RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 KIF15Q9NS87 1388 aa18.89■□□□□ 0.61
COLGALT1-202ENST00000593832 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
COLGALT1-202ENST00000593832 BRD4O60885 1362 aaPredicted RBP18.88■□□□□ 0.61
COLGALT1-202ENST00000593832 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
COLGALT1-202ENST00000593832 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
COLGALT1-202ENST00000593832 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
COLGALT1-202ENST00000593832 UHRF1BP1Q6BDS2 1440 aa18.86■□□□□ 0.61
COLGALT1-202ENST00000593832 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
COLGALT1-202ENST00000593832 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
COLGALT1-202ENST00000593832 NEFMP07197 916 aa18.85■□□□□ 0.61
COLGALT1-202ENST00000593832 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
COLGALT1-202ENST00000593832 PTPRGP23470 1445 aa18.85■□□□□ 0.61
COLGALT1-202ENST00000593832 MS4A1P11836 297 aa18.85■□□□□ 0.61
COLGALT1-202ENST00000593832 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
COLGALT1-202ENST00000593832 PKD2Q13563 968 aa18.84■□□□□ 0.61
COLGALT1-202ENST00000593832 RALBP1Q15311 655 aa18.83■□□□□ 0.61
COLGALT1-202ENST00000593832 ERCC6L2Q5T890 1561 aa18.82■□□□□ 0.6
COLGALT1-202ENST00000593832 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
COLGALT1-202ENST00000593832 WASHC2CQ9Y4E1 1318 aa18.81■□□□□ 0.6
COLGALT1-202ENST00000593832 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
COLGALT1-202ENST00000593832 TROQ12816 1431 aaPredicted RBP18.8■□□□□ 0.6
COLGALT1-202ENST00000593832 ST20-MTHFSA0A0A6YYL1 179 aa18.79■□□□□ 0.6
COLGALT1-202ENST00000593832 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
COLGALT1-202ENST00000593832 E9PCH4 1651 aa18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 ABCA8O94911 1581 aa18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
COLGALT1-202ENST00000593832 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
COLGALT1-202ENST00000593832 ATP10BO94823 1461 aa18.77■□□□□ 0.6
COLGALT1-202ENST00000593832 GLIPR1L2Q4G1C9 344 aa18.76■□□□□ 0.59
COLGALT1-202ENST00000593832 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
COLGALT1-202ENST00000593832 CDCA7LQ96GN5 454 aa18.75■□□□□ 0.59
COLGALT1-202ENST00000593832 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
COLGALT1-202ENST00000593832 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
COLGALT1-202ENST00000593832 GPATCH8Q9UKJ3 1502 aaKnown RBP18.72■□□□□ 0.59
COLGALT1-202ENST00000593832 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
COLGALT1-202ENST00000593832 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
COLGALT1-202ENST00000593832 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
COLGALT1-202ENST00000593832 PLIN1O60240 522 aa18.71■□□□□ 0.59
COLGALT1-202ENST00000593832 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
COLGALT1-202ENST00000593832 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
COLGALT1-202ENST00000593832 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
COLGALT1-202ENST00000593832 ITSN2Q9NZM3 1697 aa18.68■□□□□ 0.58
COLGALT1-202ENST00000593832 PER1O15534 1290 aaPredicted RBP18.68■□□□□ 0.58
COLGALT1-202ENST00000593832 DDRGK1Q96HY6 314 aa18.68■□□□□ 0.58
COLGALT1-202ENST00000593832 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
COLGALT1-202ENST00000593832 NUP155O75694 1391 aa18.67■□□□□ 0.58
COLGALT1-202ENST00000593832 DCAF11Q8TEB1 546 aa18.66■□□□□ 0.58
COLGALT1-202ENST00000593832 GSE1Q14687 1217 aa18.65■□□□□ 0.58
COLGALT1-202ENST00000593832 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.58
COLGALT1-202ENST00000593832 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
COLGALT1-202ENST00000593832 INSRP06213 1382 aa18.64■□□□□ 0.57
COLGALT1-202ENST00000593832 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
COLGALT1-202ENST00000593832 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
COLGALT1-202ENST00000593832 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
COLGALT1-202ENST00000593832 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
COLGALT1-202ENST00000593832 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
COLGALT1-202ENST00000593832 KDM2BQ8NHM5 1336 aa18.62■□□□□ 0.57
COLGALT1-202ENST00000593832 ZMYM4Q5VZL5 1548 aa18.62■□□□□ 0.57
COLGALT1-202ENST00000593832 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
COLGALT1-202ENST00000593832 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
COLGALT1-202ENST00000593832 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
COLGALT1-202ENST00000593832 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
COLGALT1-202ENST00000593832 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.57
COLGALT1-202ENST00000593832 ABCC2Q92887 1545 aa18.58■□□□□ 0.56
COLGALT1-202ENST00000593832 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
COLGALT1-202ENST00000593832 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
COLGALT1-202ENST00000593832 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
COLGALT1-202ENST00000593832 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
COLGALT1-202ENST00000593832 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
COLGALT1-202ENST00000593832 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
COLGALT1-202ENST00000593832 PLEKHH2Q8IVE3 1493 aa18.55■□□□□ 0.56
COLGALT1-202ENST00000593832 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
COLGALT1-202ENST00000593832 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
COLGALT1-202ENST00000593832 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
COLGALT1-202ENST00000593832 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
COLGALT1-202ENST00000593832 CENPQQ7L2Z9 268 aaPredicted RBP18.54■□□□□ 0.56
COLGALT1-202ENST00000593832 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
COLGALT1-202ENST00000593832 TESK2Q96S53 571 aa18.53■□□□□ 0.56
COLGALT1-202ENST00000593832 DISP3Q9P2K9 1392 aa18.52■□□□□ 0.56
COLGALT1-202ENST00000593832 FAM161AQ3B820 660 aa18.52■□□□□ 0.55
COLGALT1-202ENST00000593832 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
COLGALT1-202ENST00000593832 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
COLGALT1-202ENST00000593832 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
COLGALT1-202ENST00000593832 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
COLGALT1-202ENST00000593832 PANK3Q9H999 370 aa18.51■□□□□ 0.55
COLGALT1-202ENST00000593832 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
COLGALT1-202ENST00000593832 ADAMTS8Q9UP79 889 aa18.5■□□□□ 0.55
COLGALT1-202ENST00000593832 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
COLGALT1-202ENST00000593832 ARHGAP5Q13017 1502 aa18.49■□□□□ 0.55
COLGALT1-202ENST00000593832 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
COLGALT1-202ENST00000593832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
COLGALT1-202ENST00000593832 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
COLGALT1-202ENST00000593832 PDE4CQ08493 712 aa18.47■□□□□ 0.55
COLGALT1-202ENST00000593832 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
COLGALT1-202ENST00000593832 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
COLGALT1-202ENST00000593832 HSP90AA2PQ14568 343 aaPredicted RBP18.46■□□□□ 0.55
COLGALT1-202ENST00000593832 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms