RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
SMG9-208ENST00000598886 KANK4Q5T7N3 995 aaPredicted RBP25.01■■□□□ 1.59
SMG9-208ENST00000598886 RSPH4AQ5TD94 716 aa25.01■■□□□ 1.59
SMG9-208ENST00000598886 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
SMG9-208ENST00000598886 EIF2AK4Q9P2K8 1649 aaKnown RBP25.01■■□□□ 1.59
SMG9-208ENST00000598886 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
SMG9-208ENST00000598886 PZPP20742 1482 aa25■■□□□ 1.59
SMG9-208ENST00000598886 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
SMG9-208ENST00000598886 A2ML1A8K2U0 1454 aa24.99■■□□□ 1.59
SMG9-208ENST00000598886 MIA2Q96PC5 1412 aa24.98■■□□□ 1.59
SMG9-208ENST00000598886 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
SMG9-208ENST00000598886 ZC3H13Q5T200 1668 aaKnown RBP24.97■■□□□ 1.59
SMG9-208ENST00000598886 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
SMG9-208ENST00000598886 NEURL4Q96JN8 1562 aa24.94■■□□□ 1.58
SMG9-208ENST00000598886 KIF3BO15066 747 aa24.94■■□□□ 1.58
SMG9-208ENST00000598886 ABCC3O15438 1527 aa24.92■■□□□ 1.58
SMG9-208ENST00000598886 NCKAP5LQ9HCH0 1330 aa24.91■■□□□ 1.58
SMG9-208ENST00000598886 CEP152O94986 1710 aa24.89■■□□□ 1.58
SMG9-208ENST00000598886 TNRQ92752 1358 aa24.89■■□□□ 1.57
SMG9-208ENST00000598886 PTPN23Q9H3S7 1636 aa24.89■■□□□ 1.57
SMG9-208ENST00000598886 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
SMG9-208ENST00000598886 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
SMG9-208ENST00000598886 PKD2Q13563 968 aa24.87■■□□□ 1.57
SMG9-208ENST00000598886 SHANK2Q9UPX8 1470 aa24.87■■□□□ 1.57
SMG9-208ENST00000598886 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
SMG9-208ENST00000598886 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
SMG9-208ENST00000598886 DUOX2Q9NRD8 1548 aa24.86■■□□□ 1.57
SMG9-208ENST00000598886 PRDM15P57071 1507 aaPredicted RBP24.84■■□□□ 1.57
SMG9-208ENST00000598886 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
SMG9-208ENST00000598886 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
SMG9-208ENST00000598886 ABCC5O15440 1437 aa24.83■■□□□ 1.57
SMG9-208ENST00000598886 ZNF335Q9H4Z2 1342 aaPredicted RBP24.83■■□□□ 1.56
SMG9-208ENST00000598886 WASHC2CQ9Y4E1 1318 aa24.83■■□□□ 1.56
SMG9-208ENST00000598886 ERVK-7P63135 1459 aa24.79■■□□□ 1.56
SMG9-208ENST00000598886 UGGT1Q9NYU2 1555 aa24.79■■□□□ 1.56
SMG9-208ENST00000598886 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
SMG9-208ENST00000598886 DAPK1P53355 1430 aa24.77■■□□□ 1.56
SMG9-208ENST00000598886 UBR1Q8IWV7 1749 aa24.76■■□□□ 1.55
SMG9-208ENST00000598886 ERBINQ96RT1 1412 aa24.76■■□□□ 1.55
SMG9-208ENST00000598886 MED14O60244 1454 aa24.76■■□□□ 1.55
SMG9-208ENST00000598886 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
SMG9-208ENST00000598886 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
SMG9-208ENST00000598886 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
SMG9-208ENST00000598886 IQGAP1P46940 1657 aa24.72■■□□□ 1.55
SMG9-208ENST00000598886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.72■■□□□ 1.55
SMG9-208ENST00000598886 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.55
SMG9-208ENST00000598886 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
SMG9-208ENST00000598886 CPS1P31327 1500 aa24.68■■□□□ 1.54
SMG9-208ENST00000598886 LMTK2Q8IWU2 1503 aa24.66■■□□□ 1.54
SMG9-208ENST00000598886 ADGRL2O95490 1459 aa24.65■■□□□ 1.54
SMG9-208ENST00000598886 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
SMG9-208ENST00000598886 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
SMG9-208ENST00000598886 THEMISQ8N1K5 641 aaPredicted RBP24.64■■□□□ 1.54
SMG9-208ENST00000598886 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
SMG9-208ENST00000598886 ARHGAP23Q9P227 1491 aa24.63■■□□□ 1.53
SMG9-208ENST00000598886 KDM5AP29375 1690 aaKnown RBP24.62■■□□□ 1.53
SMG9-208ENST00000598886 SLIT1O75093 1534 aa24.62■■□□□ 1.53
SMG9-208ENST00000598886 ANKLE2Q86XL3 938 aa24.61■■□□□ 1.53
SMG9-208ENST00000598886 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
SMG9-208ENST00000598886 APLP2Q06481 763 aa24.6■■□□□ 1.53
SMG9-208ENST00000598886 SYNMO15061 1565 aa24.59■■□□□ 1.53
SMG9-208ENST00000598886 EFCAB6Q5THR3 1501 aa24.59■■□□□ 1.53
SMG9-208ENST00000598886 ANKRD30AQ9BXX3 1397 aa24.57■■□□□ 1.52
SMG9-208ENST00000598886 UBAP1LF5GYI3 381 aa24.55■■□□□ 1.52
SMG9-208ENST00000598886 SCAF11Q99590 1463 aaKnown RBP24.55■■□□□ 1.52
SMG9-208ENST00000598886 XIRP1Q702N8 1843 aaKnown RBP24.52■■□□□ 1.52
SMG9-208ENST00000598886 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
SMG9-208ENST00000598886 LRRC7Q96NW7 1537 aa24.51■■□□□ 1.51
SMG9-208ENST00000598886 CHIC2Q9UKJ5 165 aa24.5■■□□□ 1.51
SMG9-208ENST00000598886 NOS1P29475 1434 aa24.5■■□□□ 1.51
SMG9-208ENST00000598886 UNC13BO14795 1591 aa24.5■■□□□ 1.51
SMG9-208ENST00000598886 TET3O43151 1660 aa24.48■■□□□ 1.51
SMG9-208ENST00000598886 KANK1Q14678 1352 aa24.47■■□□□ 1.51
SMG9-208ENST00000598886 LTKP29376 864 aa24.47■■□□□ 1.51
SMG9-208ENST00000598886 ILDR2Q71H61 639 aa24.47■■□□□ 1.51
SMG9-208ENST00000598886 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
SMG9-208ENST00000598886 ADGRB3O60242 1522 aa24.46■■□□□ 1.51
SMG9-208ENST00000598886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
SMG9-208ENST00000598886 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
SMG9-208ENST00000598886 MYO5BQ9ULV0 1848 aa24.44■■□□□ 1.5
SMG9-208ENST00000598886 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
SMG9-208ENST00000598886 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
SMG9-208ENST00000598886 IDI1Q13907 227 aa24.39■■□□□ 1.49
SMG9-208ENST00000598886 E9PCH4 1651 aa24.39■■□□□ 1.49
SMG9-208ENST00000598886 FAM50AQ14320 339 aaKnown RBP24.38■■□□□ 1.49
SMG9-208ENST00000598886 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
SMG9-208ENST00000598886 TXNDC2Q86VQ3 553 aa24.37■■□□□ 1.49
SMG9-208ENST00000598886 TMEM131LA2VDJ0 1609 aa24.36■■□□□ 1.49
SMG9-208ENST00000598886 TOM1O60784 492 aa24.36■■□□□ 1.49
SMG9-208ENST00000598886 HSPA1LP34931 641 aa24.36■■□□□ 1.49
SMG9-208ENST00000598886 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
SMG9-208ENST00000598886 NWD1Q149M9 1564 aa24.35■■□□□ 1.49
SMG9-208ENST00000598886 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
SMG9-208ENST00000598886 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
SMG9-208ENST00000598886 ZFYVE9O95405 1425 aa24.32■■□□□ 1.48
SMG9-208ENST00000598886 EID1Q9Y6B2 187 aa24.29■■□□□ 1.48
SMG9-208ENST00000598886 SLC52A1Q9NWF4 448 aa24.27■■□□□ 1.48
SMG9-208ENST00000598886 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
SMG9-208ENST00000598886 CHD2O14647 1828 aaKnown RBP24.26■■□□□ 1.47
SMG9-208ENST00000598886 SOCS7O14512 581 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms