RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 TCOF1Q13428 1488 aaKnown RBP39.54■■■■□ 3.92
ZNF558-203ENST00000595786 SHANK2Q9UPX8 1470 aa39.53■■■■□ 3.92
ZNF558-203ENST00000595786 PTPRTO14522 1441 aa39.52■■■■□ 3.92
ZNF558-203ENST00000595786 ABCC5O15440 1437 aa39.52■■■■□ 3.92
ZNF558-203ENST00000595786 NCOA1Q15788 1441 aa39.5■■■■□ 3.91
ZNF558-203ENST00000595786 EIF2AK4Q9P2K8 1649 aaKnown RBP39.5■■■■□ 3.91
ZNF558-203ENST00000595786 RNF17Q9BXT8 1623 aaKnown RBP39.48■■■■□ 3.91
ZNF558-203ENST00000595786 DUOX2Q9NRD8 1548 aa39.48■■■■□ 3.91
ZNF558-203ENST00000595786 PZPP20742 1482 aa39.48■■■■□ 3.91
ZNF558-203ENST00000595786 MYO3AQ8NEV4 1616 aa39.47■■■■□ 3.91
ZNF558-203ENST00000595786 ZNF142P52746 1687 aaPredicted RBP39.47■■■■□ 3.91
ZNF558-203ENST00000595786 DAPK1P53355 1430 aa39.45■■■■□ 3.91
ZNF558-203ENST00000595786 CAMSAP1Q5T5Y3 1602 aa39.44■■■■□ 3.9
ZNF558-203ENST00000595786 CROCC2H7BZ55 1655 aa39.44■■■■□ 3.9
ZNF558-203ENST00000595786 DNMT1P26358 1616 aaKnown RBP39.43■■■■□ 3.9
ZNF558-203ENST00000595786 CEP170BQ9Y4F5 1589 aaPredicted RBP39.43■■■■□ 3.9
ZNF558-203ENST00000595786 CERKQ8TCT0 537 aa39.42■■■■□ 3.9
ZNF558-203ENST00000595786 KIF15Q9NS87 1388 aa39.42■■■■□ 3.9
ZNF558-203ENST00000595786 FBXO31Q5XUX0 539 aaPredicted RBP39.4■■■■□ 3.9
ZNF558-203ENST00000595786 TNRQ92752 1358 aa39.4■■■■□ 3.9
ZNF558-203ENST00000595786 PLA2R1Q13018 1463 aa39.4■■■■□ 3.9
ZNF558-203ENST00000595786 A2ML1A8K2U0 1454 aa39.39■■■■□ 3.9
ZNF558-203ENST00000595786 PKD2Q13563 968 aa39.37■■■■□ 3.89
ZNF558-203ENST00000595786 ZC3H13Q5T200 1668 aaKnown RBP39.36■■■■□ 3.89
ZNF558-203ENST00000595786 RRP7BPQ9NSQ0 103 aa39.36■■■■□ 3.89
ZNF558-203ENST00000595786 ERBINQ96RT1 1412 aa39.36■■■■□ 3.89
ZNF558-203ENST00000595786 ABCC3O15438 1527 aa39.35■■■■□ 3.89
ZNF558-203ENST00000595786 ANKRD30AQ9BXX3 1397 aa39.33■■■■□ 3.89
ZNF558-203ENST00000595786 MROH1Q8NDA8 1641 aa39.31■■■■□ 3.88
ZNF558-203ENST00000595786 NCKAP5LQ9HCH0 1330 aa39.29■■■■□ 3.88
ZNF558-203ENST00000595786 NLRP1Q9C000 1473 aa39.27■■■■□ 3.88
ZNF558-203ENST00000595786 CHIC2Q9UKJ5 165 aa39.25■■■■□ 3.87
ZNF558-203ENST00000595786 FAM50AQ14320 339 aaKnown RBP39.23■■■■□ 3.87
ZNF558-203ENST00000595786 PRDM15P57071 1507 aaPredicted RBP39.22■■■■□ 3.87
ZNF558-203ENST00000595786 ADGRL2O95490 1459 aa39.21■■■■□ 3.87
ZNF558-203ENST00000595786 THEMISQ8N1K5 641 aaPredicted RBP39.2■■■■□ 3.87
ZNF558-203ENST00000595786 SPATA31D1Q6ZQQ2 1576 aa39.2■■■■□ 3.87
ZNF558-203ENST00000595786 ARHGAP31Q2M1Z3 1444 aa39.18■■■■□ 3.86
ZNF558-203ENST00000595786 DEPDC5O75140 1603 aa39.16■■■■□ 3.86
ZNF558-203ENST00000595786 CEP152O94986 1710 aa39.16■■■■□ 3.86
ZNF558-203ENST00000595786 KANK1Q14678 1352 aa39.16■■■■□ 3.86
ZNF558-203ENST00000595786 ERVK-7P63135 1459 aa39.16■■■■□ 3.86
ZNF558-203ENST00000595786 LTBP4Q8N2S1 1624 aa39.14■■■■□ 3.86
ZNF558-203ENST00000595786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.12■■■■□ 3.85
ZNF558-203ENST00000595786 UGGT1Q9NYU2 1555 aa39.12■■■■□ 3.85
ZNF558-203ENST00000595786 ANKLE2Q86XL3 938 aa39.1■■■■□ 3.85
ZNF558-203ENST00000595786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.07■■■■□ 3.84
ZNF558-203ENST00000595786 IQSEC2Q5JU85 1478 aa39.06■■■■□ 3.84
ZNF558-203ENST00000595786 CFAP65Q6ZU64 1925 aaKnown RBP39.04■■■■□ 3.84
ZNF558-203ENST00000595786 LMTK2Q8IWU2 1503 aa39.04■■■■□ 3.84
ZNF558-203ENST00000595786 VWDEQ8N2E2 1590 aa39.04■■■■□ 3.84
ZNF558-203ENST00000595786 POLR1AO95602 1720 aaPredicted RBP39.03■■■■□ 3.84
ZNF558-203ENST00000595786 ANKRD50Q9ULJ7 1429 aa39.02■■■■□ 3.84
ZNF558-203ENST00000595786 ZNF335Q9H4Z2 1342 aaPredicted RBP39■■■■□ 3.83
ZNF558-203ENST00000595786 NEURL4Q96JN8 1562 aa38.98■■■■□ 3.83
ZNF558-203ENST00000595786 MED14O60244 1454 aa38.97■■■■□ 3.83
ZNF558-203ENST00000595786 ROCK1Q13464 1354 aa38.96■■■■□ 3.83
ZNF558-203ENST00000595786 NPHP4O75161 1426 aaPredicted RBP38.89■■■■□ 3.82
ZNF558-203ENST00000595786 UBR1Q8IWV7 1749 aa38.89■■■■□ 3.82
ZNF558-203ENST00000595786 PPARGC1BQ86YN6 1023 aaKnown RBP38.88■■■■□ 3.81
ZNF558-203ENST00000595786 EFCAB6Q5THR3 1501 aa38.86■■■■□ 3.81
ZNF558-203ENST00000595786 NOS1P29475 1434 aa38.82■■■■□ 3.81
ZNF558-203ENST00000595786 RPRD2Q5VT52 1461 aaKnown RBP38.81■■■■□ 3.8
ZNF558-203ENST00000595786 ARHGAP23Q9P227 1491 aa38.8■■■■□ 3.8
ZNF558-203ENST00000595786 SLIT1O75093 1534 aa38.8■■■■□ 3.8
ZNF558-203ENST00000595786 IDI1Q13907 227 aa38.79■■■■□ 3.8
ZNF558-203ENST00000595786 CPS1P31327 1500 aa38.79■■■■□ 3.8
ZNF558-203ENST00000595786 IQGAP1P46940 1657 aa38.78■■■■□ 3.8
ZNF558-203ENST00000595786 SLC52A1Q9NWF4 448 aa38.78■■■■□ 3.8
ZNF558-203ENST00000595786 KDM5AP29375 1690 aaKnown RBP38.78■■■■□ 3.8
ZNF558-203ENST00000595786 UNC13BO14795 1591 aa38.76■■■■□ 3.8
ZNF558-203ENST00000595786 SCAF11Q99590 1463 aaKnown RBP38.76■■■■□ 3.8
ZNF558-203ENST00000595786 STAG3Q9UJ98 1225 aa38.76■■■■□ 3.8
ZNF558-203ENST00000595786 PIK3C2BO00750 1634 aa38.75■■■■□ 3.79
ZNF558-203ENST00000595786 TXNDC2Q86VQ3 553 aa38.75■■■■□ 3.79
ZNF558-203ENST00000595786 EID1Q9Y6B2 187 aa38.75■■■■□ 3.79
ZNF558-203ENST00000595786 ITGAEP38570 1179 aa38.74■■■■□ 3.79
ZNF558-203ENST00000595786 TET3O43151 1660 aa38.73■■■■□ 3.79
ZNF558-203ENST00000595786 SYNMO15061 1565 aa38.73■■■■□ 3.79
ZNF558-203ENST00000595786 LTKP29376 864 aa38.72■■■■□ 3.79
ZNF558-203ENST00000595786 RRBP1Q9P2E9 1410 aaKnown RBP38.72■■■■□ 3.79
ZNF558-203ENST00000595786 TMEM2Q9UHN6 1383 aa38.71■■■■□ 3.79
ZNF558-203ENST00000595786 UBAP1LF5GYI3 381 aa38.67■■■■□ 3.78
ZNF558-203ENST00000595786 GCC2Q8IWJ2 1684 aa38.66■■■■□ 3.78
ZNF558-203ENST00000595786 IQGAP3Q86VI3 1631 aa38.61■■■■□ 3.77
ZNF558-203ENST00000595786 NUP155O75694 1391 aa38.6■■■■□ 3.77
ZNF558-203ENST00000595786 ADGRB3O60242 1522 aa38.59■■■■□ 3.77
ZNF558-203ENST00000595786 TOM1O60784 492 aa38.54■■■■□ 3.76
ZNF558-203ENST00000595786 E9PCH4 1651 aa38.52■■■■□ 3.76
ZNF558-203ENST00000595786 HDGFP51858 240 aaKnown RBP38.5■■■■□ 3.75
ZNF558-203ENST00000595786 STRCP1A6NGW2 1772 aa38.49■■■■□ 3.75
ZNF558-203ENST00000595786 LRRC7Q96NW7 1537 aa38.48■■■■□ 3.75
ZNF558-203ENST00000595786 NAIPQ13075 1403 aa38.44■■■■□ 3.74
ZNF558-203ENST00000595786 TMEM131LA2VDJ0 1609 aa38.43■■■■□ 3.74
ZNF558-203ENST00000595786 ZFYVE9O95405 1425 aa38.41■■■■□ 3.74
ZNF558-203ENST00000595786 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.38■■■■□ 3.73
ZNF558-203ENST00000595786 RIMS2Q9UQ26 1411 aa38.38■■■■□ 3.73
ZNF558-203ENST00000595786 KCNA6P17658 529 aa38.37■■■■□ 3.73
ZNF558-203ENST00000595786 MYO5BQ9ULV0 1848 aa38.37■■■■□ 3.73
ZNF558-203ENST00000595786 SLC26A8Q96RN1 970 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms