RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 TSPY10P0CW01 314 aa28.08■■■□□ 2.09
PNKP-206ENST00000595792 MIA2Q96PC5 1412 aa28.07■■■□□ 2.08
PNKP-206ENST00000595792 NCKAP5LQ9HCH0 1330 aa28.05■■■□□ 2.08
PNKP-206ENST00000595792 FBXO31Q5XUX0 539 aaPredicted RBP28.03■■■□□ 2.08
PNKP-206ENST00000595792 FAM135AQ9P2D6 1515 aa28.02■■■□□ 2.08
PNKP-206ENST00000595792 LTBP4Q8N2S1 1624 aa28.02■■■□□ 2.08
PNKP-206ENST00000595792 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
PNKP-206ENST00000595792 PZPP20742 1482 aa28.02■■■□□ 2.08
PNKP-206ENST00000595792 DNMT1P26358 1616 aaKnown RBP28■■■□□ 2.07
PNKP-206ENST00000595792 WASHC2CQ9Y4E1 1318 aa28■■■□□ 2.07
PNKP-206ENST00000595792 A2ML1A8K2U0 1454 aa28■■■□□ 2.07
PNKP-206ENST00000595792 PLA2R1Q13018 1463 aa28■■■□□ 2.07
PNKP-206ENST00000595792 PTPN23Q9H3S7 1636 aa28■■■□□ 2.07
PNKP-206ENST00000595792 CROCC2H7BZ55 1655 aa27.99■■■□□ 2.07
PNKP-206ENST00000595792 TNRQ92752 1358 aa27.99■■■□□ 2.07
PNKP-206ENST00000595792 TCOF1Q13428 1488 aaKnown RBP27.98■■■□□ 2.07
PNKP-206ENST00000595792 MROH1Q8NDA8 1641 aa27.97■■■□□ 2.07
PNKP-206ENST00000595792 EIF2AK4Q9P2K8 1649 aaKnown RBP27.97■■■□□ 2.07
PNKP-206ENST00000595792 APLP2Q06481 763 aa27.97■■■□□ 2.07
PNKP-206ENST00000595792 ABCC3O15438 1527 aa27.95■■■□□ 2.06
PNKP-206ENST00000595792 ABCC5O15440 1437 aa27.93■■■□□ 2.06
PNKP-206ENST00000595792 CEP152O94986 1710 aa27.92■■■□□ 2.06
PNKP-206ENST00000595792 ZC3H13Q5T200 1668 aaKnown RBP27.92■■■□□ 2.06
PNKP-206ENST00000595792 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
PNKP-206ENST00000595792 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
PNKP-206ENST00000595792 SHANK2Q9UPX8 1470 aa27.9■■■□□ 2.06
PNKP-206ENST00000595792 ZNF335Q9H4Z2 1342 aaPredicted RBP27.9■■■□□ 2.06
PNKP-206ENST00000595792 PKD2Q13563 968 aa27.89■■■□□ 2.06
PNKP-206ENST00000595792 POLR1AO95602 1720 aaPredicted RBP27.89■■■□□ 2.05
PNKP-206ENST00000595792 DAPK1P53355 1430 aa27.88■■■□□ 2.05
PNKP-206ENST00000595792 KIF15Q9NS87 1388 aa27.87■■■□□ 2.05
PNKP-206ENST00000595792 NEURL4Q96JN8 1562 aa27.86■■■□□ 2.05
PNKP-206ENST00000595792 RRP7BPQ9NSQ0 103 aa27.84■■■□□ 2.05
PNKP-206ENST00000595792 SPATA31D1Q6ZQQ2 1576 aa27.84■■■□□ 2.05
PNKP-206ENST00000595792 NLRP1Q9C000 1473 aa27.83■■■□□ 2.05
PNKP-206ENST00000595792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.82■■■□□ 2.04
PNKP-206ENST00000595792 ERVK-7P63135 1459 aa27.82■■■□□ 2.04
PNKP-206ENST00000595792 PRDM15P57071 1507 aaPredicted RBP27.82■■■□□ 2.04
PNKP-206ENST00000595792 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
PNKP-206ENST00000595792 ERBINQ96RT1 1412 aa27.8■■■□□ 2.04
PNKP-206ENST00000595792 IQSEC2Q5JU85 1478 aa27.8■■■□□ 2.04
PNKP-206ENST00000595792 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
PNKP-206ENST00000595792 CHIC2Q9UKJ5 165 aa27.77■■■□□ 2.04
PNKP-206ENST00000595792 DEPDC5O75140 1603 aa27.77■■■□□ 2.04
PNKP-206ENST00000595792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.73■■■□□ 2.03
PNKP-206ENST00000595792 THEMISQ8N1K5 641 aaPredicted RBP27.72■■■□□ 2.03
PNKP-206ENST00000595792 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
PNKP-206ENST00000595792 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
PNKP-206ENST00000595792 ANKLE2Q86XL3 938 aa27.69■■■□□ 2.02
PNKP-206ENST00000595792 FAM50AQ14320 339 aaKnown RBP27.68■■■□□ 2.02
PNKP-206ENST00000595792 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
PNKP-206ENST00000595792 VWDEQ8N2E2 1590 aa27.67■■■□□ 2.02
PNKP-206ENST00000595792 IQGAP1P46940 1657 aa27.66■■■□□ 2.02
PNKP-206ENST00000595792 MED14O60244 1454 aa27.66■■■□□ 2.02
PNKP-206ENST00000595792 ARHGAP31Q2M1Z3 1444 aa27.66■■■□□ 2.02
PNKP-206ENST00000595792 ADGRL2O95490 1459 aa27.65■■■□□ 2.02
PNKP-206ENST00000595792 UBAP1LF5GYI3 381 aa27.63■■■□□ 2.01
PNKP-206ENST00000595792 KANK1Q14678 1352 aa27.61■■■□□ 2.01
PNKP-206ENST00000595792 PIK3C2BO00750 1634 aa27.61■■■□□ 2.01
PNKP-206ENST00000595792 PPARGC1BQ86YN6 1023 aaKnown RBP27.61■■■□□ 2.01
PNKP-206ENST00000595792 CPS1P31327 1500 aa27.61■■■□□ 2.01
PNKP-206ENST00000595792 LMTK2Q8IWU2 1503 aa27.6■■■□□ 2.01
PNKP-206ENST00000595792 STRCP1A6NGW2 1772 aa27.57■■■□□ 2
PNKP-206ENST00000595792 EFCAB6Q5THR3 1501 aa27.57■■■□□ 2
PNKP-206ENST00000595792 SYNMO15061 1565 aa27.56■■■□□ 2
PNKP-206ENST00000595792 SCAF11Q99590 1463 aaKnown RBP27.55■■■□□ 2
PNKP-206ENST00000595792 SLIT1O75093 1534 aa27.54■■■□□ 2
PNKP-206ENST00000595792 ARHGAP23Q9P227 1491 aa27.54■■■□□ 2
PNKP-206ENST00000595792 ANKRD50Q9ULJ7 1429 aa27.52■■■□□ 2
PNKP-206ENST00000595792 DISP3Q9P2K9 1392 aa27.51■■□□□ 1.99
PNKP-206ENST00000595792 LTKP29376 864 aa27.51■■□□□ 1.99
PNKP-206ENST00000595792 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
PNKP-206ENST00000595792 NOS1P29475 1434 aa27.47■■□□□ 1.99
PNKP-206ENST00000595792 SCAF1Q9H7N4 1312 aaKnown RBP27.46■■□□□ 1.99
PNKP-206ENST00000595792 ALKQ9UM73 1620 aa27.45■■□□□ 1.99
PNKP-206ENST00000595792 UNC13BO14795 1591 aa27.45■■□□□ 1.99
PNKP-206ENST00000595792 PIP4K2BP78356 416 aa27.45■■□□□ 1.98
PNKP-206ENST00000595792 IDI1Q13907 227 aa27.45■■□□□ 1.98
PNKP-206ENST00000595792 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
PNKP-206ENST00000595792 KDM5AP29375 1690 aaKnown RBP27.44■■□□□ 1.98
PNKP-206ENST00000595792 LRRC7Q96NW7 1537 aa27.44■■□□□ 1.98
PNKP-206ENST00000595792 TET3O43151 1660 aa27.43■■□□□ 1.98
PNKP-206ENST00000595792 ADGRB3O60242 1522 aa27.43■■□□□ 1.98
PNKP-206ENST00000595792 STAG3Q9UJ98 1225 aa27.43■■□□□ 1.98
PNKP-206ENST00000595792 ITGAEP38570 1179 aa27.39■■□□□ 1.98
PNKP-206ENST00000595792 EID1Q9Y6B2 187 aa27.39■■□□□ 1.98
PNKP-206ENST00000595792 GCC2Q8IWJ2 1684 aa27.39■■□□□ 1.97
PNKP-206ENST00000595792 TOM1O60784 492 aa27.38■■□□□ 1.97
PNKP-206ENST00000595792 ILDR2Q71H61 639 aa27.38■■□□□ 1.97
PNKP-206ENST00000595792 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
PNKP-206ENST00000595792 ROCK1Q13464 1354 aa27.36■■□□□ 1.97
PNKP-206ENST00000595792 HSPA1LP34931 641 aa27.36■■□□□ 1.97
PNKP-206ENST00000595792 MYO5BQ9ULV0 1848 aa27.36■■□□□ 1.97
PNKP-206ENST00000595792 E9PCH4 1651 aa27.34■■□□□ 1.97
PNKP-206ENST00000595792 XIRP1Q702N8 1843 aaKnown RBP27.34■■□□□ 1.97
PNKP-206ENST00000595792 IQGAP3Q86VI3 1631 aa27.33■■□□□ 1.97
PNKP-206ENST00000595792 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
PNKP-206ENST00000595792 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
PNKP-206ENST00000595792 SLC52A1Q9NWF4 448 aa27.3■■□□□ 1.96
PNKP-206ENST00000595792 TMEM131LA2VDJ0 1609 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms