RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 FBXO31Q5XUX0 539 aaPredicted RBP27.89■■■□□ 2.06
RETREG3-212ENST00000593251 ARHGEF5Q12774 1597 aa27.89■■■□□ 2.05
RETREG3-212ENST00000593251 POLR1AO95602 1720 aaPredicted RBP27.89■■■□□ 2.05
RETREG3-212ENST00000593251 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
RETREG3-212ENST00000593251 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
RETREG3-212ENST00000593251 TNRQ92752 1358 aa27.86■■■□□ 2.05
RETREG3-212ENST00000593251 PZPP20742 1482 aa27.85■■■□□ 2.05
RETREG3-212ENST00000593251 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
RETREG3-212ENST00000593251 LRRC9Q6ZRR7 1453 aa27.83■■■□□ 2.05
RETREG3-212ENST00000593251 FAM135AQ9P2D6 1515 aa27.83■■■□□ 2.05
RETREG3-212ENST00000593251 LOC105371045A0A1W2PR82 267 aa27.83■■■□□ 2.05
RETREG3-212ENST00000593251 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
RETREG3-212ENST00000593251 VPS8Q8N3P4 1428 aa27.83■■■□□ 2.05
RETREG3-212ENST00000593251 NEURL4Q96JN8 1562 aa27.82■■■□□ 2.04
RETREG3-212ENST00000593251 UBAP1LF5GYI3 381 aa27.81■■■□□ 2.04
RETREG3-212ENST00000593251 TSPY4P0CV99 314 aa27.81■■■□□ 2.04
RETREG3-212ENST00000593251 TSPY10P0CW01 314 aa27.81■■■□□ 2.04
RETREG3-212ENST00000593251 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
RETREG3-212ENST00000593251 RNF17Q9BXT8 1623 aaKnown RBP27.76■■■□□ 2.03
RETREG3-212ENST00000593251 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
RETREG3-212ENST00000593251 MIA2Q96PC5 1412 aa27.74■■■□□ 2.03
RETREG3-212ENST00000593251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.73■■■□□ 2.03
RETREG3-212ENST00000593251 CFAP65Q6ZU64 1925 aaKnown RBP27.73■■■□□ 2.03
RETREG3-212ENST00000593251 UGGT1Q9NYU2 1555 aa27.72■■■□□ 2.03
RETREG3-212ENST00000593251 ZC3H13Q5T200 1668 aaKnown RBP27.72■■■□□ 2.03
RETREG3-212ENST00000593251 CEP152O94986 1710 aa27.71■■■□□ 2.03
RETREG3-212ENST00000593251 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.03
RETREG3-212ENST00000593251 NLRP1Q9C000 1473 aa27.7■■■□□ 2.03
RETREG3-212ENST00000593251 ABCC3O15438 1527 aa27.7■■■□□ 2.02
RETREG3-212ENST00000593251 MYOM3Q5VTT5 1437 aa27.68■■■□□ 2.02
RETREG3-212ENST00000593251 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
RETREG3-212ENST00000593251 MROH1Q8NDA8 1641 aa27.68■■■□□ 2.02
RETREG3-212ENST00000593251 ANKLE2Q86XL3 938 aa27.67■■■□□ 2.02
RETREG3-212ENST00000593251 THEMISQ8N1K5 641 aaPredicted RBP27.67■■■□□ 2.02
RETREG3-212ENST00000593251 SHANK2Q9UPX8 1470 aa27.67■■■□□ 2.02
RETREG3-212ENST00000593251 CPS1P31327 1500 aa27.66■■■□□ 2.02
RETREG3-212ENST00000593251 DEPDC5O75140 1603 aa27.65■■■□□ 2.02
RETREG3-212ENST00000593251 VWDEQ8N2E2 1590 aa27.65■■■□□ 2.02
RETREG3-212ENST00000593251 SOCS7O14512 581 aa27.64■■■□□ 2.02
RETREG3-212ENST00000593251 IQGAP1P46940 1657 aa27.62■■■□□ 2.01
RETREG3-212ENST00000593251 NPHP4O75161 1426 aaPredicted RBP27.62■■■□□ 2.01
RETREG3-212ENST00000593251 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
RETREG3-212ENST00000593251 ERVK-7P63135 1459 aa27.61■■■□□ 2.01
RETREG3-212ENST00000593251 CROCC2H7BZ55 1655 aa27.61■■■□□ 2.01
RETREG3-212ENST00000593251 MED14O60244 1454 aa27.6■■■□□ 2.01
RETREG3-212ENST00000593251 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
RETREG3-212ENST00000593251 PIP4K2BP78356 416 aa27.59■■■□□ 2.01
RETREG3-212ENST00000593251 STRCP1A6NGW2 1772 aa27.58■■■□□ 2
RETREG3-212ENST00000593251 UBR1Q8IWV7 1749 aa27.57■■■□□ 2
RETREG3-212ENST00000593251 PTPN23Q9H3S7 1636 aa27.56■■■□□ 2
RETREG3-212ENST00000593251 TOM1O60784 492 aa27.54■■■□□ 2
RETREG3-212ENST00000593251 HSPA1LP34931 641 aa27.53■■■□□ 2
RETREG3-212ENST00000593251 ABCC5O15440 1437 aa27.51■■□□□ 1.99
RETREG3-212ENST00000593251 KIF15Q9NS87 1388 aa27.51■■□□□ 1.99
RETREG3-212ENST00000593251 PRDM15P57071 1507 aaPredicted RBP27.51■■□□□ 1.99
RETREG3-212ENST00000593251 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
RETREG3-212ENST00000593251 ALKQ9UM73 1620 aa27.49■■□□□ 1.99
RETREG3-212ENST00000593251 ERBINQ96RT1 1412 aa27.46■■□□□ 1.99
RETREG3-212ENST00000593251 MED1Q15648 1581 aaPredicted RBP27.45■■□□□ 1.99
RETREG3-212ENST00000593251 DAPK1P53355 1430 aa27.45■■□□□ 1.98
RETREG3-212ENST00000593251 APLP2Q06481 763 aa27.45■■□□□ 1.98
RETREG3-212ENST00000593251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.45■■□□□ 1.98
RETREG3-212ENST00000593251 LRRC7Q96NW7 1537 aa27.44■■□□□ 1.98
RETREG3-212ENST00000593251 SYNMO15061 1565 aa27.43■■□□□ 1.98
RETREG3-212ENST00000593251 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
RETREG3-212ENST00000593251 SCAF11Q99590 1463 aaKnown RBP27.43■■□□□ 1.98
RETREG3-212ENST00000593251 ARHGAP31Q2M1Z3 1444 aa27.42■■□□□ 1.98
RETREG3-212ENST00000593251 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
RETREG3-212ENST00000593251 CHIC2Q9UKJ5 165 aa27.4■■□□□ 1.98
RETREG3-212ENST00000593251 SLIT1O75093 1534 aa27.4■■□□□ 1.98
RETREG3-212ENST00000593251 ARHGAP23Q9P227 1491 aa27.39■■□□□ 1.98
RETREG3-212ENST00000593251 LTKP29376 864 aa27.39■■□□□ 1.98
RETREG3-212ENST00000593251 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
RETREG3-212ENST00000593251 TXNDC2Q86VQ3 553 aa27.37■■□□□ 1.97
RETREG3-212ENST00000593251 XIRP1Q702N8 1843 aaKnown RBP27.37■■□□□ 1.97
RETREG3-212ENST00000593251 KANK1Q14678 1352 aa27.35■■□□□ 1.97
RETREG3-212ENST00000593251 ANKRD30AQ9BXX3 1397 aa27.33■■□□□ 1.97
RETREG3-212ENST00000593251 EID1Q9Y6B2 187 aa27.3■■□□□ 1.96
RETREG3-212ENST00000593251 LMTK2Q8IWU2 1503 aa27.3■■□□□ 1.96
RETREG3-212ENST00000593251 STAG3Q9UJ98 1225 aa27.29■■□□□ 1.96
RETREG3-212ENST00000593251 KDM5AP29375 1690 aaKnown RBP27.29■■□□□ 1.96
RETREG3-212ENST00000593251 EFCAB6Q5THR3 1501 aa27.28■■□□□ 1.96
RETREG3-212ENST00000593251 TMEM2Q9UHN6 1383 aa27.28■■□□□ 1.96
RETREG3-212ENST00000593251 IDI1Q13907 227 aa27.26■■□□□ 1.95
RETREG3-212ENST00000593251 ADGRL2O95490 1459 aa27.22■■□□□ 1.95
RETREG3-212ENST00000593251 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
RETREG3-212ENST00000593251 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
RETREG3-212ENST00000593251 MYO5BQ9ULV0 1848 aa27.2■■□□□ 1.95
RETREG3-212ENST00000593251 NOS1P29475 1434 aa27.2■■□□□ 1.94
RETREG3-212ENST00000593251 ADGRB3O60242 1522 aa27.2■■□□□ 1.94
RETREG3-212ENST00000593251 TET3O43151 1660 aa27.17■■□□□ 1.94
RETREG3-212ENST00000593251 SLC26A8Q96RN1 970 aa27.17■■□□□ 1.94
RETREG3-212ENST00000593251 ANKRD50Q9ULJ7 1429 aa27.14■■□□□ 1.93
RETREG3-212ENST00000593251 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.93
RETREG3-212ENST00000593251 TMEM94Q12767 1356 aa27.13■■□□□ 1.93
RETREG3-212ENST00000593251 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
RETREG3-212ENST00000593251 KCNA6P17658 529 aa27.11■■□□□ 1.93
RETREG3-212ENST00000593251 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
RETREG3-212ENST00000593251 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
RETREG3-212ENST00000593251 PROSER2Q86WR7 435 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms