RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.92	□□□□□ -0.18
FARP1-222	ENST00000597777	SPAG9	O60271	1321 aa	Known RBP	13.92	□□□□□ -0.18
FARP1-222	ENST00000597777	DENND4B	O75064	1496 aa	Predicted RBP	13.92	□□□□□ -0.18
FARP1-222	ENST00000597777	KIDINS220	Q9ULH0	1771 aa		13.92	□□□□□ -0.18
FARP1-222	ENST00000597777	ZMYM4	Q5VZL5	1548 aa		13.9	□□□□□ -0.18
FARP1-222	ENST00000597777	MAGI2	Q86UL8	1455 aa		13.9	□□□□□ -0.18
FARP1-222	ENST00000597777	FRMPD1	Q5SYB0	1578 aa		13.88	□□□□□ -0.19
FARP1-222	ENST00000597777	TSPOAP1	O95153	1857 aa		13.88	□□□□□ -0.19
FARP1-222	ENST00000597777	BCORL1	Q5H9F3	1711 aa		13.88	□□□□□ -0.19
FARP1-222	ENST00000597777	DEPDC5	O75140	1603 aa		13.88	□□□□□ -0.19
FARP1-222	ENST00000597777	AFAP1	Q8N556	730 aa		13.88	□□□□□ -0.19
FARP1-222	ENST00000597777	PZP	P20742	1482 aa		13.87	□□□□□ -0.19
FARP1-222	ENST00000597777	SIN3A	Q96ST3	1273 aa		13.87	□□□□□ -0.19
FARP1-222	ENST00000597777	IQGAP3	Q86VI3	1631 aa		13.86	□□□□□ -0.19
FARP1-222	ENST00000597777	IRX6	P78412	446 aa	Predicted RBP	13.86	□□□□□ -0.19
FARP1-222	ENST00000597777	SENP3	Q9H4L4	574 aa	Predicted RBP	13.85	□□□□□ -0.19
FARP1-222	ENST00000597777	ABCA6	Q8N139	1617 aa		13.84	□□□□□ -0.19
FARP1-222	ENST00000597777	DHX29	Q7Z478	1369 aa	Known RBP	13.83	□□□□□ -0.19
FARP1-222	ENST00000597777	RNF17	Q9BXT8	1623 aa	Known RBP	13.83	□□□□□ -0.2
FARP1-222	ENST00000597777	MPHOSPH9	Q99550	1183 aa		13.83	□□□□□ -0.2
FARP1-222	ENST00000597777	DIP2C	Q9Y2E4	1556 aa		13.83	□□□□□ -0.2
FARP1-222	ENST00000597777	FAM135A	Q9P2D6	1515 aa		13.82	□□□□□ -0.2
FARP1-222	ENST00000597777	A2M	P01023	1474 aa		13.82	□□□□□ -0.2
FARP1-222	ENST00000597777	RERE	Q9P2R6	1566 aa		13.82	□□□□□ -0.2
FARP1-222	ENST00000597777	PRDM15	P57071	1507 aa	Predicted RBP	13.81	□□□□□ -0.2
FARP1-222	ENST00000597777	ERICH6	Q7L0X2	663 aa		13.81	□□□□□ -0.2
FARP1-222	ENST00000597777	TIMELESS	Q9UNS1	1208 aa		13.81	□□□□□ -0.2
FARP1-222	ENST00000597777	VWDE	Q8N2E2	1590 aa		13.81	□□□□□ -0.2
FARP1-222	ENST00000597777	SALL2	Q9Y467	1007 aa	Predicted RBP	13.8	□□□□□ -0.2
FARP1-222	ENST00000597777	NUP155	O75694	1391 aa		13.8	□□□□□ -0.2
FARP1-222	ENST00000597777	MROH1	Q8NDA8	1641 aa		13.79	□□□□□ -0.2
FARP1-222	ENST00000597777	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.78	□□□□□ -0.2
FARP1-222	ENST00000597777	ANKRD30B	Q9BXX2	1392 aa		13.77	□□□□□ -0.21
FARP1-222	ENST00000597777	TET3	O43151	1660 aa		13.76	□□□□□ -0.21
FARP1-222	ENST00000597777	RAPGEF3	O95398	923 aa		13.76	□□□□□ -0.21
FARP1-222	ENST00000597777	FKBP8	Q14318	412 aa		13.76	□□□□□ -0.21
FARP1-222	ENST00000597777	LMTK2	Q8IWU2	1503 aa		13.76	□□□□□ -0.21
FARP1-222	ENST00000597777	ARHGEF40	Q8TER5	1519 aa		13.76	□□□□□ -0.21
FARP1-222	ENST00000597777	ZC3H13	Q5T200	1668 aa	Known RBP	13.74	□□□□□ -0.21
FARP1-222	ENST00000597777	KANK1	Q14678	1352 aa		13.74	□□□□□ -0.21
FARP1-222	ENST00000597777	ATP10A	O60312	1499 aa		13.74	□□□□□ -0.21
FARP1-222	ENST00000597777	AGL	P35573	1532 aa		13.73	□□□□□ -0.21
FARP1-222	ENST00000597777	RPRD2	Q5VT52	1461 aa	Known RBP	13.73	□□□□□ -0.21
FARP1-222	ENST00000597777	YEATS2	Q9ULM3	1422 aa		13.72	□□□□□ -0.21
FARP1-222	ENST00000597777	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.72	□□□□□ -0.21
FARP1-222	ENST00000597777	PKD2	Q13563	968 aa		13.71	□□□□□ -0.21
FARP1-222	ENST00000597777		E9PCH4	1651 aa		13.71	□□□□□ -0.21
FARP1-222	ENST00000597777	ANP32C	O43423	234 aa		13.71	□□□□□ -0.22
FARP1-222	ENST00000597777	FAM9B	Q8IZU0	186 aa		13.7	□□□□□ -0.22
FARP1-222	ENST00000597777	EFCAB6	Q5THR3	1501 aa		13.7	□□□□□ -0.22
FARP1-222	ENST00000597777	KIF3B	O15066	747 aa		13.69	□□□□□ -0.22
FARP1-222	ENST00000597777	CEP152	O94986	1710 aa		13.68	□□□□□ -0.22
FARP1-222	ENST00000597777	SPHKAP	Q2M3C7	1700 aa		13.68	□□□□□ -0.22
FARP1-222	ENST00000597777	TONSL	Q96HA7	1378 aa		13.68	□□□□□ -0.22
FARP1-222	ENST00000597777	TRPM2	O94759	1503 aa		13.67	□□□□□ -0.22
FARP1-222	ENST00000597777	ABCC3	O15438	1527 aa		13.67	□□□□□ -0.22
FARP1-222	ENST00000597777	FOXD1	Q16676	465 aa		13.67	□□□□□ -0.22
FARP1-222	ENST00000597777	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
FARP1-222	ENST00000597777	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
FARP1-222	ENST00000597777	CAMSAP1	Q5T5Y3	1602 aa		13.66	□□□□□ -0.22
FARP1-222	ENST00000597777	PTPRT	O14522	1441 aa		13.66	□□□□□ -0.22
FARP1-222	ENST00000597777	KDM2A	Q9Y2K7	1162 aa		13.65	□□□□□ -0.22
FARP1-222	ENST00000597777	NEURL4	Q96JN8	1562 aa		13.65	□□□□□ -0.22
FARP1-222	ENST00000597777	BCL11A	Q9H165	835 aa		13.64	□□□□□ -0.23
FARP1-222	ENST00000597777	PLA2R1	Q13018	1463 aa		13.64	□□□□□ -0.23
FARP1-222	ENST00000597777	PPP6R1	Q9UPN7	881 aa		13.64	□□□□□ -0.23
FARP1-222	ENST00000597777	TRH	P20396	242 aa	Predicted RBP	13.64	□□□□□ -0.23
FARP1-222	ENST00000597777	ARHGAP31	Q2M1Z3	1444 aa		13.63	□□□□□ -0.23
FARP1-222	ENST00000597777	SIGLEC1	Q9BZZ2	1709 aa		13.62	□□□□□ -0.23
FARP1-222	ENST00000597777	CCDC144A	A2RUR9	1427 aa		13.62	□□□□□ -0.23
FARP1-222	ENST00000597777	PPP1R15A	O75807	674 aa	Predicted RBP	13.61	□□□□□ -0.23
FARP1-222	ENST00000597777	CLTCL1	P53675	1640 aa		13.58	□□□□□ -0.24
FARP1-222	ENST00000597777	CNTLN	Q9NXG0	1405 aa		13.58	□□□□□ -0.24
FARP1-222	ENST00000597777	NPAT	Q14207	1427 aa		13.57	□□□□□ -0.24
FARP1-222	ENST00000597777	WASHC2C	Q9Y4E1	1318 aa		13.57	□□□□□ -0.24
FARP1-222	ENST00000597777	GGT6	Q6P531	493 aa		13.57	□□□□□ -0.24
FARP1-222	ENST00000597777	PIK3C2B	O00750	1634 aa		13.56	□□□□□ -0.24
FARP1-222	ENST00000597777	NOS1	P29475	1434 aa		13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	UHRF1BP1	Q6BDS2	1440 aa		13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	L3MBTL2	Q969R5	705 aa		13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	MROH2A	A6NES4	1674 aa		13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	CLTC	Q00610	1675 aa	Known RBP	13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	KIF1B	O60333	1816 aa		13.55	□□□□□ -0.24
FARP1-222	ENST00000597777	PREX1	Q8TCU6	1659 aa		13.54	□□□□□ -0.24
FARP1-222	ENST00000597777	SPATA31E1	Q6ZUB1	1445 aa		13.54	□□□□□ -0.24
FARP1-222	ENST00000597777	SYNM	O15061	1565 aa		13.52	□□□□□ -0.25
FARP1-222	ENST00000597777	RGL3	Q3MIN7	710 aa		13.51	□□□□□ -0.25
FARP1-222	ENST00000597777	ADGRB3	O60242	1522 aa		13.51	□□□□□ -0.25
FARP1-222	ENST00000597777	STAC3	Q96MF2	364 aa		13.51	□□□□□ -0.25
FARP1-222	ENST00000597777	SPATA31D1	Q6ZQQ2	1576 aa		13.5	□□□□□ -0.25
FARP1-222	ENST00000597777	IFT172	Q9UG01	1749 aa		13.5	□□□□□ -0.25
FARP1-222	ENST00000597777	ERVK-7	P63135	1459 aa		13.49	□□□□□ -0.25
FARP1-222	ENST00000597777	RALGAPB	Q86X10	1494 aa		13.48	□□□□□ -0.25
FARP1-222	ENST00000597777	UGGT1	Q9NYU2	1555 aa		13.48	□□□□□ -0.25
FARP1-222	ENST00000597777	MYOM2	P54296	1465 aa		13.47	□□□□□ -0.25
FARP1-222	ENST00000597777	NPM2	Q86SE8	214 aa	Known RBP	13.47	□□□□□ -0.25
FARP1-222	ENST00000597777	LAMC1	P11047	1609 aa		13.47	□□□□□ -0.25
FARP1-222	ENST00000597777	TRPM1	Q7Z4N2	1603 aa		13.47	□□□□□ -0.25
FARP1-222	ENST00000597777	PLPPR3	Q6T4P5	718 aa		13.46	□□□□□ -0.25
FARP1-222	ENST00000597777	PRAG1	Q86YV5	1406 aa		13.46	□□□□□ -0.25

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