RNA–Protein interactions for RNA: ENST00000594261.5

LINC01872-201, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 5 BASIC

Gene LINC01872, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-201ENST00000594261 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
LINC01872-201ENST00000594261 FAM50AQ14320 339 aaKnown RBP17.39■□□□□ 0.37
LINC01872-201ENST00000594261 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
LINC01872-201ENST00000594261 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
LINC01872-201ENST00000594261 DUOX2Q9NRD8 1548 aa17.36■□□□□ 0.37
LINC01872-201ENST00000594261 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
LINC01872-201ENST00000594261 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
LINC01872-201ENST00000594261 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
LINC01872-201ENST00000594261 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.36
LINC01872-201ENST00000594261 CHIC2Q9UKJ5 165 aa17.33■□□□□ 0.36
LINC01872-201ENST00000594261 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
LINC01872-201ENST00000594261 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
LINC01872-201ENST00000594261 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
LINC01872-201ENST00000594261 HSPA2P54652 639 aa17.32■□□□□ 0.36
LINC01872-201ENST00000594261 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
LINC01872-201ENST00000594261 WASHC2CQ9Y4E1 1318 aa17.31■□□□□ 0.36
LINC01872-201ENST00000594261 NPATQ14207 1427 aa17.3■□□□□ 0.36
LINC01872-201ENST00000594261 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
LINC01872-201ENST00000594261 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
LINC01872-201ENST00000594261 PTPRKQ15262 1439 aa17.27■□□□□ 0.35
LINC01872-201ENST00000594261 NCOA1Q15788 1441 aa17.27■□□□□ 0.35
LINC01872-201ENST00000594261 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
LINC01872-201ENST00000594261 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
LINC01872-201ENST00000594261 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
LINC01872-201ENST00000594261 CEP152O94986 1710 aa17.25■□□□□ 0.35
LINC01872-201ENST00000594261 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
LINC01872-201ENST00000594261 ABCC3O15438 1527 aa17.24■□□□□ 0.35
LINC01872-201ENST00000594261 PZPP20742 1482 aa17.24■□□□□ 0.35
LINC01872-201ENST00000594261 ITGAEP38570 1179 aa17.23■□□□□ 0.35
LINC01872-201ENST00000594261 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
LINC01872-201ENST00000594261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC01872-201ENST00000594261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC01872-201ENST00000594261 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
LINC01872-201ENST00000594261 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
LINC01872-201ENST00000594261 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
LINC01872-201ENST00000594261 KANK1Q14678 1352 aa17.2■□□□□ 0.34
LINC01872-201ENST00000594261 CFAP65Q6ZU64 1925 aaKnown RBP17.2■□□□□ 0.34
LINC01872-201ENST00000594261 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
LINC01872-201ENST00000594261 ANKRD50Q9ULJ7 1429 aa17.2■□□□□ 0.34
LINC01872-201ENST00000594261 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
LINC01872-201ENST00000594261 TNRQ92752 1358 aa17.19■□□□□ 0.34
LINC01872-201ENST00000594261 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
LINC01872-201ENST00000594261 STRCQ7RTU9 1775 aa17.17■□□□□ 0.34
LINC01872-201ENST00000594261 ROCK1Q13464 1354 aa17.17■□□□□ 0.34
LINC01872-201ENST00000594261 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
LINC01872-201ENST00000594261 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
LINC01872-201ENST00000594261 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
LINC01872-201ENST00000594261 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
LINC01872-201ENST00000594261 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
LINC01872-201ENST00000594261 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
LINC01872-201ENST00000594261 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
LINC01872-201ENST00000594261 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
LINC01872-201ENST00000594261 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
LINC01872-201ENST00000594261 UNC13BO14795 1591 aa17.1■□□□□ 0.33
LINC01872-201ENST00000594261 UGGT1Q9NYU2 1555 aa17.08■□□□□ 0.32
LINC01872-201ENST00000594261 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
LINC01872-201ENST00000594261 PTPRTO14522 1441 aa17.07■□□□□ 0.32
LINC01872-201ENST00000594261 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
LINC01872-201ENST00000594261 PKD2Q13563 968 aa17.06■□□□□ 0.32
LINC01872-201ENST00000594261 TET3O43151 1660 aa17.06■□□□□ 0.32
LINC01872-201ENST00000594261 POLR1AO95602 1720 aaPredicted RBP17.05■□□□□ 0.32
LINC01872-201ENST00000594261 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
LINC01872-201ENST00000594261 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
LINC01872-201ENST00000594261 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
LINC01872-201ENST00000594261 UBR1Q8IWV7 1749 aa17.02■□□□□ 0.32
LINC01872-201ENST00000594261 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
LINC01872-201ENST00000594261 NUP155O75694 1391 aa17.02■□□□□ 0.31
LINC01872-201ENST00000594261 PIK3C2BO00750 1634 aa17■□□□□ 0.31
LINC01872-201ENST00000594261 NAIPQ13075 1403 aa17■□□□□ 0.31
LINC01872-201ENST00000594261 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
LINC01872-201ENST00000594261 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
LINC01872-201ENST00000594261 SYNMO15061 1565 aa16.99■□□□□ 0.31
LINC01872-201ENST00000594261 NOS1P29475 1434 aa16.99■□□□□ 0.31
LINC01872-201ENST00000594261 E9PCH4 1651 aa16.99■□□□□ 0.31
LINC01872-201ENST00000594261 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
LINC01872-201ENST00000594261 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
LINC01872-201ENST00000594261 IDI1Q13907 227 aa16.96■□□□□ 0.31
LINC01872-201ENST00000594261 CERKQ8TCT0 537 aa16.96■□□□□ 0.31
LINC01872-201ENST00000594261 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
LINC01872-201ENST00000594261 SLC52A1Q9NWF4 448 aa16.95■□□□□ 0.3
LINC01872-201ENST00000594261 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
LINC01872-201ENST00000594261 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
LINC01872-201ENST00000594261 ADGRB3O60242 1522 aa16.93■□□□□ 0.3
LINC01872-201ENST00000594261 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
LINC01872-201ENST00000594261 MED14O60244 1454 aa16.93■□□□□ 0.3
LINC01872-201ENST00000594261 SLIT1O75093 1534 aa16.92■□□□□ 0.3
LINC01872-201ENST00000594261 TRIM52Q96A61 297 aa16.92■□□□□ 0.3
LINC01872-201ENST00000594261 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
LINC01872-201ENST00000594261 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
LINC01872-201ENST00000594261 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
LINC01872-201ENST00000594261 LTBP4Q8N2S1 1624 aa16.92■□□□□ 0.3
LINC01872-201ENST00000594261 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
LINC01872-201ENST00000594261 FBXO41Q8TF61 875 aa16.91■□□□□ 0.3
LINC01872-201ENST00000594261 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
LINC01872-201ENST00000594261 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
LINC01872-201ENST00000594261 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
LINC01872-201ENST00000594261 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
LINC01872-201ENST00000594261 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
LINC01872-201ENST00000594261 LTKP29376 864 aa16.87■□□□□ 0.29
LINC01872-201ENST00000594261 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms