP1-229ENST00000600190 NOS1P29475 1434 aa29.12■■■□□ 2.25
FARP1-229ENST00000600190 ANKRD50Q9ULJ7 1429 aa29.11■■■□□ 2.25
FARP1-229ENST00000600190 SLC26A8Q96RN1 970 aa29.11■■■□□ 2.25
FARP1-229ENST00000600190 SLC52A1Q9NWF4 448 aa29.11■■■□□ 2.25
FARP1-229ENST00000600190 XIRP1Q702N8 1843 aaKnown RBP29.1■■■□□ 2.25
FARP1-229ENST00000600190 BCANQ96GW7 911 aa29.08■■■□□ 2.25
FARP1-229ENST00000600190 ADGRB3O60242 1522 aa29.07■■■□□ 2.24
FARP1-229ENST00000600190 KCNA6P17658 529 aa29.07■■■□□ 2.24
FARP1-229ENST00000600190 TET3O43151 1660 aa29.05■■■□□ 2.24
FARP1-229ENST00000600190 TMEM94Q12767 1356 aa29.04■■■□□ 2.24
FARP1-229ENST00000600190 PROSER2Q86WR7 435 aaPredicted RBP29.03■■■□□ 2.24
FARP1-229ENST00000600190 RBM33Q96EV2 1170 aaKnown RBP29.03■■■□□ 2.24
FARP1-229ENST00000600190 RPRD2Q5VT52 1461 aaKnown RBP29.03■■■□□ 2.24
FARP1-229ENST00000600190 FAM135BQ49AJ0 1406 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms