RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
SH2D3A-207ENST00000597687 KIF3BO15066 747 aa23.26■■□□□ 1.31
SH2D3A-207ENST00000597687 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
SH2D3A-207ENST00000597687 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
SH2D3A-207ENST00000597687 ARHGEF5Q12774 1597 aa23.25■■□□□ 1.31
SH2D3A-207ENST00000597687 TNRQ92752 1358 aa23.25■■□□□ 1.31
SH2D3A-207ENST00000597687 PZPP20742 1482 aa23.24■■□□□ 1.31
SH2D3A-207ENST00000597687 DNMT1P26358 1616 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-207ENST00000597687 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
SH2D3A-207ENST00000597687 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
SH2D3A-207ENST00000597687 UBAP1LF5GYI3 381 aa23.21■■□□□ 1.31
SH2D3A-207ENST00000597687 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
SH2D3A-207ENST00000597687 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
SH2D3A-207ENST00000597687 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
SH2D3A-207ENST00000597687 CPS1P31327 1500 aa23.16■■□□□ 1.3
SH2D3A-207ENST00000597687 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
SH2D3A-207ENST00000597687 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
SH2D3A-207ENST00000597687 RNF17Q9BXT8 1623 aaKnown RBP23.13■■□□□ 1.29
SH2D3A-207ENST00000597687 THEMISQ8N1K5 641 aaPredicted RBP23.13■■□□□ 1.29
SH2D3A-207ENST00000597687 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
SH2D3A-207ENST00000597687 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
SH2D3A-207ENST00000597687 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
SH2D3A-207ENST00000597687 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
SH2D3A-207ENST00000597687 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
SH2D3A-207ENST00000597687 MAP3K1Q13233 1512 aa23.09■■□□□ 1.29
SH2D3A-207ENST00000597687 SOCS7O14512 581 aa23.08■■□□□ 1.29
SH2D3A-207ENST00000597687 APLP2Q06481 763 aa23.08■■□□□ 1.29
SH2D3A-207ENST00000597687 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-207ENST00000597687 NEURL4Q96JN8 1562 aa23.08■■□□□ 1.29
SH2D3A-207ENST00000597687 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
SH2D3A-207ENST00000597687 TOM1O60784 492 aa23.07■■□□□ 1.28
SH2D3A-207ENST00000597687 MYOM3Q5VTT5 1437 aa23.07■■□□□ 1.28
SH2D3A-207ENST00000597687 ABCC3O15438 1527 aa23.06■■□□□ 1.28
SH2D3A-207ENST00000597687 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
SH2D3A-207ENST00000597687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
SH2D3A-207ENST00000597687 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
SH2D3A-207ENST00000597687 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
SH2D3A-207ENST00000597687 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
SH2D3A-207ENST00000597687 ILDR2Q71H61 639 aa23.01■■□□□ 1.27
SH2D3A-207ENST00000597687 CEP152O94986 1710 aa23.01■■□□□ 1.27
SH2D3A-207ENST00000597687 MED14O60244 1454 aa22.99■■□□□ 1.27
SH2D3A-207ENST00000597687 ERVK-7P63135 1459 aa22.99■■□□□ 1.27
SH2D3A-207ENST00000597687 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
SH2D3A-207ENST00000597687 CROCC2H7BZ55 1655 aa22.99■■□□□ 1.27
SH2D3A-207ENST00000597687 SYNMO15061 1565 aa22.98■■□□□ 1.27
SH2D3A-207ENST00000597687 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
SH2D3A-207ENST00000597687 VWDEQ8N2E2 1590 aa22.96■■□□□ 1.27
SH2D3A-207ENST00000597687 KANK1Q14678 1352 aa22.95■■□□□ 1.26
SH2D3A-207ENST00000597687 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
SH2D3A-207ENST00000597687 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
SH2D3A-207ENST00000597687 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
SH2D3A-207ENST00000597687 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
SH2D3A-207ENST00000597687 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
SH2D3A-207ENST00000597687 UBR1Q8IWV7 1749 aa22.92■■□□□ 1.26
SH2D3A-207ENST00000597687 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
SH2D3A-207ENST00000597687 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
SH2D3A-207ENST00000597687 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
SH2D3A-207ENST00000597687 EID1Q9Y6B2 187 aa22.89■■□□□ 1.25
SH2D3A-207ENST00000597687 MED1Q15648 1581 aaPredicted RBP22.89■■□□□ 1.25
SH2D3A-207ENST00000597687 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
SH2D3A-207ENST00000597687 HSPA1LP34931 641 aa22.88■■□□□ 1.25
SH2D3A-207ENST00000597687 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
SH2D3A-207ENST00000597687 ARHGAP31Q2M1Z3 1444 aa22.87■■□□□ 1.25
SH2D3A-207ENST00000597687 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
SH2D3A-207ENST00000597687 DAPK1P53355 1430 aa22.84■■□□□ 1.25
SH2D3A-207ENST00000597687 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
SH2D3A-207ENST00000597687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.25
SH2D3A-207ENST00000597687 ABCC5O15440 1437 aa22.82■■□□□ 1.24
SH2D3A-207ENST00000597687 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
SH2D3A-207ENST00000597687 SLIT1O75093 1534 aa22.82■■□□□ 1.24
SH2D3A-207ENST00000597687 LRRC7Q96NW7 1537 aa22.81■■□□□ 1.24
SH2D3A-207ENST00000597687 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
SH2D3A-207ENST00000597687 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
SH2D3A-207ENST00000597687 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
SH2D3A-207ENST00000597687 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
SH2D3A-207ENST00000597687 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
SH2D3A-207ENST00000597687 EFCAB6Q5THR3 1501 aa22.77■■□□□ 1.24
SH2D3A-207ENST00000597687 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
SH2D3A-207ENST00000597687 TMEM2Q9UHN6 1383 aa22.74■■□□□ 1.23
SH2D3A-207ENST00000597687 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
SH2D3A-207ENST00000597687 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
SH2D3A-207ENST00000597687 ADGRB3O60242 1522 aa22.7■■□□□ 1.22
SH2D3A-207ENST00000597687 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
SH2D3A-207ENST00000597687 LTKP29376 864 aa22.68■■□□□ 1.22
SH2D3A-207ENST00000597687 BCANQ96GW7 911 aa22.68■■□□□ 1.22
SH2D3A-207ENST00000597687 ADGRL2O95490 1459 aa22.67■■□□□ 1.22
SH2D3A-207ENST00000597687 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
SH2D3A-207ENST00000597687 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
SH2D3A-207ENST00000597687 SLC52A1Q9NWF4 448 aa22.65■■□□□ 1.22
SH2D3A-207ENST00000597687 NKTRP30414 1462 aaKnown RBP22.63■■□□□ 1.21
SH2D3A-207ENST00000597687 HDGFP51858 240 aaKnown RBP22.63■■□□□ 1.21
SH2D3A-207ENST00000597687 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
SH2D3A-207ENST00000597687 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
SH2D3A-207ENST00000597687 PPP1R15AO75807 674 aaPredicted RBP22.62■■□□□ 1.21
SH2D3A-207ENST00000597687 TET3O43151 1660 aa22.62■■□□□ 1.21
SH2D3A-207ENST00000597687 NOS1P29475 1434 aa22.61■■□□□ 1.21
SH2D3A-207ENST00000597687 IDI1Q13907 227 aa22.61■■□□□ 1.21
SH2D3A-207ENST00000597687 GCC2Q8IWJ2 1684 aa22.6■■□□□ 1.21
SH2D3A-207ENST00000597687 TMEM94Q12767 1356 aa22.6■■□□□ 1.21
SH2D3A-207ENST00000597687 KCNA6P17658 529 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms