RNA–Protein interactions for RNA: ENST00000599872.1

SMIM7-218, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-218ENST00000599872 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
SMIM7-218ENST00000599872 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
SMIM7-218ENST00000599872 MED14O60244 1454 aa11.91□□□□□ -0.5
SMIM7-218ENST00000599872 A2MP01023 1474 aa11.91□□□□□ -0.5
SMIM7-218ENST00000599872 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-218ENST00000599872 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
SMIM7-218ENST00000599872 SYNMO15061 1565 aa11.89□□□□□ -0.51
SMIM7-218ENST00000599872 IQGAP1P46940 1657 aa11.89□□□□□ -0.51
SMIM7-218ENST00000599872 ATP7AQ04656 1500 aa11.88□□□□□ -0.51
SMIM7-218ENST00000599872 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
SMIM7-218ENST00000599872 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
SMIM7-218ENST00000599872 FAM135BQ49AJ0 1406 aa11.87□□□□□ -0.51
SMIM7-218ENST00000599872 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
SMIM7-218ENST00000599872 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
SMIM7-218ENST00000599872 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
SMIM7-218ENST00000599872 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
SMIM7-218ENST00000599872 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
SMIM7-218ENST00000599872 LRRIQ1Q96JM4 1722 aa11.84□□□□□ -0.51
SMIM7-218ENST00000599872 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
SMIM7-218ENST00000599872 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
SMIM7-218ENST00000599872 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
SMIM7-218ENST00000599872 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
SMIM7-218ENST00000599872 PZPP20742 1482 aa11.83□□□□□ -0.52
SMIM7-218ENST00000599872 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
SMIM7-218ENST00000599872 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
SMIM7-218ENST00000599872 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
SMIM7-218ENST00000599872 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
SMIM7-218ENST00000599872 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
SMIM7-218ENST00000599872 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 KIF3BO15066 747 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 RXRBP28702 533 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
SMIM7-218ENST00000599872 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 TMEM94Q12767 1356 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 JCADQ9P266 1359 aa11.79□□□□□ -0.52
SMIM7-218ENST00000599872 LRP6O75581 1613 aa11.78□□□□□ -0.52
SMIM7-218ENST00000599872 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
SMIM7-218ENST00000599872 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.52
SMIM7-218ENST00000599872 GPATCH8Q9UKJ3 1502 aaKnown RBP11.77□□□□□ -0.52
SMIM7-218ENST00000599872 LTKP29376 864 aa11.77□□□□□ -0.53
SMIM7-218ENST00000599872 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
SMIM7-218ENST00000599872 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
SMIM7-218ENST00000599872 KIAA1107Q9UPP5 1409 aa11.76□□□□□ -0.53
SMIM7-218ENST00000599872 PHLPP1O60346 1717 aa11.75□□□□□ -0.53
SMIM7-218ENST00000599872 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
SMIM7-218ENST00000599872 TXNDC2Q86VQ3 553 aa11.74□□□□□ -0.53
SMIM7-218ENST00000599872 ZNF644Q9H582 1327 aaPredicted RBP11.74□□□□□ -0.53
SMIM7-218ENST00000599872 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
SMIM7-218ENST00000599872 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
SMIM7-218ENST00000599872 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
SMIM7-218ENST00000599872 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
SMIM7-218ENST00000599872 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.53
SMIM7-218ENST00000599872 SLAIN2Q9P270 581 aa11.71□□□□□ -0.53
SMIM7-218ENST00000599872 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
SMIM7-218ENST00000599872 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
SMIM7-218ENST00000599872 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
SMIM7-218ENST00000599872 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-218ENST00000599872 EEA1Q15075 1411 aa11.7□□□□□ -0.54
SMIM7-218ENST00000599872 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
SMIM7-218ENST00000599872 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-218ENST00000599872 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-218ENST00000599872 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-218ENST00000599872 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-218ENST00000599872 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
SMIM7-218ENST00000599872 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
SMIM7-218ENST00000599872 RGS12O14924 1447 aa11.69□□□□□ -0.54
SMIM7-218ENST00000599872 CCNB3Q8WWL7 1395 aa11.68□□□□□ -0.54
SMIM7-218ENST00000599872 KCNA6P17658 529 aa11.68□□□□□ -0.54
SMIM7-218ENST00000599872 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
SMIM7-218ENST00000599872 ERVK-7P63135 1459 aa11.68□□□□□ -0.54
SMIM7-218ENST00000599872 AFF2P51816 1311 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 SLC26A8Q96RN1 970 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 MSH6P52701 1360 aa11.67□□□□□ -0.54
SMIM7-218ENST00000599872 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
SMIM7-218ENST00000599872 CFAP65Q6ZU64 1925 aaKnown RBP11.66□□□□□ -0.54
SMIM7-218ENST00000599872 EP400Q96L91 3159 aa11.65□□□□□ -0.54
SMIM7-218ENST00000599872 FGD6Q6ZV73 1430 aa11.65□□□□□ -0.54
SMIM7-218ENST00000599872 SLIT1O75093 1534 aa11.65□□□□□ -0.55
SMIM7-218ENST00000599872 PRDM15P57071 1507 aaPredicted RBP11.64□□□□□ -0.55
SMIM7-218ENST00000599872 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
SMIM7-218ENST00000599872 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
SMIM7-218ENST00000599872 ABCC3O15438 1527 aa11.63□□□□□ -0.55
SMIM7-218ENST00000599872 RBM6P78332 1123 aaKnown RBP11.62□□□□□ -0.55
SMIM7-218ENST00000599872 SHPRHQ149N8 1683 aa11.61□□□□□ -0.55
SMIM7-218ENST00000599872 ATAD2Q6PL18 1390 aa11.6□□□□□ -0.55
SMIM7-218ENST00000599872 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
SMIM7-218ENST00000599872 C8orf37Q96NL8 207 aa11.59□□□□□ -0.55
SMIM7-218ENST00000599872 NKTRP30414 1462 aaKnown RBP11.58□□□□□ -0.56
SMIM7-218ENST00000599872 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
SMIM7-218ENST00000599872 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SMIM7-218ENST00000599872 TET3O43151 1660 aa11.57□□□□□ -0.56
SMIM7-218ENST00000599872 BCANQ96GW7 911 aa11.57□□□□□ -0.56
SMIM7-218ENST00000599872 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
SMIM7-218ENST00000599872 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
SMIM7-218ENST00000599872 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
SMIM7-218ENST00000599872 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms