RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PKD2Q13563 968 aa18.01■□□□□ 0.47
PRKCSH-220ENST00000593104 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
PRKCSH-220ENST00000593104 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
PRKCSH-220ENST00000593104 TNRQ92752 1358 aa17.99■□□□□ 0.47
PRKCSH-220ENST00000593104 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
PRKCSH-220ENST00000593104 SOCS7O14512 581 aa17.98■□□□□ 0.47
PRKCSH-220ENST00000593104 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
PRKCSH-220ENST00000593104 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-220ENST00000593104 PZPP20742 1482 aa17.95■□□□□ 0.46
PRKCSH-220ENST00000593104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKCSH-220ENST00000593104 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
PRKCSH-220ENST00000593104 WASHC2CQ9Y4E1 1318 aa17.95■□□□□ 0.46
PRKCSH-220ENST00000593104 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-220ENST00000593104 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
PRKCSH-220ENST00000593104 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
PRKCSH-220ENST00000593104 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-220ENST00000593104 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
PRKCSH-220ENST00000593104 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
PRKCSH-220ENST00000593104 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
PRKCSH-220ENST00000593104 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-220ENST00000593104 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
PRKCSH-220ENST00000593104 HSPA1LP34931 641 aa17.88■□□□□ 0.45
PRKCSH-220ENST00000593104 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 ABCC3O15438 1527 aa17.87■□□□□ 0.45
PRKCSH-220ENST00000593104 CEP152O94986 1710 aa17.86■□□□□ 0.45
PRKCSH-220ENST00000593104 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
PRKCSH-220ENST00000593104 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-220ENST00000593104 STRCP1A6NGW2 1772 aa17.85■□□□□ 0.45
PRKCSH-220ENST00000593104 NPHP4O75161 1426 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-220ENST00000593104 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
PRKCSH-220ENST00000593104 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
PRKCSH-220ENST00000593104 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
PRKCSH-220ENST00000593104 CPS1P31327 1500 aa17.84■□□□□ 0.45
PRKCSH-220ENST00000593104 FAM135AQ9P2D6 1515 aa17.84■□□□□ 0.45
PRKCSH-220ENST00000593104 NLRP1Q9C000 1473 aa17.84■□□□□ 0.45
PRKCSH-220ENST00000593104 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
PRKCSH-220ENST00000593104 IQGAP1P46940 1657 aa17.83■□□□□ 0.44
PRKCSH-220ENST00000593104 THEMISQ8N1K5 641 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-220ENST00000593104 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-220ENST00000593104 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
PRKCSH-220ENST00000593104 DEPDC5O75140 1603 aa17.8■□□□□ 0.44
PRKCSH-220ENST00000593104 MED14O60244 1454 aa17.8■□□□□ 0.44
PRKCSH-220ENST00000593104 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-220ENST00000593104 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
PRKCSH-220ENST00000593104 TOM1O60784 492 aa17.79■□□□□ 0.44
PRKCSH-220ENST00000593104 EIF2AK4Q9P2K8 1649 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-220ENST00000593104 UBR1Q8IWV7 1749 aa17.77■□□□□ 0.44
PRKCSH-220ENST00000593104 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
PRKCSH-220ENST00000593104 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
PRKCSH-220ENST00000593104 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
PRKCSH-220ENST00000593104 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
PRKCSH-220ENST00000593104 LTKP29376 864 aa17.73■□□□□ 0.43
PRKCSH-220ENST00000593104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.439e-11■□□□□ 8.5
PRKCSH-220ENST00000593104 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
PRKCSH-220ENST00000593104 ABCC5O15440 1437 aa17.72■□□□□ 0.43
PRKCSH-220ENST00000593104 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
PRKCSH-220ENST00000593104 MAP3K1Q13233 1512 aa17.71■□□□□ 0.43
PRKCSH-220ENST00000593104 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-220ENST00000593104 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-220ENST00000593104 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
PRKCSH-220ENST00000593104 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
PRKCSH-220ENST00000593104 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
PRKCSH-220ENST00000593104 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-220ENST00000593104 SYNMO15061 1565 aa17.68■□□□□ 0.42
PRKCSH-220ENST00000593104 DAPK1P53355 1430 aa17.67■□□□□ 0.42
PRKCSH-220ENST00000593104 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
PRKCSH-220ENST00000593104 SLIT1O75093 1534 aa17.66■□□□□ 0.42
PRKCSH-220ENST00000593104 ERBINQ96RT1 1412 aa17.65■□□□□ 0.42
PRKCSH-220ENST00000593104 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-220ENST00000593104 RBM33Q96EV2 1170 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-220ENST00000593104 ARHGAP31Q2M1Z3 1444 aa17.64■□□□□ 0.41
PRKCSH-220ENST00000593104 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
PRKCSH-220ENST00000593104 IDI1Q13907 227 aa17.6■□□□□ 0.41
PRKCSH-220ENST00000593104 STAG3Q9UJ98 1225 aa17.6■□□□□ 0.41
PRKCSH-220ENST00000593104 TMEM2Q9UHN6 1383 aa17.6■□□□□ 0.41
PRKCSH-220ENST00000593104 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
PRKCSH-220ENST00000593104 EFCAB6Q5THR3 1501 aa17.58■□□□□ 0.41
PRKCSH-220ENST00000593104 APLP2Q06481 763 aa17.58■□□□□ 0.4
PRKCSH-220ENST00000593104 EID1Q9Y6B2 187 aa17.58■□□□□ 0.4
PRKCSH-220ENST00000593104 KANK1Q14678 1352 aa17.57■□□□□ 0.4
PRKCSH-220ENST00000593104 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-220ENST00000593104 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
PRKCSH-220ENST00000593104 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
PRKCSH-220ENST00000593104 LMTK2Q8IWU2 1503 aa17.55■□□□□ 0.4
PRKCSH-220ENST00000593104 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
PRKCSH-220ENST00000593104 TET3O43151 1660 aa17.53■□□□□ 0.4
PRKCSH-220ENST00000593104 NOS1P29475 1434 aa17.53■□□□□ 0.4
PRKCSH-220ENST00000593104 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
PRKCSH-220ENST00000593104 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-220ENST00000593104 ROBO1Q9Y6N7 1651 aa17.51■□□□□ 0.39
PRKCSH-220ENST00000593104 KCNA6P17658 529 aa17.5■□□□□ 0.39
PRKCSH-220ENST00000593104 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-220ENST00000593104 BCANQ96GW7 911 aa17.5■□□□□ 0.39
PRKCSH-220ENST00000593104 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-220ENST00000593104 ADGRL2O95490 1459 aa17.48■□□□□ 0.39
PRKCSH-220ENST00000593104 GCC2Q8IWJ2 1684 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms