RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	JPH4	Q96JJ6	628 aa		14.09	□□□□□ -0.15
SOX2-OT-231	ENST00000599082	RNF166	Q96A37	237 aa	Predicted RBP	14.08	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	KRI1	Q8N9T8	703 aa	Known RBP	14.07	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	FCHSD2	O94868	740 aa		14.06	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	FOSB	P53539	338 aa		14.06	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	TYW1B	Q6NUM6	668 aa		14.06	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	PTGDR	Q13258	359 aa		14.05	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	RBM33	Q96EV2	1170 aa	Known RBP	14.05	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	MAP3K7	O43318	606 aa		14.04	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	HIC1	Q14526	733 aa		14.04	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	AK7	Q96M32	723 aa		14.04	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	CDHR5	Q9HBB8	845 aa		14.04	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	GNPAT	O15228	680 aa		14.03	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	BRPF1	P55201	1214 aa	Predicted RBP	14.03	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	FBXW7	Q969H0	707 aa		14.03	□□□□□ -0.16
SOX2-OT-231	ENST00000599082	VARS2	Q5ST30	1063 aa	Known RBP	14.02	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	ZNF454	Q8N9F8	522 aa		14.02	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	TSR1	Q2NL82	804 aa	Known RBP	14.01	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	FECH	P22830	423 aa		14	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	NPDC1	Q9NQX5	325 aa	Predicted RBP	14	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.99	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	MAP2K5	Q13163	448 aa		13.99	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	ZDHHC16	Q969W1	377 aa		13.99	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	LHX6	Q9UPM6	363 aa		13.99	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	MYT1L	Q9UL68	1186 aa		13.98	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	NEUROD2	Q15784	382 aa		13.96	□□□□□ -0.17
SOX2-OT-231	ENST00000599082	TRIM66	O15016	1216 aa		13.95	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	ADAM33	Q9BZ11	813 aa		13.95	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	IRF6	O14896	467 aa		13.94	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	C6orf132	Q5T0Z8	1188 aa		13.94	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	CCDC102A	Q96A19	550 aa		13.94	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	ZNF687	Q8N1G0	1237 aa		13.92	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	PSD	A5PKW4	1024 aa	Predicted RBP	13.9	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	PPP4R3B	Q5MIZ7	849 aa		13.9	□□□□□ -0.18
SOX2-OT-231	ENST00000599082	PDE4D	Q08499	809 aa		13.88	□□□□□ -0.19
SOX2-OT-231	ENST00000599082	CERK	Q8TCT0	537 aa		13.88	□□□□□ -0.19
SOX2-OT-231	ENST00000599082	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.86	□□□□□ -0.19
SOX2-OT-231	ENST00000599082	TMEM132A	Q24JP5	1023 aa		13.85	□□□□□ -0.19
SOX2-OT-231	ENST00000599082	BCL2L12	Q9HB09	334 aa		13.85	□□□□□ -0.19
SOX2-OT-231	ENST00000599082	AMHR2	Q16671	573 aa		13.83	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	PADI6	Q6TGC4	694 aa		13.82	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	KDM4C	Q9H3R0	1056 aa		13.81	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	COL9A1	P20849	921 aa		13.8	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	TTC13	Q8NBP0	860 aa		13.8	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	RBM27	Q9P2N5	1060 aa	Known RBP	13.8	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	PTPRE	P23469	700 aa		13.78	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	PRSS12	P56730	875 aa		13.78	□□□□□ -0.2
SOX2-OT-231	ENST00000599082	CDCA7L	Q96GN5	454 aa		13.77	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	FAM161A	Q3B820	660 aa		13.76	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	PARP9	Q8IXQ6	854 aa		13.76	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	PPP1R3G	B7ZBB8	358 aa		13.75	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	PHOX2B	Q99453	314 aa		13.75	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	ADGRG1	Q9Y653	693 aa		13.75	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	ANKRD13D	Q6ZTN6	518 aa		13.74	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	FAM198A	Q9UFP1	575 aa		13.73	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	METTL3	Q86U44	580 aa	Known RBP	13.72	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	OAT	P04181	439 aa		13.71	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	TTLL12	Q14166	644 aa	Predicted RBP	13.71	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	KCNK17	Q96T54	332 aa		13.71	□□□□□ -0.21
SOX2-OT-231	ENST00000599082	PXYLP1	Q8TE99	480 aa		13.7	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	REPIN1	Q9BWE0	567 aa	Known RBP	13.7	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	TSKS	Q9UJT2	592 aa		13.7	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	LSM11	P83369	360 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	TMUB1	Q9BVT8	246 aa		13.68	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	IL27	Q8NEV9	243 aa		13.67	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	TRIM6-TRIM34	B2RNG4	842 aa		13.66	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	MDM2	Q00987	491 aa	Predicted RBP	13.66	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	POTEE	Q6S8J3	1075 aa		13.66	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.66	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	FAM117A	Q9C073	453 aa		13.66	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	CLCN1	P35523	988 aa		13.65	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	PSEN2	P49810	448 aa		13.65	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	KCNH8	Q96L42	1107 aa		13.65	□□□□□ -0.22
SOX2-OT-231	ENST00000599082	PROX2	Q3B8N5	592 aa		13.64	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	RBM46	Q8TBY0	533 aa	Known RBP	13.64	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	NLRP7	Q8WX94	980 aa		13.64	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	GPCPD1	Q9NPB8	672 aa		13.64	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	C3orf80	F5H4A9	247 aa		13.63	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	EYA1	Q99502	592 aa		13.63	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	DAXX	Q9UER7	740 aa	Predicted RBP	13.63	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	ARHGAP33	O14559	1287 aa		13.62	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	ZBED2	Q9BTP6	218 aa		13.62	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	ONECUT3	O60422	494 aa	Predicted RBP	13.61	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	MS4A1	P11836	297 aa		13.61	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	PACS2	Q86VP3	889 aa		13.61	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	GTF3C3	Q9Y5Q9	886 aa		13.61	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	PLEKHG3	A1L390	1219 aa		13.6	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	NUDT18	Q6ZVK8	323 aa		13.6	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	DDRGK1	Q96HY6	314 aa		13.6	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	AXIN2	Q9Y2T1	843 aa		13.6	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	NBPF26	B4DH59	902 aa		13.59	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	TATDN2	Q93075	761 aa		13.59	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	PNMA3	Q9UL41	463 aa		13.59	□□□□□ -0.23
SOX2-OT-231	ENST00000599082	DMRTA1	Q5VZB9	504 aa		13.58	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	RCCD1	A6NED2	376 aa		13.57	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	PBX2	P40425	430 aa		13.57	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	SSTR3	P32745	418 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	SLC4A5	Q9BY07	1137 aa		13.56	□□□□□ -0.24
SOX2-OT-231	ENST00000599082	KIAA1468	Q9P260	1216 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms