RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 MYOM3Q5VTT5 1437 aa26.41■■□□□ 1.82
LTBP4-209ENST00000594116 KIF3BO15066 747 aa26.41■■□□□ 1.82
LTBP4-209ENST00000594116 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
LTBP4-209ENST00000594116 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
LTBP4-209ENST00000594116 PLA2R1Q13018 1463 aa26.4■■□□□ 1.82
LTBP4-209ENST00000594116 PZPP20742 1482 aa26.36■■□□□ 1.81
LTBP4-209ENST00000594116 LTBP4Q8N2S1 1624 aa26.36■■□□□ 1.81
LTBP4-209ENST00000594116 RNF17Q9BXT8 1623 aaKnown RBP26.36■■□□□ 1.81
LTBP4-209ENST00000594116 A2ML1A8K2U0 1454 aa26.35■■□□□ 1.81
LTBP4-209ENST00000594116 TCOF1Q13428 1488 aaKnown RBP26.35■■□□□ 1.81
LTBP4-209ENST00000594116 EIF2AK4Q9P2K8 1649 aaKnown RBP26.34■■□□□ 1.81
LTBP4-209ENST00000594116 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
LTBP4-209ENST00000594116 PKD2Q13563 968 aa26.31■■□□□ 1.8
LTBP4-209ENST00000594116 WASHC2CQ9Y4E1 1318 aa26.31■■□□□ 1.8
LTBP4-209ENST00000594116 ZC3H13Q5T200 1668 aaKnown RBP26.3■■□□□ 1.8
LTBP4-209ENST00000594116 NCKAP5LQ9HCH0 1330 aa26.3■■□□□ 1.8
LTBP4-209ENST00000594116 TNRQ92752 1358 aa26.29■■□□□ 1.8
LTBP4-209ENST00000594116 IQSEC2Q5JU85 1478 aa26.29■■□□□ 1.8
LTBP4-209ENST00000594116 CROCC2H7BZ55 1655 aa26.28■■□□□ 1.8
LTBP4-209ENST00000594116 PTPN23Q9H3S7 1636 aa26.26■■□□□ 1.79
LTBP4-209ENST00000594116 FBXO31Q5XUX0 539 aaPredicted RBP26.26■■□□□ 1.79
LTBP4-209ENST00000594116 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
LTBP4-209ENST00000594116 MROH1Q8NDA8 1641 aa26.25■■□□□ 1.79
LTBP4-209ENST00000594116 ABCC3O15438 1527 aa26.24■■□□□ 1.79
LTBP4-209ENST00000594116 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
LTBP4-209ENST00000594116 POLR1AO95602 1720 aaPredicted RBP26.24■■□□□ 1.79
LTBP4-209ENST00000594116 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
LTBP4-209ENST00000594116 ABCC5O15440 1437 aa26.2■■□□□ 1.78
LTBP4-209ENST00000594116 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
LTBP4-209ENST00000594116 SPATA31D1Q6ZQQ2 1576 aa26.18■■□□□ 1.78
LTBP4-209ENST00000594116 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
LTBP4-209ENST00000594116 ZNF335Q9H4Z2 1342 aaPredicted RBP26.17■■□□□ 1.78
LTBP4-209ENST00000594116 CEP152O94986 1710 aa26.17■■□□□ 1.78
LTBP4-209ENST00000594116 NEURL4Q96JN8 1562 aa26.17■■□□□ 1.78
LTBP4-209ENST00000594116 ERBINQ96RT1 1412 aa26.16■■□□□ 1.78
LTBP4-209ENST00000594116 KIF15Q9NS87 1388 aa26.16■■□□□ 1.78
LTBP4-209ENST00000594116 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
LTBP4-209ENST00000594116 DAPK1P53355 1430 aa26.15■■□□□ 1.78
LTBP4-209ENST00000594116 PRDM15P57071 1507 aaPredicted RBP26.15■■□□□ 1.78
LTBP4-209ENST00000594116 ERVK-7P63135 1459 aa26.13■■□□□ 1.77
LTBP4-209ENST00000594116 DEPDC5O75140 1603 aa26.11■■□□□ 1.77
LTBP4-209ENST00000594116 THEMISQ8N1K5 641 aaPredicted RBP26.11■■□□□ 1.77
LTBP4-209ENST00000594116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.1■■□□□ 1.77
LTBP4-209ENST00000594116 MED14O60244 1454 aa26.07■■□□□ 1.76
LTBP4-209ENST00000594116 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
LTBP4-209ENST00000594116 RRP7BPQ9NSQ0 103 aa26.07■■□□□ 1.76
LTBP4-209ENST00000594116 ARHGAP31Q2M1Z3 1444 aa26.06■■□□□ 1.76
LTBP4-209ENST00000594116 CFAP65Q6ZU64 1925 aaKnown RBP26.06■■□□□ 1.76
LTBP4-209ENST00000594116 ANKRD30AQ9BXX3 1397 aa26.04■■□□□ 1.76
LTBP4-209ENST00000594116 CPS1P31327 1500 aa26.04■■□□□ 1.76
LTBP4-209ENST00000594116 UBR1Q8IWV7 1749 aa26.03■■□□□ 1.76
LTBP4-209ENST00000594116 NPHP4O75161 1426 aaPredicted RBP26.02■■□□□ 1.76
LTBP4-209ENST00000594116 IQGAP1P46940 1657 aa26.02■■□□□ 1.76
LTBP4-209ENST00000594116 VWDEQ8N2E2 1590 aa26■■□□□ 1.75
LTBP4-209ENST00000594116 ADGRL2O95490 1459 aa26■■□□□ 1.75
LTBP4-209ENST00000594116 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
LTBP4-209ENST00000594116 LMTK2Q8IWU2 1503 aa25.98■■□□□ 1.75
LTBP4-209ENST00000594116 KANK1Q14678 1352 aa25.98■■□□□ 1.75
LTBP4-209ENST00000594116 UBAP1LF5GYI3 381 aa25.96■■□□□ 1.75
LTBP4-209ENST00000594116 CHIC2Q9UKJ5 165 aa25.96■■□□□ 1.75
LTBP4-209ENST00000594116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.74
LTBP4-209ENST00000594116 SLIT1O75093 1534 aa25.93■■□□□ 1.74
LTBP4-209ENST00000594116 ARHGAP23Q9P227 1491 aa25.92■■□□□ 1.74
LTBP4-209ENST00000594116 PIK3C2BO00750 1634 aa25.91■■□□□ 1.74
LTBP4-209ENST00000594116 SCAF11Q99590 1463 aaKnown RBP25.91■■□□□ 1.74
LTBP4-209ENST00000594116 KDM5AP29375 1690 aaKnown RBP25.9■■□□□ 1.74
LTBP4-209ENST00000594116 EFCAB6Q5THR3 1501 aa25.89■■□□□ 1.74
LTBP4-209ENST00000594116 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.74
LTBP4-209ENST00000594116 STRCP1A6NGW2 1772 aa25.87■■□□□ 1.73
LTBP4-209ENST00000594116 DISP3Q9P2K9 1392 aa25.86■■□□□ 1.73
LTBP4-209ENST00000594116 SYNMO15061 1565 aa25.86■■□□□ 1.73
LTBP4-209ENST00000594116 ANKRD50Q9ULJ7 1429 aa25.85■■□□□ 1.73
LTBP4-209ENST00000594116 NOS1P29475 1434 aa25.83■■□□□ 1.73
LTBP4-209ENST00000594116 LTKP29376 864 aa25.82■■□□□ 1.72
LTBP4-209ENST00000594116 TOM1O60784 492 aa25.81■■□□□ 1.72
LTBP4-209ENST00000594116 TMEM2Q9UHN6 1383 aa25.81■■□□□ 1.72
LTBP4-209ENST00000594116 RPRD2Q5VT52 1461 aaKnown RBP25.8■■□□□ 1.72
LTBP4-209ENST00000594116 TXNDC2Q86VQ3 553 aa25.8■■□□□ 1.72
LTBP4-209ENST00000594116 LRRC7Q96NW7 1537 aa25.79■■□□□ 1.72
LTBP4-209ENST00000594116 TET3O43151 1660 aa25.79■■□□□ 1.72
LTBP4-209ENST00000594116 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
LTBP4-209ENST00000594116 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
LTBP4-209ENST00000594116 UNC13BO14795 1591 aa25.78■■□□□ 1.72
LTBP4-209ENST00000594116 IDI1Q13907 227 aa25.77■■□□□ 1.72
LTBP4-209ENST00000594116 ADGRB3O60242 1522 aa25.77■■□□□ 1.72
LTBP4-209ENST00000594116 STAG3Q9UJ98 1225 aa25.76■■□□□ 1.71
LTBP4-209ENST00000594116 GCC2Q8IWJ2 1684 aa25.76■■□□□ 1.71
LTBP4-209ENST00000594116 ROCK1Q13464 1354 aa25.75■■□□□ 1.71
LTBP4-209ENST00000594116 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
LTBP4-209ENST00000594116 PIP4K2BP78356 416 aa25.73■■□□□ 1.71
LTBP4-209ENST00000594116 SLC52A1Q9NWF4 448 aa25.72■■□□□ 1.71
LTBP4-209ENST00000594116 ILDR2Q71H61 639 aa25.7■■□□□ 1.7
LTBP4-209ENST00000594116 HSPA1LP34931 641 aa25.69■■□□□ 1.7
LTBP4-209ENST00000594116 XIRP1Q702N8 1843 aaKnown RBP25.69■■□□□ 1.7
LTBP4-209ENST00000594116 IQGAP3Q86VI3 1631 aa25.67■■□□□ 1.7
LTBP4-209ENST00000594116 MYO5BQ9ULV0 1848 aa25.65■■□□□ 1.7
LTBP4-209ENST00000594116 E9PCH4 1651 aa25.65■■□□□ 1.7
LTBP4-209ENST00000594116 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.7
LTBP4-209ENST00000594116 TMEM131LA2VDJ0 1609 aa25.63■■□□□ 1.69
LTBP4-209ENST00000594116 ZFYVE9O95405 1425 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms