RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
EBI3-202ENST00000599339 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
EBI3-202ENST00000599339 LTBP4Q8N2S1 1624 aa23.1■■□□□ 1.29
EBI3-202ENST00000599339 IQSEC2Q5JU85 1478 aa23.1■■□□□ 1.29
EBI3-202ENST00000599339 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.29
EBI3-202ENST00000599339 A2ML1A8K2U0 1454 aa23.08■■□□□ 1.29
EBI3-202ENST00000599339 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
EBI3-202ENST00000599339 PZPP20742 1482 aa23.05■■□□□ 1.28
EBI3-202ENST00000599339 TNRQ92752 1358 aa23.05■■□□□ 1.28
EBI3-202ENST00000599339 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
EBI3-202ENST00000599339 MAST1Q9Y2H9 1570 aa23.03■■□□□ 1.28
EBI3-202ENST00000599339 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
EBI3-202ENST00000599339 DNMT1P26358 1616 aaKnown RBP23.02■■□□□ 1.28
EBI3-202ENST00000599339 KANK4Q5T7N3 995 aaPredicted RBP23.02■■□□□ 1.28
EBI3-202ENST00000599339 FBXO31Q5XUX0 539 aaPredicted RBP23.01■■□□□ 1.27
EBI3-202ENST00000599339 APLP2Q06481 763 aa23■■□□□ 1.27
EBI3-202ENST00000599339 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
EBI3-202ENST00000599339 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
EBI3-202ENST00000599339 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
EBI3-202ENST00000599339 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
EBI3-202ENST00000599339 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
EBI3-202ENST00000599339 THEMISQ8N1K5 641 aaPredicted RBP22.94■■□□□ 1.26
EBI3-202ENST00000599339 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
EBI3-202ENST00000599339 ANKLE2Q86XL3 938 aa22.92■■□□□ 1.26
EBI3-202ENST00000599339 ABCC3O15438 1527 aa22.92■■□□□ 1.26
EBI3-202ENST00000599339 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
EBI3-202ENST00000599339 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
EBI3-202ENST00000599339 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
EBI3-202ENST00000599339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.26
EBI3-202ENST00000599339 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
EBI3-202ENST00000599339 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
EBI3-202ENST00000599339 NEURL4Q96JN8 1562 aa22.88■■□□□ 1.25
EBI3-202ENST00000599339 PTPN23Q9H3S7 1636 aa22.87■■□□□ 1.25
EBI3-202ENST00000599339 SPATA31D1Q6ZQQ2 1576 aa22.87■■□□□ 1.25
EBI3-202ENST00000599339 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
EBI3-202ENST00000599339 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
EBI3-202ENST00000599339 CPS1P31327 1500 aa22.85■■□□□ 1.25
EBI3-202ENST00000599339 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
EBI3-202ENST00000599339 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
EBI3-202ENST00000599339 ABCC5O15440 1437 aa22.83■■□□□ 1.25
EBI3-202ENST00000599339 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
EBI3-202ENST00000599339 DEPDC5O75140 1603 aa22.83■■□□□ 1.25
EBI3-202ENST00000599339 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
EBI3-202ENST00000599339 CEP152O94986 1710 aa22.82■■□□□ 1.24
EBI3-202ENST00000599339 MED14O60244 1454 aa22.82■■□□□ 1.24
EBI3-202ENST00000599339 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
EBI3-202ENST00000599339 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
EBI3-202ENST00000599339 DAPK1P53355 1430 aa22.81■■□□□ 1.24
EBI3-202ENST00000599339 PRDM15P57071 1507 aaPredicted RBP22.8■■□□□ 1.24
EBI3-202ENST00000599339 KANK1Q14678 1352 aa22.77■■□□□ 1.24
EBI3-202ENST00000599339 ARHGAP31Q2M1Z3 1444 aa22.77■■□□□ 1.24
EBI3-202ENST00000599339 IQGAP1P46940 1657 aa22.77■■□□□ 1.24
EBI3-202ENST00000599339 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
EBI3-202ENST00000599339 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
EBI3-202ENST00000599339 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
EBI3-202ENST00000599339 TOM1O60784 492 aa22.75■■□□□ 1.23
EBI3-202ENST00000599339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
EBI3-202ENST00000599339 UBR1Q8IWV7 1749 aa22.72■■□□□ 1.23
EBI3-202ENST00000599339 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
EBI3-202ENST00000599339 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
EBI3-202ENST00000599339 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
EBI3-202ENST00000599339 PIP4K2BP78356 416 aa22.68■■□□□ 1.22
EBI3-202ENST00000599339 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
EBI3-202ENST00000599339 SLIT1O75093 1534 aa22.67■■□□□ 1.22
EBI3-202ENST00000599339 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
EBI3-202ENST00000599339 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
EBI3-202ENST00000599339 LMTK2Q8IWU2 1503 aa22.66■■□□□ 1.22
EBI3-202ENST00000599339 ARHGAP23Q9P227 1491 aa22.66■■□□□ 1.22
EBI3-202ENST00000599339 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
EBI3-202ENST00000599339 SYNMO15061 1565 aa22.64■■□□□ 1.22
EBI3-202ENST00000599339 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
EBI3-202ENST00000599339 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
EBI3-202ENST00000599339 PIK3C2BO00750 1634 aa22.62■■□□□ 1.21
EBI3-202ENST00000599339 SOCS7O14512 581 aa22.62■■□□□ 1.21
EBI3-202ENST00000599339 HSPA1LP34931 641 aa22.62■■□□□ 1.21
EBI3-202ENST00000599339 LTKP29376 864 aa22.61■■□□□ 1.21
EBI3-202ENST00000599339 LRRC7Q96NW7 1537 aa22.61■■□□□ 1.21
EBI3-202ENST00000599339 KDM5AP29375 1690 aaKnown RBP22.6■■□□□ 1.21
EBI3-202ENST00000599339 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
EBI3-202ENST00000599339 TMEM2Q9UHN6 1383 aa22.6■■□□□ 1.21
EBI3-202ENST00000599339 EFCAB6Q5THR3 1501 aa22.58■■□□□ 1.21
EBI3-202ENST00000599339 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
EBI3-202ENST00000599339 IDI1Q13907 227 aa22.56■■□□□ 1.2
EBI3-202ENST00000599339 NOS1P29475 1434 aa22.55■■□□□ 1.2
EBI3-202ENST00000599339 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
EBI3-202ENST00000599339 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
EBI3-202ENST00000599339 RPRD2Q5VT52 1461 aaKnown RBP22.53■■□□□ 1.2
EBI3-202ENST00000599339 ADGRB3O60242 1522 aa22.52■■□□□ 1.19
EBI3-202ENST00000599339 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
EBI3-202ENST00000599339 TET3O43151 1660 aa22.48■■□□□ 1.19
EBI3-202ENST00000599339 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
EBI3-202ENST00000599339 UNC13BO14795 1591 aa22.44■■□□□ 1.18
EBI3-202ENST00000599339 KCNA6P17658 529 aa22.44■■□□□ 1.18
EBI3-202ENST00000599339 BCANQ96GW7 911 aa22.44■■□□□ 1.18
EBI3-202ENST00000599339 GCC2Q8IWJ2 1684 aa22.43■■□□□ 1.18
EBI3-202ENST00000599339 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
EBI3-202ENST00000599339 SLC26A8Q96RN1 970 aa22.43■■□□□ 1.18
EBI3-202ENST00000599339 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
EBI3-202ENST00000599339 XIRP1Q702N8 1843 aaKnown RBP22.42■■□□□ 1.18
EBI3-202ENST00000599339 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms