RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
LINC00347-204ENST00000596240 RGL2O15211 777 aa13.13□□□□□ -0.31
LINC00347-204ENST00000596240 CLIP1P30622 1438 aa13.13□□□□□ -0.31
LINC00347-204ENST00000596240 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
LINC00347-204ENST00000596240 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
LINC00347-204ENST00000596240 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
LINC00347-204ENST00000596240 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
LINC00347-204ENST00000596240 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
LINC00347-204ENST00000596240 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
LINC00347-204ENST00000596240 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
LINC00347-204ENST00000596240 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
LINC00347-204ENST00000596240 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
LINC00347-204ENST00000596240 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
LINC00347-204ENST00000596240 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
LINC00347-204ENST00000596240 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
LINC00347-204ENST00000596240 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
LINC00347-204ENST00000596240 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
LINC00347-204ENST00000596240 TIE1P35590 1138 aa13.08□□□□□ -0.32
LINC00347-204ENST00000596240 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
LINC00347-204ENST00000596240 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
LINC00347-204ENST00000596240 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 ZFYVE16Q7Z3T8 1539 aa13.07□□□□□ -0.32
LINC00347-204ENST00000596240 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
LINC00347-204ENST00000596240 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
LINC00347-204ENST00000596240 KDM5CP41229 1560 aa13.06□□□□□ -0.32
LINC00347-204ENST00000596240 PLCH2O75038 1416 aa13.05□□□□□ -0.32
LINC00347-204ENST00000596240 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
LINC00347-204ENST00000596240 PSEN1P49768 467 aa13.05□□□□□ -0.32
LINC00347-204ENST00000596240 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
LINC00347-204ENST00000596240 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
LINC00347-204ENST00000596240 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
LINC00347-204ENST00000596240 ABCC1P33527 1531 aa13.03□□□□□ -0.32
LINC00347-204ENST00000596240 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.32
LINC00347-204ENST00000596240 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
LINC00347-204ENST00000596240 PTPRMP28827 1452 aa13.02□□□□□ -0.33
LINC00347-204ENST00000596240 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
LINC00347-204ENST00000596240 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
LINC00347-204ENST00000596240 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
LINC00347-204ENST00000596240 DIP2CQ9Y2E4 1556 aa13□□□□□ -0.33
LINC00347-204ENST00000596240 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
LINC00347-204ENST00000596240 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
LINC00347-204ENST00000596240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
LINC00347-204ENST00000596240 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
LINC00347-204ENST00000596240 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
LINC00347-204ENST00000596240 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
LINC00347-204ENST00000596240 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
LINC00347-204ENST00000596240 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
LINC00347-204ENST00000596240 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
LINC00347-204ENST00000596240 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
LINC00347-204ENST00000596240 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
LINC00347-204ENST00000596240 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
LINC00347-204ENST00000596240 KIDINS220Q9ULH0 1771 aa12.96□□□□□ -0.34
LINC00347-204ENST00000596240 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
LINC00347-204ENST00000596240 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
LINC00347-204ENST00000596240 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
LINC00347-204ENST00000596240 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
LINC00347-204ENST00000596240 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
LINC00347-204ENST00000596240 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
LINC00347-204ENST00000596240 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
LINC00347-204ENST00000596240 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
LINC00347-204ENST00000596240 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
LINC00347-204ENST00000596240 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
LINC00347-204ENST00000596240 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
LINC00347-204ENST00000596240 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
LINC00347-204ENST00000596240 ATP10AO60312 1499 aa12.91□□□□□ -0.34
LINC00347-204ENST00000596240 GPATCH8Q9UKJ3 1502 aaKnown RBP12.9□□□□□ -0.34
LINC00347-204ENST00000596240 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
LINC00347-204ENST00000596240 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
LINC00347-204ENST00000596240 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
LINC00347-204ENST00000596240 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
LINC00347-204ENST00000596240 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
LINC00347-204ENST00000596240 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
LINC00347-204ENST00000596240 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
LINC00347-204ENST00000596240 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
LINC00347-204ENST00000596240 AGLP35573 1532 aa12.87□□□□□ -0.35
LINC00347-204ENST00000596240 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
LINC00347-204ENST00000596240 C3P01024 1663 aa12.86□□□□□ -0.35
LINC00347-204ENST00000596240 STK25O00506 426 aa12.86□□□□□ -0.35
LINC00347-204ENST00000596240 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
LINC00347-204ENST00000596240 C7P10643 843 aa12.85□□□□□ -0.35
LINC00347-204ENST00000596240 PPARGC1BQ86YN6 1023 aaKnown RBP12.85□□□□□ -0.35
LINC00347-204ENST00000596240 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
LINC00347-204ENST00000596240 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
LINC00347-204ENST00000596240 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
LINC00347-204ENST00000596240 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
LINC00347-204ENST00000596240 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
LINC00347-204ENST00000596240 EFCAB3Q8N7B9 438 aa12.84□□□□□ -0.35
LINC00347-204ENST00000596240 IER5LQ5T953 404 aa12.82□□□□□ -0.36
LINC00347-204ENST00000596240 MROH2AA6NES4 1674 aa12.82□□□□□ -0.36
LINC00347-204ENST00000596240 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
LINC00347-204ENST00000596240 GOLGA2Q08379 1002 aa12.81□□□□□ -0.36
LINC00347-204ENST00000596240 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
LINC00347-204ENST00000596240 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
LINC00347-204ENST00000596240 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
LINC00347-204ENST00000596240 CHGAP10645 457 aaKnown RBP12.8□□□□□ -0.36
LINC00347-204ENST00000596240 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms