RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 KIF3BO15066 747 aa33.75■■■□□ 2.99
PNKP-212ENST00000599454 PZPP20742 1482 aa33.71■■■□□ 2.99
PNKP-212ENST00000599454 POLR1AO95602 1720 aaPredicted RBP33.71■■■□□ 2.99
PNKP-212ENST00000599454 VPS8Q8N3P4 1428 aa33.7■■■□□ 2.99
PNKP-212ENST00000599454 ZNF335Q9H4Z2 1342 aaPredicted RBP33.7■■■□□ 2.99
PNKP-212ENST00000599454 TSPY4P0CV99 314 aa33.68■■■□□ 2.98
PNKP-212ENST00000599454 TSPY10P0CW01 314 aa33.68■■■□□ 2.98
PNKP-212ENST00000599454 TNRQ92752 1358 aa33.68■■■□□ 2.98
PNKP-212ENST00000599454 DISP3Q9P2K9 1392 aa33.68■■■□□ 2.98
PNKP-212ENST00000599454 LRRC9Q6ZRR7 1453 aa33.68■■■□□ 2.98
PNKP-212ENST00000599454 WASHC2CQ9Y4E1 1318 aa33.65■■■□□ 2.98
PNKP-212ENST00000599454 MAST1Q9Y2H9 1570 aa33.64■■■□□ 2.98
PNKP-212ENST00000599454 MAP3K1Q13233 1512 aa33.63■■■□□ 2.97
PNKP-212ENST00000599454 SPATA31D1Q6ZQQ2 1576 aa33.61■■■□□ 2.97
PNKP-212ENST00000599454 FBXO31Q5XUX0 539 aaPredicted RBP33.61■■■□□ 2.97
PNKP-212ENST00000599454 RNF17Q9BXT8 1623 aaKnown RBP33.61■■■□□ 2.97
PNKP-212ENST00000599454 ZC3H13Q5T200 1668 aaKnown RBP33.58■■■□□ 2.97
PNKP-212ENST00000599454 NLRP1Q9C000 1473 aa33.58■■■□□ 2.97
PNKP-212ENST00000599454 NEURL4Q96JN8 1562 aa33.58■■■□□ 2.97
PNKP-212ENST00000599454 EIF2AK4Q9P2K8 1649 aaKnown RBP33.57■■■□□ 2.97
PNKP-212ENST00000599454 MIA2Q96PC5 1412 aa33.55■■■□□ 2.96
PNKP-212ENST00000599454 UBAP1LF5GYI3 381 aa33.55■■■□□ 2.96
PNKP-212ENST00000599454 THEMISQ8N1K5 641 aaPredicted RBP33.51■■■□□ 2.95
PNKP-212ENST00000599454 CPS1P31327 1500 aa33.51■■■□□ 2.95
PNKP-212ENST00000599454 MYOM3Q5VTT5 1437 aa33.51■■■□□ 2.95
PNKP-212ENST00000599454 UGGT1Q9NYU2 1555 aa33.51■■■□□ 2.95
PNKP-212ENST00000599454 DEPDC5O75140 1603 aa33.5■■■□□ 2.95
PNKP-212ENST00000599454 ABCC3O15438 1527 aa33.49■■■□□ 2.95
PNKP-212ENST00000599454 ANKLE2Q86XL3 938 aa33.49■■■□□ 2.95
PNKP-212ENST00000599454 LOC105371045A0A1W2PR82 267 aa33.48■■■□□ 2.95
PNKP-212ENST00000599454 ILDR2Q71H61 639 aa33.47■■■□□ 2.95
PNKP-212ENST00000599454 KANK4Q5T7N3 995 aaPredicted RBP33.46■■■□□ 2.95
PNKP-212ENST00000599454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.46■■■□□ 2.95
PNKP-212ENST00000599454 SHANK2Q9UPX8 1470 aa33.45■■■□□ 2.95
PNKP-212ENST00000599454 MED14O60244 1454 aa33.44■■■□□ 2.94
PNKP-212ENST00000599454 MROH1Q8NDA8 1641 aa33.43■■■□□ 2.94
PNKP-212ENST00000599454 CFAP65Q6ZU64 1925 aaKnown RBP33.42■■■□□ 2.94
PNKP-212ENST00000599454 DUOX2Q9NRD8 1548 aa33.42■■■□□ 2.94
PNKP-212ENST00000599454 CEP152O94986 1710 aa33.42■■■□□ 2.94
PNKP-212ENST00000599454 IQGAP1P46940 1657 aa33.39■■■□□ 2.94
PNKP-212ENST00000599454 VWDEQ8N2E2 1590 aa33.39■■■□□ 2.94
PNKP-212ENST00000599454 NPHP4O75161 1426 aaPredicted RBP33.39■■■□□ 2.94
PNKP-212ENST00000599454 SOCS7O14512 581 aa33.39■■■□□ 2.94
PNKP-212ENST00000599454 ERVK-7P63135 1459 aa33.38■■■□□ 2.93
PNKP-212ENST00000599454 CROCC2H7BZ55 1655 aa33.38■■■□□ 2.93
PNKP-212ENST00000599454 TOM1O60784 492 aa33.33■■■□□ 2.93
PNKP-212ENST00000599454 PTPN23Q9H3S7 1636 aa33.31■■■□□ 2.92
PNKP-212ENST00000599454 UBR1Q8IWV7 1749 aa33.31■■■□□ 2.92
PNKP-212ENST00000599454 PRDM15P57071 1507 aaPredicted RBP33.3■■■□□ 2.92
PNKP-212ENST00000599454 KIF15Q9NS87 1388 aa33.29■■■□□ 2.92
PNKP-212ENST00000599454 ERBINQ96RT1 1412 aa33.28■■■□□ 2.92
PNKP-212ENST00000599454 APLP2Q06481 763 aa33.26■■■□□ 2.91
PNKP-212ENST00000599454 ABCC5O15440 1437 aa33.26■■■□□ 2.91
PNKP-212ENST00000599454 ARHGAP31Q2M1Z3 1444 aa33.26■■■□□ 2.91
PNKP-212ENST00000599454 SCAF1Q9H7N4 1312 aaKnown RBP33.24■■■□□ 2.91
PNKP-212ENST00000599454 STRCP1A6NGW2 1772 aa33.23■■■□□ 2.91
PNKP-212ENST00000599454 SYNMO15061 1565 aa33.22■■■□□ 2.91
PNKP-212ENST00000599454 PIP4K2BP78356 416 aa33.22■■■□□ 2.91
PNKP-212ENST00000599454 DAPK1P53355 1430 aa33.19■■■□□ 2.9
PNKP-212ENST00000599454 HSPA1LP34931 641 aa33.19■■■□□ 2.9
PNKP-212ENST00000599454 SCAF11Q99590 1463 aaKnown RBP33.18■■■□□ 2.9
PNKP-212ENST00000599454 SLIT1O75093 1534 aa33.18■■■□□ 2.9
PNKP-212ENST00000599454 RRP7BPQ9NSQ0 103 aa33.17■■■□□ 2.9
PNKP-212ENST00000599454 FGD6Q6ZV73 1430 aa33.17■■■□□ 2.9
PNKP-212ENST00000599454 ARHGAP23Q9P227 1491 aa33.17■■■□□ 2.9
PNKP-212ENST00000599454 ALKQ9UM73 1620 aa33.15■■■□□ 2.9
PNKP-212ENST00000599454 LRRC7Q96NW7 1537 aa33.14■■■□□ 2.9
PNKP-212ENST00000599454 KANK1Q14678 1352 aa33.14■■■□□ 2.9
PNKP-212ENST00000599454 KDM5AP29375 1690 aaKnown RBP33.12■■■□□ 2.89
PNKP-212ENST00000599454 PIK3C2BO00750 1634 aa33.11■■■□□ 2.89
PNKP-212ENST00000599454 MED1Q15648 1581 aaPredicted RBP33.11■■■□□ 2.89
PNKP-212ENST00000599454 ANKRD30AQ9BXX3 1397 aa33.1■■■□□ 2.89
PNKP-212ENST00000599454 LMTK2Q8IWU2 1503 aa33.09■■■□□ 2.89
PNKP-212ENST00000599454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.08■■■□□ 2.891e-7■■■■□ 24.4
PNKP-212ENST00000599454 TXNDC2Q86VQ3 553 aa33.07■■■□□ 2.88
PNKP-212ENST00000599454 LTKP29376 864 aa33.06■■■□□ 2.88
PNKP-212ENST00000599454 EID1Q9Y6B2 187 aa33.06■■■□□ 2.88
PNKP-212ENST00000599454 TMEM2Q9UHN6 1383 aa33.01■■■□□ 2.88
PNKP-212ENST00000599454 XIRP1Q702N8 1843 aaKnown RBP33■■■□□ 2.87
PNKP-212ENST00000599454 EFCAB6Q5THR3 1501 aa33■■■□□ 2.87
PNKP-212ENST00000599454 STAG3Q9UJ98 1225 aa32.99■■■□□ 2.87
PNKP-212ENST00000599454 CHIC2Q9UKJ5 165 aa32.99■■■□□ 2.87
PNKP-212ENST00000599454 ADGRL2O95490 1459 aa32.99■■■□□ 2.87
PNKP-212ENST00000599454 NOS1P29475 1434 aa32.93■■■□□ 2.86
PNKP-212ENST00000599454 IDI1Q13907 227 aa32.92■■■□□ 2.86
PNKP-212ENST00000599454 ADGRB3O60242 1522 aa32.9■■■□□ 2.86
PNKP-212ENST00000599454 RPRD2Q5VT52 1461 aaKnown RBP32.87■■■□□ 2.85
PNKP-212ENST00000599454 TET3O43151 1660 aa32.86■■■□□ 2.85
PNKP-212ENST00000599454 SLC52A1Q9NWF4 448 aa32.86■■■□□ 2.85
PNKP-212ENST00000599454 PHF23Q9BUL5 403 aaPredicted RBP32.85■■■□□ 2.85
PNKP-212ENST00000599454 ANKRD50Q9ULJ7 1429 aa32.85■■■□□ 2.85
PNKP-212ENST00000599454 FAM50AQ14320 339 aaKnown RBP32.82■■■□□ 2.84
PNKP-212ENST00000599454 KCNA6P17658 529 aa32.81■■■□□ 2.84
PNKP-212ENST00000599454 GCC2Q8IWJ2 1684 aa32.8■■■□□ 2.84
PNKP-212ENST00000599454 MYO5BQ9ULV0 1848 aa32.79■■■□□ 2.84
PNKP-212ENST00000599454 SENP3Q9H4L4 574 aaPredicted RBP32.77■■■□□ 2.84
PNKP-212ENST00000599454 TMEM94Q12767 1356 aa32.77■■■□□ 2.84
PNKP-212ENST00000599454 NWD1Q149M9 1564 aa32.77■■■□□ 2.84
PNKP-212ENST00000599454 FAM135BQ49AJ0 1406 aa32.77■■■□□ 2.84
PNKP-212ENST00000599454 NKTRP30414 1462 aaKnown RBP32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms