RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 IQSEC2Q5JU85 1478 aa25.27■■□□□ 1.64
CIRBP-241ENST00000593048 ZNF142P52746 1687 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-241ENST00000593048 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
CIRBP-241ENST00000593048 MYO3AQ8NEV4 1616 aa25.23■■□□□ 1.63
CIRBP-241ENST00000593048 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
CIRBP-241ENST00000593048 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
CIRBP-241ENST00000593048 CEP170BQ9Y4F5 1589 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-241ENST00000593048 PKD2Q13563 968 aa25.2■■□□□ 1.62
CIRBP-241ENST00000593048 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
CIRBP-241ENST00000593048 MAST1Q9Y2H9 1570 aa25.19■■□□□ 1.62
CIRBP-241ENST00000593048 FAM135AQ9P2D6 1515 aa25.18■■□□□ 1.62
CIRBP-241ENST00000593048 PLA2R1Q13018 1463 aa25.18■■□□□ 1.62
CIRBP-241ENST00000593048 TNRQ92752 1358 aa25.18■■□□□ 1.62
CIRBP-241ENST00000593048 ILDR2Q71H61 639 aa25.17■■□□□ 1.62
CIRBP-241ENST00000593048 PZPP20742 1482 aa25.16■■□□□ 1.62
CIRBP-241ENST00000593048 A2ML1A8K2U0 1454 aa25.15■■□□□ 1.62
CIRBP-241ENST00000593048 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
CIRBP-241ENST00000593048 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.62
CIRBP-241ENST00000593048 RRP7BPQ9NSQ0 103 aa25.12■■□□□ 1.61
CIRBP-241ENST00000593048 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
CIRBP-241ENST00000593048 ABCC5O15440 1437 aa25.1■■□□□ 1.61
CIRBP-241ENST00000593048 FGD6Q6ZV73 1430 aa25.1■■□□□ 1.61
CIRBP-241ENST00000593048 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CIRBP-241ENST00000593048 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
CIRBP-241ENST00000593048 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-241ENST00000593048 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.61
CIRBP-241ENST00000593048 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.6
CIRBP-241ENST00000593048 THEMISQ8N1K5 641 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-241ENST00000593048 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
CIRBP-241ENST00000593048 DAPK1P53355 1430 aa25.06■■□□□ 1.6
CIRBP-241ENST00000593048 CHIC2Q9UKJ5 165 aa25.06■■□□□ 1.6
CIRBP-241ENST00000593048 SHANK2Q9UPX8 1470 aa25.06■■□□□ 1.6
CIRBP-241ENST00000593048 ABCC3O15438 1527 aa25.06■■□□□ 1.6
CIRBP-241ENST00000593048 SOCS7O14512 581 aa25.05■■□□□ 1.6
CIRBP-241ENST00000593048 NLRP1Q9C000 1473 aa25.04■■□□□ 1.6
CIRBP-241ENST00000593048 ANKLE2Q86XL3 938 aa25.03■■□□□ 1.6
CIRBP-241ENST00000593048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.6
CIRBP-241ENST00000593048 FAM50AQ14320 339 aaKnown RBP25.02■■□□□ 1.6
CIRBP-241ENST00000593048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.02■■□□□ 1.65e-6■■■□□ 18.7
CIRBP-241ENST00000593048 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
CIRBP-241ENST00000593048 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
CIRBP-241ENST00000593048 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
CIRBP-241ENST00000593048 UGGT1Q9NYU2 1555 aa25■■□□□ 1.59
CIRBP-241ENST00000593048 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
CIRBP-241ENST00000593048 POLR1AO95602 1720 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-241ENST00000593048 MROH1Q8NDA8 1641 aa24.97■■□□□ 1.59
CIRBP-241ENST00000593048 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
CIRBP-241ENST00000593048 KANK1Q14678 1352 aa24.97■■□□□ 1.59
CIRBP-241ENST00000593048 ERVK-7P63135 1459 aa24.96■■□□□ 1.59
CIRBP-241ENST00000593048 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
CIRBP-241ENST00000593048 CEP152O94986 1710 aa24.94■■□□□ 1.58
CIRBP-241ENST00000593048 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
CIRBP-241ENST00000593048 ARHGAP31Q2M1Z3 1444 aa24.89■■□□□ 1.58
CIRBP-241ENST00000593048 NPHP4O75161 1426 aaPredicted RBP24.88■■□□□ 1.57
CIRBP-241ENST00000593048 CPS1P31327 1500 aa24.87■■□□□ 1.57
CIRBP-241ENST00000593048 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CIRBP-241ENST00000593048 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
CIRBP-241ENST00000593048 VWDEQ8N2E2 1590 aa24.84■■□□□ 1.57
CIRBP-241ENST00000593048 MED14O60244 1454 aa24.83■■□□□ 1.57
CIRBP-241ENST00000593048 ADGRL2O95490 1459 aa24.83■■□□□ 1.57
CIRBP-241ENST00000593048 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
CIRBP-241ENST00000593048 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
CIRBP-241ENST00000593048 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
CIRBP-241ENST00000593048 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
CIRBP-241ENST00000593048 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
CIRBP-241ENST00000593048 LMTK2Q8IWU2 1503 aa24.78■■□□□ 1.56
CIRBP-241ENST00000593048 UBR1Q8IWV7 1749 aa24.78■■□□□ 1.56
CIRBP-241ENST00000593048 TOM1O60784 492 aa24.77■■□□□ 1.56
CIRBP-241ENST00000593048 IQGAP1P46940 1657 aa24.77■■□□□ 1.56
CIRBP-241ENST00000593048 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
CIRBP-241ENST00000593048 ALKQ9UM73 1620 aa24.76■■□□□ 1.55
CIRBP-241ENST00000593048 LTKP29376 864 aa24.76■■□□□ 1.55
CIRBP-241ENST00000593048 IDI1Q13907 227 aa24.76■■□□□ 1.55
CIRBP-241ENST00000593048 SCAF11Q99590 1463 aaKnown RBP24.76■■□□□ 1.55
CIRBP-241ENST00000593048 HSPA1LP34931 641 aa24.74■■□□□ 1.55
CIRBP-241ENST00000593048 ITGAEP38570 1179 aa24.74■■□□□ 1.55
CIRBP-241ENST00000593048 MED1Q15648 1581 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-241ENST00000593048 PIP4K2BP78356 416 aa24.73■■□□□ 1.55
CIRBP-241ENST00000593048 STRCP1A6NGW2 1772 aa24.72■■□□□ 1.55
CIRBP-241ENST00000593048 SLIT1O75093 1534 aa24.71■■□□□ 1.55
CIRBP-241ENST00000593048 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
CIRBP-241ENST00000593048 PIK3C2BO00750 1634 aa24.71■■□□□ 1.55
CIRBP-241ENST00000593048 TMEM2Q9UHN6 1383 aa24.7■■□□□ 1.55
CIRBP-241ENST00000593048 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
CIRBP-241ENST00000593048 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
CIRBP-241ENST00000593048 NOS1P29475 1434 aa24.68■■□□□ 1.54
CIRBP-241ENST00000593048 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
CIRBP-241ENST00000593048 SYNMO15061 1565 aa24.65■■□□□ 1.54
CIRBP-241ENST00000593048 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.54
CIRBP-241ENST00000593048 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
CIRBP-241ENST00000593048 BCANQ96GW7 911 aa24.62■■□□□ 1.53
CIRBP-241ENST00000593048 KDM5AP29375 1690 aaKnown RBP24.6■■□□□ 1.53
CIRBP-241ENST00000593048 TET3O43151 1660 aa24.59■■□□□ 1.53
CIRBP-241ENST00000593048 ADGRB3O60242 1522 aa24.58■■□□□ 1.53
CIRBP-241ENST00000593048 CHGAP10645 457 aaKnown RBP24.58■■□□□ 1.53
CIRBP-241ENST00000593048 HDGFP51858 240 aaKnown RBP24.58■■□□□ 1.53
CIRBP-241ENST00000593048 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
CIRBP-241ENST00000593048 NUP155O75694 1391 aa24.57■■□□□ 1.52
CIRBP-241ENST00000593048 UNC13BO14795 1591 aa24.57■■□□□ 1.52
CIRBP-241ENST00000593048 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms