RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 A2MP01023 1474 aa17.02■□□□□ 0.32
CACNA1A-213ENST00000593267 IQGAP3Q86VI3 1631 aa17.02■□□□□ 0.31
CACNA1A-213ENST00000593267 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-213ENST00000593267 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
CACNA1A-213ENST00000593267 REREQ9P2R6 1566 aa17■□□□□ 0.31
CACNA1A-213ENST00000593267 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
CACNA1A-213ENST00000593267 PTPRMP28827 1452 aa16.99■□□□□ 0.31
CACNA1A-213ENST00000593267 YEATS2Q9ULM3 1422 aa16.99■□□□□ 0.31
CACNA1A-213ENST00000593267 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
CACNA1A-213ENST00000593267 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-213ENST00000593267 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
CACNA1A-213ENST00000593267 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-213ENST00000593267 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
CACNA1A-213ENST00000593267 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
CACNA1A-213ENST00000593267 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-213ENST00000593267 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
CACNA1A-213ENST00000593267 NUP155O75694 1391 aa16.95■□□□□ 0.3
CACNA1A-213ENST00000593267 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
CACNA1A-213ENST00000593267 ATP10AO60312 1499 aa16.94■□□□□ 0.3
CACNA1A-213ENST00000593267 MADDQ8WXG6 1647 aa16.94■□□□□ 0.3
CACNA1A-213ENST00000593267 TET3O43151 1660 aa16.91■□□□□ 0.3
CACNA1A-213ENST00000593267 AGLP35573 1532 aa16.91■□□□□ 0.3
CACNA1A-213ENST00000593267 SIGLEC1Q9BZZ2 1709 aa16.91■□□□□ 0.3
CACNA1A-213ENST00000593267 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-213ENST00000593267 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
CACNA1A-213ENST00000593267 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-213ENST00000593267 KIF3BO15066 747 aa16.89■□□□□ 0.29
CACNA1A-213ENST00000593267 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
CACNA1A-213ENST00000593267 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-213ENST00000593267 CEP152O94986 1710 aa16.88■□□□□ 0.29
CACNA1A-213ENST00000593267 E9PCH4 1651 aa16.88■□□□□ 0.29
CACNA1A-213ENST00000593267 KANK1Q14678 1352 aa16.87■□□□□ 0.29
CACNA1A-213ENST00000593267 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
CACNA1A-213ENST00000593267 PKD2Q13563 968 aa16.85■□□□□ 0.29
CACNA1A-213ENST00000593267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1A-213ENST00000593267 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
CACNA1A-213ENST00000593267 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
CACNA1A-213ENST00000593267 ABCC3O15438 1527 aa16.83■□□□□ 0.28
CACNA1A-213ENST00000593267 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
CACNA1A-213ENST00000593267 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
CACNA1A-213ENST00000593267 FOXD1Q16676 465 aa16.82■□□□□ 0.28
CACNA1A-213ENST00000593267 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
CACNA1A-213ENST00000593267 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
CACNA1A-213ENST00000593267 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-213ENST00000593267 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
CACNA1A-213ENST00000593267 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
CACNA1A-213ENST00000593267 TRPM2O94759 1503 aa16.77■□□□□ 0.28
CACNA1A-213ENST00000593267 MLECQ14165 292 aa16.77■□□□□ 0.28
CACNA1A-213ENST00000593267 GGT6Q6P531 493 aa16.77■□□□□ 0.28
CACNA1A-213ENST00000593267 HSPA2P54652 639 aa16.76■□□□□ 0.27
CACNA1A-213ENST00000593267 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
CACNA1A-213ENST00000593267 PTPRTO14522 1441 aa16.76■□□□□ 0.27
CACNA1A-213ENST00000593267 ARHGAP31Q2M1Z3 1444 aa16.74■□□□□ 0.27
CACNA1A-213ENST00000593267 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
CACNA1A-213ENST00000593267 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-213ENST00000593267 NPATQ14207 1427 aa16.73■□□□□ 0.27
CACNA1A-213ENST00000593267 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
CACNA1A-213ENST00000593267 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CACNA1A-213ENST00000593267 WASHC2CQ9Y4E1 1318 aa16.71■□□□□ 0.27
CACNA1A-213ENST00000593267 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
CACNA1A-213ENST00000593267 CLTCL1P53675 1640 aa16.71■□□□□ 0.27
CACNA1A-213ENST00000593267 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
CACNA1A-213ENST00000593267 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
CACNA1A-213ENST00000593267 NOS1P29475 1434 aa16.68■□□□□ 0.26
CACNA1A-213ENST00000593267 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
CACNA1A-213ENST00000593267 NEURL4Q96JN8 1562 aa16.68■□□□□ 0.26
CACNA1A-213ENST00000593267 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
CACNA1A-213ENST00000593267 SYNMO15061 1565 aa16.67■□□□□ 0.26
CACNA1A-213ENST00000593267 KIF1BO60333 1816 aa16.65■□□□□ 0.26
CACNA1A-213ENST00000593267 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
CACNA1A-213ENST00000593267 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
CACNA1A-213ENST00000593267 CFAP65Q6ZU64 1925 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-213ENST00000593267 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
CACNA1A-213ENST00000593267 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
CACNA1A-213ENST00000593267 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
CACNA1A-213ENST00000593267 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-213ENST00000593267 CEBPAP49715 358 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-213ENST00000593267 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
CACNA1A-213ENST00000593267 ADGRB3O60242 1522 aa16.6■□□□□ 0.25
CACNA1A-213ENST00000593267 C3P01024 1663 aa16.59■□□□□ 0.25
CACNA1A-213ENST00000593267 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CACNA1A-213ENST00000593267 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.24
CACNA1A-213ENST00000593267 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-213ENST00000593267 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
CACNA1A-213ENST00000593267 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
CACNA1A-213ENST00000593267 ESF1Q9H501 851 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-213ENST00000593267 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
CACNA1A-213ENST00000593267 TMEM131LA2VDJ0 1609 aa16.54■□□□□ 0.24
CACNA1A-213ENST00000593267 PPLO60437 1756 aa16.53■□□□□ 0.24
CACNA1A-213ENST00000593267 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.24
CACNA1A-213ENST00000593267 FBXO31Q5XUX0 539 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-213ENST00000593267 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
CACNA1A-213ENST00000593267 KDM5AP29375 1690 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-213ENST00000593267 MYOM2P54296 1465 aa16.51■□□□□ 0.23
CACNA1A-213ENST00000593267 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
CACNA1A-213ENST00000593267 PRAG1Q86YV5 1406 aa16.5■□□□□ 0.23
CACNA1A-213ENST00000593267 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
CACNA1A-213ENST00000593267 NBPF8Q3BBV2 869 aa16.49■□□□□ 0.23
CACNA1A-213ENST00000593267 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
CACNA1A-213ENST00000593267 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms