RNA–Protein interactions for RNA: ENST00000598411.1

SOD3-203, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-203ENST00000598411 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
SOD3-203ENST00000598411 VWDEQ8N2E2 1590 aa12.38□□□□□ -0.43
SOD3-203ENST00000598411 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
SOD3-203ENST00000598411 CEP152O94986 1710 aa12.35□□□□□ -0.43
SOD3-203ENST00000598411 RTEL1-TNFRSF6BF6WH68 1400 aa12.35□□□□□ -0.43
SOD3-203ENST00000598411 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
SOD3-203ENST00000598411 PZPP20742 1482 aa12.34□□□□□ -0.43
SOD3-203ENST00000598411 RNF17Q9BXT8 1623 aaKnown RBP12.34□□□□□ -0.43
SOD3-203ENST00000598411 SOCS7O14512 581 aa12.34□□□□□ -0.43
SOD3-203ENST00000598411 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
SOD3-203ENST00000598411 CCDC141Q6ZP82 1450 aa12.34□□□□□ -0.43
SOD3-203ENST00000598411 KDM5DQ9BY66 1539 aa12.33□□□□□ -0.44
SOD3-203ENST00000598411 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
SOD3-203ENST00000598411 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
SOD3-203ENST00000598411 ABCC3O15438 1527 aa12.32□□□□□ -0.44
SOD3-203ENST00000598411 TNRQ92752 1358 aa12.31□□□□□ -0.44
SOD3-203ENST00000598411 KIF3BO15066 747 aa12.31□□□□□ -0.44
SOD3-203ENST00000598411 UBAP1LF5GYI3 381 aa12.3□□□□□ -0.44
SOD3-203ENST00000598411 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
SOD3-203ENST00000598411 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
SOD3-203ENST00000598411 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
SOD3-203ENST00000598411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
SOD3-203ENST00000598411 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
SOD3-203ENST00000598411 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
SOD3-203ENST00000598411 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
SOD3-203ENST00000598411 PKD2Q13563 968 aa12.29□□□□□ -0.44
SOD3-203ENST00000598411 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
SOD3-203ENST00000598411 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
SOD3-203ENST00000598411 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
SOD3-203ENST00000598411 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
SOD3-203ENST00000598411 MED14O60244 1454 aa12.27□□□□□ -0.44
SOD3-203ENST00000598411 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
SOD3-203ENST00000598411 HSPA1LP34931 641 aa12.27□□□□□ -0.45
SOD3-203ENST00000598411 ERVK-7P63135 1459 aa12.26□□□□□ -0.45
SOD3-203ENST00000598411 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
SOD3-203ENST00000598411 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
SOD3-203ENST00000598411 CROCC2H7BZ55 1655 aa12.26□□□□□ -0.45
SOD3-203ENST00000598411 CPS1P31327 1500 aa12.24□□□□□ -0.45
SOD3-203ENST00000598411 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
SOD3-203ENST00000598411 EIF2AK4Q9P2K8 1649 aaKnown RBP12.24□□□□□ -0.45
SOD3-203ENST00000598411 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
SOD3-203ENST00000598411 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
SOD3-203ENST00000598411 VPS8Q8N3P4 1428 aa12.23□□□□□ -0.45
SOD3-203ENST00000598411 WASHC2CQ9Y4E1 1318 aa12.21□□□□□ -0.45
SOD3-203ENST00000598411 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
SOD3-203ENST00000598411 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.46
SOD3-203ENST00000598411 LTKP29376 864 aa12.2□□□□□ -0.46
SOD3-203ENST00000598411 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
SOD3-203ENST00000598411 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
SOD3-203ENST00000598411 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
SOD3-203ENST00000598411 ABCC5O15440 1437 aa12.19□□□□□ -0.46
SOD3-203ENST00000598411 MYOM3Q5VTT5 1437 aa12.19□□□□□ -0.46
SOD3-203ENST00000598411 SYNMO15061 1565 aa12.18□□□□□ -0.46
SOD3-203ENST00000598411 SLIT1O75093 1534 aa12.17□□□□□ -0.46
SOD3-203ENST00000598411 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
SOD3-203ENST00000598411 PTPN23Q9H3S7 1636 aa12.17□□□□□ -0.46
SOD3-203ENST00000598411 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
SOD3-203ENST00000598411 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
SOD3-203ENST00000598411 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
SOD3-203ENST00000598411 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
SOD3-203ENST00000598411 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
SOD3-203ENST00000598411 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
SOD3-203ENST00000598411 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
SOD3-203ENST00000598411 TET3O43151 1660 aa12.13□□□□□ -0.47
SOD3-203ENST00000598411 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
SOD3-203ENST00000598411 ARHGAP31Q2M1Z3 1444 aa12.12□□□□□ -0.47
SOD3-203ENST00000598411 KIF15Q9NS87 1388 aa12.12□□□□□ -0.47
SOD3-203ENST00000598411 DAPK1P53355 1430 aa12.11□□□□□ -0.47
SOD3-203ENST00000598411 TSPY4P0CV99 314 aa12.1□□□□□ -0.47
SOD3-203ENST00000598411 TSPY10P0CW01 314 aa12.1□□□□□ -0.47
SOD3-203ENST00000598411 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
SOD3-203ENST00000598411 TOM1O60784 492 aa12.09□□□□□ -0.47
SOD3-203ENST00000598411 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
SOD3-203ENST00000598411 RRP7BPQ9NSQ0 103 aa12.09□□□□□ -0.47
SOD3-203ENST00000598411 LMTK2Q8IWU2 1503 aa12.09□□□□□ -0.47
SOD3-203ENST00000598411 NOS1P29475 1434 aa12.08□□□□□ -0.48
SOD3-203ENST00000598411 FGD6Q6ZV73 1430 aa12.08□□□□□ -0.48
SOD3-203ENST00000598411 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
SOD3-203ENST00000598411 TMEM2Q9UHN6 1383 aa12.07□□□□□ -0.48
SOD3-203ENST00000598411 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
SOD3-203ENST00000598411 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
SOD3-203ENST00000598411 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
SOD3-203ENST00000598411 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
SOD3-203ENST00000598411 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SOD3-203ENST00000598411 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
SOD3-203ENST00000598411 IDI1Q13907 227 aa12.06□□□□□ -0.48
SOD3-203ENST00000598411 TXNDC2Q86VQ3 553 aa12.05□□□□□ -0.48
SOD3-203ENST00000598411 ADGRB3O60242 1522 aa12.05□□□□□ -0.48
SOD3-203ENST00000598411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.48
SOD3-203ENST00000598411 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
SOD3-203ENST00000598411 TMEM131LA2VDJ0 1609 aa12.04□□□□□ -0.48
SOD3-203ENST00000598411 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
SOD3-203ENST00000598411 ADGRL2O95490 1459 aa12.03□□□□□ -0.48
SOD3-203ENST00000598411 E9PCH4 1651 aa12.03□□□□□ -0.48
SOD3-203ENST00000598411 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
SOD3-203ENST00000598411 POTEAQ6S8J7 498 aa12.02□□□□□ -0.49
SOD3-203ENST00000598411 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
SOD3-203ENST00000598411 FAM135BQ49AJ0 1406 aa12□□□□□ -0.49
SOD3-203ENST00000598411 UNC13BO14795 1591 aa11.99□□□□□ -0.49
SOD3-203ENST00000598411 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms