RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 INO80Q9ULG1 1556 aaPredicted RBP21.74■■□□□ 1.07
IRF3-218ENST00000597369 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
IRF3-218ENST00000597369 IQGAP1P46940 1657 aa21.72■■□□□ 1.07
IRF3-218ENST00000597369 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
IRF3-218ENST00000597369 ADGBQ8N7X0 1667 aa21.7■■□□□ 1.06
IRF3-218ENST00000597369 SETD1AO15047 1707 aaKnown RBP21.7■■□□□ 1.06
IRF3-218ENST00000597369 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.06
IRF3-218ENST00000597369 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
IRF3-218ENST00000597369 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.06
IRF3-218ENST00000597369 KIAA1107Q9UPP5 1409 aa21.69■■□□□ 1.06
IRF3-218ENST00000597369 ZNF777Q9ULD5 760 aaPredicted RBP21.68■■□□□ 1.06
IRF3-218ENST00000597369 UGGT1Q9NYU2 1555 aa21.67■■□□□ 1.06
IRF3-218ENST00000597369 PZPP20742 1482 aa21.67■■□□□ 1.06
IRF3-218ENST00000597369 NLRP1Q9C000 1473 aa21.66■■□□□ 1.06
IRF3-218ENST00000597369 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
IRF3-218ENST00000597369 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
IRF3-218ENST00000597369 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.05
IRF3-218ENST00000597369 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
IRF3-218ENST00000597369 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
IRF3-218ENST00000597369 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
IRF3-218ENST00000597369 XIRP1Q702N8 1843 aaKnown RBP21.62■■□□□ 1.05
IRF3-218ENST00000597369 UPF1Q92900 1129 aaKnown RBP eCLIP21.62■■□□□ 1.05
IRF3-218ENST00000597369 ZC3H13Q5T200 1668 aaKnown RBP21.59■■□□□ 1.05
IRF3-218ENST00000597369 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
IRF3-218ENST00000597369 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
IRF3-218ENST00000597369 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
IRF3-218ENST00000597369 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
IRF3-218ENST00000597369 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
IRF3-218ENST00000597369 WASHC2CQ9Y4E1 1318 aa21.53■■□□□ 1.04
IRF3-218ENST00000597369 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
IRF3-218ENST00000597369 KIF3BO15066 747 aa21.5■■□□□ 1.03
IRF3-218ENST00000597369 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
IRF3-218ENST00000597369 MBD5Q9P267 1494 aa21.45■■□□□ 1.03
IRF3-218ENST00000597369 SCAF11Q99590 1463 aaKnown RBP21.44■■□□□ 1.02
IRF3-218ENST00000597369 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
IRF3-218ENST00000597369 JCADQ9P266 1359 aa21.43■■□□□ 1.02
IRF3-218ENST00000597369 UBR1Q8IWV7 1749 aa21.41■■□□□ 1.02
IRF3-218ENST00000597369 ZNF772Q68DY9 489 aaPredicted RBP21.41■■□□□ 1.02
IRF3-218ENST00000597369 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
IRF3-218ENST00000597369 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
IRF3-218ENST00000597369 LTKP29376 864 aa21.39■■□□□ 1.01
IRF3-218ENST00000597369 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.01
IRF3-218ENST00000597369 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
IRF3-218ENST00000597369 SLIT1O75093 1534 aa21.38■■□□□ 1.01
IRF3-218ENST00000597369 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
IRF3-218ENST00000597369 ZNF644Q9H582 1327 aaPredicted RBP21.37■■□□□ 1.01
IRF3-218ENST00000597369 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
IRF3-218ENST00000597369 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
IRF3-218ENST00000597369 NCOA2Q15596 1464 aa21.35■■□□□ 1.01
IRF3-218ENST00000597369 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
IRF3-218ENST00000597369 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
IRF3-218ENST00000597369 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
IRF3-218ENST00000597369 SPATA31A6Q5VVP1 1343 aa21.33■■□□□ 1.01
IRF3-218ENST00000597369 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
IRF3-218ENST00000597369 CFAP65Q6ZU64 1925 aaKnown RBP21.32■■□□□ 1
IRF3-218ENST00000597369 KCNA6P17658 529 aa21.32■■□□□ 1
IRF3-218ENST00000597369 RXRBP28702 533 aa21.32■■□□□ 1
IRF3-218ENST00000597369 LRP6O75581 1613 aa21.31■■□□□ 1
IRF3-218ENST00000597369 ABCC3O15438 1527 aa21.3■■□□□ 1
IRF3-218ENST00000597369 SLAIN2Q9P270 581 aa21.3■■□□□ 1
IRF3-218ENST00000597369 EID1Q9Y6B2 187 aa21.3■■□□□ 1
IRF3-218ENST00000597369 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
IRF3-218ENST00000597369 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
IRF3-218ENST00000597369 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
IRF3-218ENST00000597369 PROSER2Q86WR7 435 aaPredicted RBP21.28■■□□□ 1
IRF3-218ENST00000597369 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
IRF3-218ENST00000597369 PRDM15P57071 1507 aaPredicted RBP21.27■■□□□ 1
IRF3-218ENST00000597369 TIAM1Q13009 1591 aa21.27■□□□□ 0.99
IRF3-218ENST00000597369 MEX3CQ5U5Q3 659 aaKnown RBP21.26■□□□□ 0.99
IRF3-218ENST00000597369 MSH6P52701 1360 aa21.23■□□□□ 0.99
IRF3-218ENST00000597369 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
IRF3-218ENST00000597369 NKTRP30414 1462 aaKnown RBP21.22■□□□□ 0.99
IRF3-218ENST00000597369 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
IRF3-218ENST00000597369 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
IRF3-218ENST00000597369 RBM33Q96EV2 1170 aaKnown RBP21.21■□□□□ 0.99
IRF3-218ENST00000597369 TET3O43151 1660 aa21.21■□□□□ 0.99
IRF3-218ENST00000597369 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
IRF3-218ENST00000597369 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
IRF3-218ENST00000597369 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
IRF3-218ENST00000597369 CEP152O94986 1710 aa21.16■□□□□ 0.98
IRF3-218ENST00000597369 KDM5AP29375 1690 aaKnown RBP21.16■□□□□ 0.98
IRF3-218ENST00000597369 EIF2AK4Q9P2K8 1649 aaKnown RBP21.16■□□□□ 0.98
IRF3-218ENST00000597369 FOXD1Q16676 465 aa21.16■□□□□ 0.98
IRF3-218ENST00000597369 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
IRF3-218ENST00000597369 ARHGAP31Q2M1Z3 1444 aa21.15■□□□□ 0.98
IRF3-218ENST00000597369 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
IRF3-218ENST00000597369 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
IRF3-218ENST00000597369 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
IRF3-218ENST00000597369 PIK3C2BO00750 1634 aa21.14■□□□□ 0.97
IRF3-218ENST00000597369 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
IRF3-218ENST00000597369 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
IRF3-218ENST00000597369 ZRANB1Q9UGI0 708 aa21.13■□□□□ 0.97
IRF3-218ENST00000597369 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
IRF3-218ENST00000597369 RGS12O14924 1447 aa21.11■□□□□ 0.97
IRF3-218ENST00000597369 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
IRF3-218ENST00000597369 AFF2P51816 1311 aa21.09■□□□□ 0.97
IRF3-218ENST00000597369 RBM6P78332 1123 aaKnown RBP21.09■□□□□ 0.97
IRF3-218ENST00000597369 NCOA3Q9Y6Q9 1424 aa21.09■□□□□ 0.97
IRF3-218ENST00000597369 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
IRF3-218ENST00000597369 CHD2O14647 1828 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms