RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
SIN3B-210ENST00000599880 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
SIN3B-210ENST00000599880 ZC3H13Q5T200 1668 aaKnown RBP17.09■□□□□ 0.33
SIN3B-210ENST00000599880 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
SIN3B-210ENST00000599880 KIF3BO15066 747 aa17.06■□□□□ 0.32
SIN3B-210ENST00000599880 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
SIN3B-210ENST00000599880 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
SIN3B-210ENST00000599880 PZPP20742 1482 aa17.04■□□□□ 0.32
SIN3B-210ENST00000599880 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SIN3B-210ENST00000599880 DAPK1P53355 1430 aa17.04■□□□□ 0.32
SIN3B-210ENST00000599880 MROH1Q8NDA8 1641 aa17.03■□□□□ 0.32
SIN3B-210ENST00000599880 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
SIN3B-210ENST00000599880 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
SIN3B-210ENST00000599880 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
SIN3B-210ENST00000599880 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
SIN3B-210ENST00000599880 ERBINQ96RT1 1412 aa17■□□□□ 0.31
SIN3B-210ENST00000599880 ABCC3O15438 1527 aa17■□□□□ 0.31
SIN3B-210ENST00000599880 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
SIN3B-210ENST00000599880 DEPDC5O75140 1603 aa16.99■□□□□ 0.31
SIN3B-210ENST00000599880 CEP152O94986 1710 aa16.99■□□□□ 0.31
SIN3B-210ENST00000599880 PTPRTO14522 1441 aa16.99■□□□□ 0.31
SIN3B-210ENST00000599880 KIF15Q9NS87 1388 aa16.99■□□□□ 0.31
SIN3B-210ENST00000599880 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
SIN3B-210ENST00000599880 WASHC2CQ9Y4E1 1318 aa16.98■□□□□ 0.31
SIN3B-210ENST00000599880 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
SIN3B-210ENST00000599880 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
SIN3B-210ENST00000599880 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
SIN3B-210ENST00000599880 TNRQ92752 1358 aa16.94■□□□□ 0.3
SIN3B-210ENST00000599880 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
SIN3B-210ENST00000599880 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
SIN3B-210ENST00000599880 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
SIN3B-210ENST00000599880 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
SIN3B-210ENST00000599880 PKD2Q13563 968 aa16.9■□□□□ 0.3
SIN3B-210ENST00000599880 CFAP65Q6ZU64 1925 aaKnown RBP16.9■□□□□ 0.3
SIN3B-210ENST00000599880 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.3
SIN3B-210ENST00000599880 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
SIN3B-210ENST00000599880 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
SIN3B-210ENST00000599880 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
SIN3B-210ENST00000599880 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
SIN3B-210ENST00000599880 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
SIN3B-210ENST00000599880 UGGT1Q9NYU2 1555 aa16.88■□□□□ 0.29
SIN3B-210ENST00000599880 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
SIN3B-210ENST00000599880 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
SIN3B-210ENST00000599880 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
SIN3B-210ENST00000599880 KANK1Q14678 1352 aa16.86■□□□□ 0.29
SIN3B-210ENST00000599880 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
SIN3B-210ENST00000599880 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
SIN3B-210ENST00000599880 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
SIN3B-210ENST00000599880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.84■□□□□ 0.29
SIN3B-210ENST00000599880 IQSEC2Q5JU85 1478 aa16.84■□□□□ 0.29
SIN3B-210ENST00000599880 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
SIN3B-210ENST00000599880 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
SIN3B-210ENST00000599880 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
SIN3B-210ENST00000599880 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
SIN3B-210ENST00000599880 UNC13BO14795 1591 aa16.81■□□□□ 0.28
SIN3B-210ENST00000599880 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
SIN3B-210ENST00000599880 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
SIN3B-210ENST00000599880 MED14O60244 1454 aa16.8■□□□□ 0.28
SIN3B-210ENST00000599880 TET3O43151 1660 aa16.79■□□□□ 0.28
SIN3B-210ENST00000599880 GCC2Q8IWJ2 1684 aa16.79■□□□□ 0.28
SIN3B-210ENST00000599880 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
SIN3B-210ENST00000599880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.283e-8■■■□□ 18.8
SIN3B-210ENST00000599880 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
SIN3B-210ENST00000599880 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
SIN3B-210ENST00000599880 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
SIN3B-210ENST00000599880 SYNMO15061 1565 aa16.76■□□□□ 0.27
SIN3B-210ENST00000599880 SLIT1O75093 1534 aa16.75■□□□□ 0.27
SIN3B-210ENST00000599880 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
SIN3B-210ENST00000599880 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
SIN3B-210ENST00000599880 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
SIN3B-210ENST00000599880 NOS1P29475 1434 aa16.74■□□□□ 0.27
SIN3B-210ENST00000599880 ZNF335Q9H4Z2 1342 aaPredicted RBP16.73■□□□□ 0.27
SIN3B-210ENST00000599880 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
SIN3B-210ENST00000599880 CPS1P31327 1500 aa16.72■□□□□ 0.27
SIN3B-210ENST00000599880 SCAF11Q99590 1463 aaKnown RBP16.71■□□□□ 0.27
SIN3B-210ENST00000599880 E9PCH4 1651 aa16.7■□□□□ 0.26
SIN3B-210ENST00000599880 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
SIN3B-210ENST00000599880 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
SIN3B-210ENST00000599880 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
SIN3B-210ENST00000599880 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
SIN3B-210ENST00000599880 TMEM2Q9UHN6 1383 aa16.65■□□□□ 0.26
SIN3B-210ENST00000599880 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
SIN3B-210ENST00000599880 ITGAEP38570 1179 aa16.64■□□□□ 0.25
SIN3B-210ENST00000599880 IDI1Q13907 227 aa16.64■□□□□ 0.25
SIN3B-210ENST00000599880 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
SIN3B-210ENST00000599880 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
SIN3B-210ENST00000599880 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
SIN3B-210ENST00000599880 LTKP29376 864 aa16.61■□□□□ 0.25
SIN3B-210ENST00000599880 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
SIN3B-210ENST00000599880 SPHKAPQ2M3C7 1700 aa16.61■□□□□ 0.25
SIN3B-210ENST00000599880 NUP155O75694 1391 aa16.61■□□□□ 0.25
SIN3B-210ENST00000599880 NAIPQ13075 1403 aa16.59■□□□□ 0.25
SIN3B-210ENST00000599880 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
SIN3B-210ENST00000599880 ZFYVE9O95405 1425 aa16.57■□□□□ 0.24
SIN3B-210ENST00000599880 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
SIN3B-210ENST00000599880 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
SIN3B-210ENST00000599880 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
SIN3B-210ENST00000599880 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
SIN3B-210ENST00000599880 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
SIN3B-210ENST00000599880 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms