RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ABCC5O15440 1437 aa26.73■■□□□ 1.87
IRF3-208ENST00000594387 DUOX2Q9NRD8 1548 aa26.73■■□□□ 1.87
IRF3-208ENST00000594387 FAM135AQ9P2D6 1515 aa26.73■■□□□ 1.87
IRF3-208ENST00000594387 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.87
IRF3-208ENST00000594387 RRP7BPQ9NSQ0 103 aa26.69■■□□□ 1.86
IRF3-208ENST00000594387 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
IRF3-208ENST00000594387 CHIC2Q9UKJ5 165 aa26.67■■□□□ 1.86
IRF3-208ENST00000594387 RNF17Q9BXT8 1623 aaKnown RBP26.67■■□□□ 1.86
IRF3-208ENST00000594387 KIF15Q9NS87 1388 aa26.67■■□□□ 1.86
IRF3-208ENST00000594387 ZC3H13Q5T200 1668 aaKnown RBP26.66■■□□□ 1.86
IRF3-208ENST00000594387 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
IRF3-208ENST00000594387 PTPRKQ15262 1439 aa26.64■■□□□ 1.85
IRF3-208ENST00000594387 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
IRF3-208ENST00000594387 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
IRF3-208ENST00000594387 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
IRF3-208ENST00000594387 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
IRF3-208ENST00000594387 CEP152O94986 1710 aa26.59■■□□□ 1.85
IRF3-208ENST00000594387 STRCQ7RTU9 1775 aa26.58■■□□□ 1.85
IRF3-208ENST00000594387 ZNF142P52746 1687 aaPredicted RBP26.57■■□□□ 1.84
IRF3-208ENST00000594387 PZPP20742 1482 aa26.57■■□□□ 1.84
IRF3-208ENST00000594387 KANK1Q14678 1352 aa26.56■■□□□ 1.84
IRF3-208ENST00000594387 NCOA1Q15788 1441 aa26.56■■□□□ 1.84
IRF3-208ENST00000594387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.55■■□□□ 1.845e-6■■■□□ 18.6
IRF3-208ENST00000594387 CEP170BQ9Y4F5 1589 aaPredicted RBP26.54■■□□□ 1.84
IRF3-208ENST00000594387 TNRQ92752 1358 aa26.54■■□□□ 1.84
IRF3-208ENST00000594387 ABCC3O15438 1527 aa26.54■■□□□ 1.84
IRF3-208ENST00000594387 FBXO31Q5XUX0 539 aaPredicted RBP26.53■■□□□ 1.84
IRF3-208ENST00000594387 ADGRL2O95490 1459 aa26.53■■□□□ 1.84
IRF3-208ENST00000594387 CAMSAP1Q5T5Y3 1602 aa26.53■■□□□ 1.84
IRF3-208ENST00000594387 MROH1Q8NDA8 1641 aa26.51■■□□□ 1.83
IRF3-208ENST00000594387 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
IRF3-208ENST00000594387 PRDM15P57071 1507 aaPredicted RBP26.49■■□□□ 1.83
IRF3-208ENST00000594387 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
IRF3-208ENST00000594387 ITGAEP38570 1179 aa26.48■■□□□ 1.83
IRF3-208ENST00000594387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.46■■□□□ 1.833e-6■□□□□ 11.3
IRF3-208ENST00000594387 PTPRTO14522 1441 aa26.44■■□□□ 1.82
IRF3-208ENST00000594387 ANKRD50Q9ULJ7 1429 aa26.44■■□□□ 1.82
IRF3-208ENST00000594387 NLRP1Q9C000 1473 aa26.43■■□□□ 1.82
IRF3-208ENST00000594387 PKD2Q13563 968 aa26.43■■□□□ 1.82
IRF3-208ENST00000594387 PLA2R1Q13018 1463 aa26.42■■□□□ 1.82
IRF3-208ENST00000594387 THEMISQ8N1K5 641 aaPredicted RBP26.41■■□□□ 1.82
IRF3-208ENST00000594387 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
IRF3-208ENST00000594387 ROCK1Q13464 1354 aa26.4■■□□□ 1.82
IRF3-208ENST00000594387 NCKAP5LQ9HCH0 1330 aa26.39■■□□□ 1.82
IRF3-208ENST00000594387 ILDR1Q86SU0 546 aaPredicted RBP26.39■■□□□ 1.82
IRF3-208ENST00000594387 ARHGAP31Q2M1Z3 1444 aa26.39■■□□□ 1.81
IRF3-208ENST00000594387 UGGT1Q9NYU2 1555 aa26.38■■□□□ 1.81
IRF3-208ENST00000594387 ERVK-7P63135 1459 aa26.38■■□□□ 1.81
IRF3-208ENST00000594387 POLR1AO95602 1720 aaPredicted RBP26.37■■□□□ 1.81
IRF3-208ENST00000594387 LMTK2Q8IWU2 1503 aa26.34■■□□□ 1.81
IRF3-208ENST00000594387 ANKLE2Q86XL3 938 aa26.33■■□□□ 1.81
IRF3-208ENST00000594387 CERKQ8TCT0 537 aa26.33■■□□□ 1.81
IRF3-208ENST00000594387 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.8
IRF3-208ENST00000594387 RRBP1Q9P2E9 1410 aaKnown RBP26.32■■□□□ 1.8
IRF3-208ENST00000594387 FBXO41Q8TF61 875 aa26.32■■□□□ 1.8
IRF3-208ENST00000594387 STAG3Q9UJ98 1225 aa26.29■■□□□ 1.8
IRF3-208ENST00000594387 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
IRF3-208ENST00000594387 UNC13BO14795 1591 aa26.28■■□□□ 1.8
IRF3-208ENST00000594387 TET3O43151 1660 aa26.28■■□□□ 1.8
IRF3-208ENST00000594387 EFCAB6Q5THR3 1501 aa26.27■■□□□ 1.8
IRF3-208ENST00000594387 UBR1Q8IWV7 1749 aa26.27■■□□□ 1.8
IRF3-208ENST00000594387 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
IRF3-208ENST00000594387 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
IRF3-208ENST00000594387 IQGAP3Q86VI3 1631 aa26.2■■□□□ 1.78
IRF3-208ENST00000594387 NUP155O75694 1391 aa26.2■■□□□ 1.78
IRF3-208ENST00000594387 KDM5AP29375 1690 aaKnown RBP26.19■■□□□ 1.78
IRF3-208ENST00000594387 SLC52A1Q9NWF4 448 aa26.18■■□□□ 1.78
IRF3-208ENST00000594387 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
IRF3-208ENST00000594387 NEURL4Q96JN8 1562 aa26.17■■□□□ 1.78
IRF3-208ENST00000594387 IQGAP1P46940 1657 aa26.17■■□□□ 1.78
IRF3-208ENST00000594387 NPHP4O75161 1426 aaPredicted RBP26.16■■□□□ 1.78
IRF3-208ENST00000594387 IDI1Q13907 227 aa26.16■■□□□ 1.78
IRF3-208ENST00000594387 NOS1P29475 1434 aa26.15■■□□□ 1.78
IRF3-208ENST00000594387 LTBP4Q8N2S1 1624 aa26.15■■□□□ 1.78
IRF3-208ENST00000594387 SYNMO15061 1565 aa26.15■■□□□ 1.78
IRF3-208ENST00000594387 E9PCH4 1651 aa26.15■■□□□ 1.78
IRF3-208ENST00000594387 ZNF335Q9H4Z2 1342 aaPredicted RBP26.14■■□□□ 1.78
IRF3-208ENST00000594387 TXNDC2Q86VQ3 553 aa26.14■■□□□ 1.78
IRF3-208ENST00000594387 MED14O60244 1454 aa26.13■■□□□ 1.77
IRF3-208ENST00000594387 SLIT1O75093 1534 aa26.1■■□□□ 1.77
IRF3-208ENST00000594387 IQSEC2Q5JU85 1478 aa26.1■■□□□ 1.77
IRF3-208ENST00000594387 SCAF11Q99590 1463 aaKnown RBP26.1■■□□□ 1.77
IRF3-208ENST00000594387 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
IRF3-208ENST00000594387 NAIPQ13075 1403 aa26.07■■□□□ 1.76
IRF3-208ENST00000594387 ARHGAP23Q9P227 1491 aa26.07■■□□□ 1.76
IRF3-208ENST00000594387 HDGFP51858 240 aaKnown RBP26.07■■□□□ 1.76
IRF3-208ENST00000594387 ADGRB3O60242 1522 aa26.07■■□□□ 1.76
IRF3-208ENST00000594387 TMEM2Q9UHN6 1383 aa26.07■■□□□ 1.76
IRF3-208ENST00000594387 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
IRF3-208ENST00000594387 CHGAP10645 457 aaKnown RBP26.05■■□□□ 1.76
IRF3-208ENST00000594387 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
IRF3-208ENST00000594387 CPS1P31327 1500 aa26.04■■□□□ 1.76
IRF3-208ENST00000594387 LTKP29376 864 aa26.03■■□□□ 1.76
IRF3-208ENST00000594387 SPHKAPQ2M3C7 1700 aa26.02■■□□□ 1.76
IRF3-208ENST00000594387 BCANQ96GW7 911 aa26.01■■□□□ 1.75
IRF3-208ENST00000594387 PPP1R15AO75807 674 aaPredicted RBP25.98■■□□□ 1.75
IRF3-208ENST00000594387 TMEM131LA2VDJ0 1609 aa25.98■■□□□ 1.75
IRF3-208ENST00000594387 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
IRF3-208ENST00000594387 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.94■■□□□ 1.74
IRF3-208ENST00000594387 ACIN1Q9UKV3 1341 aaKnown RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms