RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 HSPA1LP34931 641 aa19.81■□□□□ 0.76
LTBP4-221ENST00000598178 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
LTBP4-221ENST00000598178 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
LTBP4-221ENST00000598178 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
LTBP4-221ENST00000598178 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
LTBP4-221ENST00000598178 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
LTBP4-221ENST00000598178 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
LTBP4-221ENST00000598178 MBD5Q9P267 1494 aa19.75■□□□□ 0.75
LTBP4-221ENST00000598178 DHX29Q7Z478 1369 aaKnown RBP19.74■□□□□ 0.75
LTBP4-221ENST00000598178 PIP4K2BP78356 416 aa19.74■□□□□ 0.75
LTBP4-221ENST00000598178 MAP3K1Q13233 1512 aa19.74■□□□□ 0.75
LTBP4-221ENST00000598178 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
LTBP4-221ENST00000598178 MED14O60244 1454 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 PZPP20742 1482 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 TNRQ92752 1358 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 CAMSAP2Q08AD1 1489 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
LTBP4-221ENST00000598178 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
LTBP4-221ENST00000598178 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
LTBP4-221ENST00000598178 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
LTBP4-221ENST00000598178 ANKLE2Q86XL3 938 aa19.71■□□□□ 0.75
LTBP4-221ENST00000598178 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
LTBP4-221ENST00000598178 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
LTBP4-221ENST00000598178 NLRP1Q9C000 1473 aa19.7■□□□□ 0.74
LTBP4-221ENST00000598178 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
LTBP4-221ENST00000598178 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
LTBP4-221ENST00000598178 FBXO31Q5XUX0 539 aaPredicted RBP19.68■□□□□ 0.74
LTBP4-221ENST00000598178 MIA2Q96PC5 1412 aa19.67■□□□□ 0.74
LTBP4-221ENST00000598178 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
LTBP4-221ENST00000598178 APLP2Q06481 763 aa19.66■□□□□ 0.74
LTBP4-221ENST00000598178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.66■□□□□ 0.74
LTBP4-221ENST00000598178 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
LTBP4-221ENST00000598178 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
LTBP4-221ENST00000598178 KIF3BO15066 747 aa19.64■□□□□ 0.73
LTBP4-221ENST00000598178 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
LTBP4-221ENST00000598178 IQGAP1P46940 1657 aa19.64■□□□□ 0.73
LTBP4-221ENST00000598178 WASHC2CQ9Y4E1 1318 aa19.63■□□□□ 0.73
LTBP4-221ENST00000598178 SYNMO15061 1565 aa19.61■□□□□ 0.73
LTBP4-221ENST00000598178 STRCP1A6NGW2 1772 aa19.61■□□□□ 0.73
LTBP4-221ENST00000598178 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
LTBP4-221ENST00000598178 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
LTBP4-221ENST00000598178 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
LTBP4-221ENST00000598178 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
LTBP4-221ENST00000598178 LRRC7Q96NW7 1537 aa19.6■□□□□ 0.73
LTBP4-221ENST00000598178 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
LTBP4-221ENST00000598178 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
LTBP4-221ENST00000598178 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
LTBP4-221ENST00000598178 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
LTBP4-221ENST00000598178 ABCC3O15438 1527 aa19.51■□□□□ 0.71
LTBP4-221ENST00000598178 UBR1Q8IWV7 1749 aa19.5■□□□□ 0.71
LTBP4-221ENST00000598178 PTPN23Q9H3S7 1636 aa19.5■□□□□ 0.71
LTBP4-221ENST00000598178 RGS17Q9UGC6 210 aaPredicted RBP19.49■□□□□ 0.71
LTBP4-221ENST00000598178 CROCC2H7BZ55 1655 aa19.49■□□□□ 0.71
LTBP4-221ENST00000598178 ERVK-7P63135 1459 aa19.48■□□□□ 0.71
LTBP4-221ENST00000598178 XIRP1Q702N8 1843 aaKnown RBP19.47■□□□□ 0.71
LTBP4-221ENST00000598178 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
LTBP4-221ENST00000598178 ARHGAP23Q9P227 1491 aa19.46■□□□□ 0.71
LTBP4-221ENST00000598178 SLIT1O75093 1534 aa19.46■□□□□ 0.71
LTBP4-221ENST00000598178 DUOX2Q9NRD8 1548 aa19.45■□□□□ 0.7
LTBP4-221ENST00000598178 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
LTBP4-221ENST00000598178 FAM135BQ49AJ0 1406 aa19.43■□□□□ 0.7
LTBP4-221ENST00000598178 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
LTBP4-221ENST00000598178 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
LTBP4-221ENST00000598178 LTKP29376 864 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 KIF15Q9NS87 1388 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 DAPK1P53355 1430 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 ARHGAP31Q2M1Z3 1444 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 CEP152O94986 1710 aa19.39■□□□□ 0.69
LTBP4-221ENST00000598178 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
LTBP4-221ENST00000598178 ABCC5O15440 1437 aa19.37■□□□□ 0.69
LTBP4-221ENST00000598178 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
LTBP4-221ENST00000598178 KDM5AP29375 1690 aaKnown RBP19.36■□□□□ 0.69
LTBP4-221ENST00000598178 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
LTBP4-221ENST00000598178 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
LTBP4-221ENST00000598178 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
LTBP4-221ENST00000598178 POTEAQ6S8J7 498 aa19.33■□□□□ 0.68
LTBP4-221ENST00000598178 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
LTBP4-221ENST00000598178 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
LTBP4-221ENST00000598178 RRP7BPQ9NSQ0 103 aa19.31■□□□□ 0.68
LTBP4-221ENST00000598178 KANK1Q14678 1352 aa19.31■□□□□ 0.68
LTBP4-221ENST00000598178 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
LTBP4-221ENST00000598178 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
LTBP4-221ENST00000598178 TET3O43151 1660 aa19.28■□□□□ 0.68
LTBP4-221ENST00000598178 KCNA6P17658 529 aa19.28■□□□□ 0.68
LTBP4-221ENST00000598178 FAM50AQ14320 339 aaKnown RBP19.27■□□□□ 0.68
LTBP4-221ENST00000598178 ADGRL2O95490 1459 aa19.26■□□□□ 0.67
LTBP4-221ENST00000598178 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
LTBP4-221ENST00000598178 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
LTBP4-221ENST00000598178 CHIC2Q9UKJ5 165 aa19.25■□□□□ 0.67
LTBP4-221ENST00000598178 NWD1Q149M9 1564 aa19.24■□□□□ 0.67
LTBP4-221ENST00000598178 LMTK2Q8IWU2 1503 aa19.22■□□□□ 0.67
LTBP4-221ENST00000598178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
LTBP4-221ENST00000598178 PROSER2Q86WR7 435 aaPredicted RBP19.2■□□□□ 0.66
LTBP4-221ENST00000598178 SETD1AO15047 1707 aaKnown RBP19.2■□□□□ 0.66
LTBP4-221ENST00000598178 PHLPP1O60346 1717 aa19.2■□□□□ 0.66
LTBP4-221ENST00000598178 JCADQ9P266 1359 aa19.19■□□□□ 0.66
LTBP4-221ENST00000598178 IDI1Q13907 227 aa19.19■□□□□ 0.66
LTBP4-221ENST00000598178 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms