RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 LRRC9Q6ZRR7 1453 aa25.28■■□□□ 1.64
LINC02560-201ENST00000596379 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
LINC02560-201ENST00000596379 IQSEC2Q5JU85 1478 aa25.28■■□□□ 1.64
LINC02560-201ENST00000596379 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
LINC02560-201ENST00000596379 WASHC2CQ9Y4E1 1318 aa25.27■■□□□ 1.64
LINC02560-201ENST00000596379 A2ML1A8K2U0 1454 aa25.27■■□□□ 1.64
LINC02560-201ENST00000596379 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
LINC02560-201ENST00000596379 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
LINC02560-201ENST00000596379 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
LINC02560-201ENST00000596379 TNRQ92752 1358 aa25.23■■□□□ 1.63
LINC02560-201ENST00000596379 PZPP20742 1482 aa25.21■■□□□ 1.63
LINC02560-201ENST00000596379 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
LINC02560-201ENST00000596379 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
LINC02560-201ENST00000596379 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
LINC02560-201ENST00000596379 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
LINC02560-201ENST00000596379 UBAP1LF5GYI3 381 aa25.15■■□□□ 1.62
LINC02560-201ENST00000596379 MAST1Q9Y2H9 1570 aa25.14■■□□□ 1.62
LINC02560-201ENST00000596379 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
LINC02560-201ENST00000596379 POLR1AO95602 1720 aaPredicted RBP25.12■■□□□ 1.61
LINC02560-201ENST00000596379 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
LINC02560-201ENST00000596379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.12■■□□□ 1.61
LINC02560-201ENST00000596379 ANKLE2Q86XL3 938 aa25.11■■□□□ 1.61
LINC02560-201ENST00000596379 RNF17Q9BXT8 1623 aaKnown RBP25.11■■□□□ 1.61
LINC02560-201ENST00000596379 ILDR2Q71H61 639 aa25.1■■□□□ 1.61
LINC02560-201ENST00000596379 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
LINC02560-201ENST00000596379 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
LINC02560-201ENST00000596379 ABCC3O15438 1527 aa25.07■■□□□ 1.6
LINC02560-201ENST00000596379 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
LINC02560-201ENST00000596379 EIF2AK4Q9P2K8 1649 aaKnown RBP25.06■■□□□ 1.6
LINC02560-201ENST00000596379 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
LINC02560-201ENST00000596379 APLP2Q06481 763 aa25.04■■□□□ 1.6
LINC02560-201ENST00000596379 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
LINC02560-201ENST00000596379 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
LINC02560-201ENST00000596379 SPATA31D1Q6ZQQ2 1576 aa25.03■■□□□ 1.6
LINC02560-201ENST00000596379 MROH1Q8NDA8 1641 aa25.02■■□□□ 1.6
LINC02560-201ENST00000596379 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
LINC02560-201ENST00000596379 NPHP4O75161 1426 aaPredicted RBP25■■□□□ 1.59
LINC02560-201ENST00000596379 CPS1P31327 1500 aa25■■□□□ 1.59
LINC02560-201ENST00000596379 CEP152O94986 1710 aa25■■□□□ 1.59
LINC02560-201ENST00000596379 ABCC5O15440 1437 aa24.99■■□□□ 1.59
LINC02560-201ENST00000596379 MED14O60244 1454 aa24.99■■□□□ 1.59
LINC02560-201ENST00000596379 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
LINC02560-201ENST00000596379 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
LINC02560-201ENST00000596379 DEPDC5O75140 1603 aa24.98■■□□□ 1.59
LINC02560-201ENST00000596379 KIF15Q9NS87 1388 aa24.97■■□□□ 1.59
LINC02560-201ENST00000596379 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
LINC02560-201ENST00000596379 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
LINC02560-201ENST00000596379 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
LINC02560-201ENST00000596379 TOM1O60784 492 aa24.95■■□□□ 1.58
LINC02560-201ENST00000596379 PIP4K2BP78356 416 aa24.95■■□□□ 1.58
LINC02560-201ENST00000596379 CROCC2H7BZ55 1655 aa24.94■■□□□ 1.58
LINC02560-201ENST00000596379 IQGAP1P46940 1657 aa24.94■■□□□ 1.58
LINC02560-201ENST00000596379 SOCS7O14512 581 aa24.93■■□□□ 1.58
LINC02560-201ENST00000596379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.93■■□□□ 1.58
LINC02560-201ENST00000596379 DAPK1P53355 1430 aa24.92■■□□□ 1.58
LINC02560-201ENST00000596379 ERBINQ96RT1 1412 aa24.92■■□□□ 1.58
LINC02560-201ENST00000596379 HSPA1LP34931 641 aa24.9■■□□□ 1.58
LINC02560-201ENST00000596379 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
LINC02560-201ENST00000596379 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
LINC02560-201ENST00000596379 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
LINC02560-201ENST00000596379 PRDM15P57071 1507 aaPredicted RBP24.89■■□□□ 1.57
LINC02560-201ENST00000596379 ARHGAP31Q2M1Z3 1444 aa24.88■■□□□ 1.57
LINC02560-201ENST00000596379 STRCP1A6NGW2 1772 aa24.86■■□□□ 1.57
LINC02560-201ENST00000596379 LTKP29376 864 aa24.85■■□□□ 1.57
LINC02560-201ENST00000596379 TXNDC2Q86VQ3 553 aa24.85■■□□□ 1.57
LINC02560-201ENST00000596379 KANK1Q14678 1352 aa24.84■■□□□ 1.57
LINC02560-201ENST00000596379 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
LINC02560-201ENST00000596379 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.56
LINC02560-201ENST00000596379 ARHGAP23Q9P227 1491 aa24.81■■□□□ 1.56
LINC02560-201ENST00000596379 LRRC7Q96NW7 1537 aa24.81■■□□□ 1.56
LINC02560-201ENST00000596379 SLIT1O75093 1534 aa24.8■■□□□ 1.56
LINC02560-201ENST00000596379 ALKQ9UM73 1620 aa24.79■■□□□ 1.56
LINC02560-201ENST00000596379 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
LINC02560-201ENST00000596379 EID1Q9Y6B2 187 aa24.78■■□□□ 1.56
LINC02560-201ENST00000596379 PIK3C2BO00750 1634 aa24.78■■□□□ 1.56
LINC02560-201ENST00000596379 IDI1Q13907 227 aa24.75■■□□□ 1.55
LINC02560-201ENST00000596379 LMTK2Q8IWU2 1503 aa24.75■■□□□ 1.55
LINC02560-201ENST00000596379 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
LINC02560-201ENST00000596379 TMEM2Q9UHN6 1383 aa24.74■■□□□ 1.55
LINC02560-201ENST00000596379 SYNMO15061 1565 aa24.74■■□□□ 1.55
LINC02560-201ENST00000596379 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
LINC02560-201ENST00000596379 MED1Q15648 1581 aaPredicted RBP24.7■■□□□ 1.54
LINC02560-201ENST00000596379 ADGRL2O95490 1459 aa24.7■■□□□ 1.54
LINC02560-201ENST00000596379 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
LINC02560-201ENST00000596379 KDM5AP29375 1690 aaKnown RBP24.68■■□□□ 1.54
LINC02560-201ENST00000596379 NOS1P29475 1434 aa24.68■■□□□ 1.54
LINC02560-201ENST00000596379 XIRP1Q702N8 1843 aaKnown RBP24.65■■□□□ 1.54
LINC02560-201ENST00000596379 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
LINC02560-201ENST00000596379 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
LINC02560-201ENST00000596379 SLC26A8Q96RN1 970 aa24.63■■□□□ 1.53
LINC02560-201ENST00000596379 KCNA6P17658 529 aa24.61■■□□□ 1.53
LINC02560-201ENST00000596379 TET3O43151 1660 aa24.6■■□□□ 1.53
LINC02560-201ENST00000596379 ADGRB3O60242 1522 aa24.6■■□□□ 1.53
LINC02560-201ENST00000596379 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
LINC02560-201ENST00000596379 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.52
LINC02560-201ENST00000596379 TMEM94Q12767 1356 aa24.57■■□□□ 1.52
LINC02560-201ENST00000596379 BCANQ96GW7 911 aa24.57■■□□□ 1.52
LINC02560-201ENST00000596379 PROSER2Q86WR7 435 aaPredicted RBP24.56■■□□□ 1.52
LINC02560-201ENST00000596379 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
LINC02560-201ENST00000596379 MYO5BQ9ULV0 1848 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms