RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PZPP20742 1482 aa23.43■■□□□ 1.34
IRF3-223ENST00000599223 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
IRF3-223ENST00000599223 RNF17Q9BXT8 1623 aaKnown RBP23.43■■□□□ 1.34
IRF3-223ENST00000599223 POLR1AO95602 1720 aaPredicted RBP23.42■■□□□ 1.34
IRF3-223ENST00000599223 KIF3BO15066 747 aa23.42■■□□□ 1.34
IRF3-223ENST00000599223 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
IRF3-223ENST00000599223 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
IRF3-223ENST00000599223 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
IRF3-223ENST00000599223 ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.34
IRF3-223ENST00000599223 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
IRF3-223ENST00000599223 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
IRF3-223ENST00000599223 TNRQ92752 1358 aa23.38■■□□□ 1.33
IRF3-223ENST00000599223 FBXO31Q5XUX0 539 aaPredicted RBP23.37■■□□□ 1.33
IRF3-223ENST00000599223 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
IRF3-223ENST00000599223 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
IRF3-223ENST00000599223 ZC3H13Q5T200 1668 aaKnown RBP23.35■■□□□ 1.33
IRF3-223ENST00000599223 ABCC3O15438 1527 aa23.35■■□□□ 1.33
IRF3-223ENST00000599223 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
IRF3-223ENST00000599223 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
IRF3-223ENST00000599223 PKD2Q13563 968 aa23.34■■□□□ 1.33
IRF3-223ENST00000599223 CEP152O94986 1710 aa23.33■■□□□ 1.32
IRF3-223ENST00000599223 MIA2Q96PC5 1412 aa23.32■■□□□ 1.32
IRF3-223ENST00000599223 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
IRF3-223ENST00000599223 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
IRF3-223ENST00000599223 TSPY4P0CV99 314 aa23.28■■□□□ 1.32
IRF3-223ENST00000599223 TSPY10P0CW01 314 aa23.28■■□□□ 1.32
IRF3-223ENST00000599223 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
IRF3-223ENST00000599223 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
IRF3-223ENST00000599223 UGGT1Q9NYU2 1555 aa23.26■■□□□ 1.31
IRF3-223ENST00000599223 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
IRF3-223ENST00000599223 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
IRF3-223ENST00000599223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.24■■□□□ 1.313e-6■□□□□ 11.3
IRF3-223ENST00000599223 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
IRF3-223ENST00000599223 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
IRF3-223ENST00000599223 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
IRF3-223ENST00000599223 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
IRF3-223ENST00000599223 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
IRF3-223ENST00000599223 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
IRF3-223ENST00000599223 ABCC5O15440 1437 aa23.21■■□□□ 1.31
IRF3-223ENST00000599223 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
IRF3-223ENST00000599223 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
IRF3-223ENST00000599223 MED14O60244 1454 aa23.18■■□□□ 1.3
IRF3-223ENST00000599223 KIF15Q9NS87 1388 aa23.18■■□□□ 1.3
IRF3-223ENST00000599223 CPS1P31327 1500 aa23.18■■□□□ 1.3
IRF3-223ENST00000599223 STRCP1A6NGW2 1772 aa23.17■■□□□ 1.3
IRF3-223ENST00000599223 DAPK1P53355 1430 aa23.16■■□□□ 1.3
IRF3-223ENST00000599223 UBAP1LF5GYI3 381 aa23.16■■□□□ 1.3
IRF3-223ENST00000599223 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
IRF3-223ENST00000599223 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
IRF3-223ENST00000599223 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
IRF3-223ENST00000599223 ILDR2Q71H61 639 aa23.15■■□□□ 1.3
IRF3-223ENST00000599223 ALKQ9UM73 1620 aa23.12■■□□□ 1.29
IRF3-223ENST00000599223 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
IRF3-223ENST00000599223 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
IRF3-223ENST00000599223 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
IRF3-223ENST00000599223 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
IRF3-223ENST00000599223 PIK3C2BO00750 1634 aa23.08■■□□□ 1.28
IRF3-223ENST00000599223 SYNMO15061 1565 aa23.06■■□□□ 1.28
IRF3-223ENST00000599223 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
IRF3-223ENST00000599223 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
IRF3-223ENST00000599223 SLIT1O75093 1534 aa23.04■■□□□ 1.28
IRF3-223ENST00000599223 APLP2Q06481 763 aa23.03■■□□□ 1.28
IRF3-223ENST00000599223 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
IRF3-223ENST00000599223 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
IRF3-223ENST00000599223 ADGRL2O95490 1459 aa23■■□□□ 1.27
IRF3-223ENST00000599223 EFCAB6Q5THR3 1501 aa23■■□□□ 1.27
IRF3-223ENST00000599223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.275e-6■■■□□ 18.6
IRF3-223ENST00000599223 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
IRF3-223ENST00000599223 ANKRD30AQ9BXX3 1397 aa22.99■■□□□ 1.27
IRF3-223ENST00000599223 KDM5AP29375 1690 aaKnown RBP22.98■■□□□ 1.27
IRF3-223ENST00000599223 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
IRF3-223ENST00000599223 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
IRF3-223ENST00000599223 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
IRF3-223ENST00000599223 HSPA1LP34931 641 aa22.97■■□□□ 1.27
IRF3-223ENST00000599223 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
IRF3-223ENST00000599223 LTKP29376 864 aa22.96■■□□□ 1.27
IRF3-223ENST00000599223 KANK1Q14678 1352 aa22.94■■□□□ 1.26
IRF3-223ENST00000599223 TOM1O60784 492 aa22.93■■□□□ 1.26
IRF3-223ENST00000599223 SOCS7O14512 581 aa22.92■■□□□ 1.26
IRF3-223ENST00000599223 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
IRF3-223ENST00000599223 NOS1P29475 1434 aa22.91■■□□□ 1.26
IRF3-223ENST00000599223 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
IRF3-223ENST00000599223 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
IRF3-223ENST00000599223 MYO5BQ9ULV0 1848 aa22.89■■□□□ 1.25
IRF3-223ENST00000599223 TET3O43151 1660 aa22.87■■□□□ 1.25
IRF3-223ENST00000599223 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
IRF3-223ENST00000599223 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
IRF3-223ENST00000599223 UNC13BO14795 1591 aa22.87■■□□□ 1.25
IRF3-223ENST00000599223 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
IRF3-223ENST00000599223 IDI1Q13907 227 aa22.85■■□□□ 1.25
IRF3-223ENST00000599223 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
IRF3-223ENST00000599223 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
IRF3-223ENST00000599223 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
IRF3-223ENST00000599223 E9PCH4 1651 aa22.8■■□□□ 1.24
IRF3-223ENST00000599223 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
IRF3-223ENST00000599223 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
IRF3-223ENST00000599223 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
IRF3-223ENST00000599223 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
IRF3-223ENST00000599223 IQGAP3Q86VI3 1631 aa22.76■■□□□ 1.23
IRF3-223ENST00000599223 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms