RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
RANBP3-230ENST00000593025 MED14O60244 1454 aa17.81■□□□□ 0.44
RANBP3-230ENST00000593025 PZPP20742 1482 aa17.81■□□□□ 0.44
RANBP3-230ENST00000593025 MBD5Q9P267 1494 aa17.81■□□□□ 0.44
RANBP3-230ENST00000593025 TNRQ92752 1358 aa17.8■□□□□ 0.44
RANBP3-230ENST00000593025 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
RANBP3-230ENST00000593025 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
RANBP3-230ENST00000593025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
RANBP3-230ENST00000593025 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.44
RANBP3-230ENST00000593025 IQGAP1P46940 1657 aa17.77■□□□□ 0.44
RANBP3-230ENST00000593025 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
RANBP3-230ENST00000593025 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
RANBP3-230ENST00000593025 NPHP4O75161 1426 aaPredicted RBP17.77■□□□□ 0.44
RANBP3-230ENST00000593025 TIAM1Q13009 1591 aa17.77■□□□□ 0.44
RANBP3-230ENST00000593025 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.43
RANBP3-230ENST00000593025 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
RANBP3-230ENST00000593025 CFDP1Q9UEE9 299 aaPredicted RBP17.76■□□□□ 0.43
RANBP3-230ENST00000593025 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
RANBP3-230ENST00000593025 SYNMO15061 1565 aa17.75■□□□□ 0.43
RANBP3-230ENST00000593025 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
RANBP3-230ENST00000593025 CCNB3Q8WWL7 1395 aa17.74■□□□□ 0.43
RANBP3-230ENST00000593025 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
RANBP3-230ENST00000593025 ZC3H13Q5T200 1668 aaKnown RBP17.74■□□□□ 0.43
RANBP3-230ENST00000593025 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
RANBP3-230ENST00000593025 NLRP1Q9C000 1473 aa17.72■□□□□ 0.43
RANBP3-230ENST00000593025 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
RANBP3-230ENST00000593025 ANKLE2Q86XL3 938 aa17.71■□□□□ 0.43
RANBP3-230ENST00000593025 XIRP1Q702N8 1843 aaKnown RBP17.7■□□□□ 0.42
RANBP3-230ENST00000593025 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-230ENST00000593025 KIF3BO15066 747 aa17.67■□□□□ 0.42
RANBP3-230ENST00000593025 THEMISQ8N1K5 641 aaPredicted RBP17.66■□□□□ 0.42
RANBP3-230ENST00000593025 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
RANBP3-230ENST00000593025 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
RANBP3-230ENST00000593025 UBR1Q8IWV7 1749 aa17.63■□□□□ 0.41
RANBP3-230ENST00000593025 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
RANBP3-230ENST00000593025 ABCC3O15438 1527 aa17.62■□□□□ 0.41
RANBP3-230ENST00000593025 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
RANBP3-230ENST00000593025 CAMSAP2Q08AD1 1489 aa17.61■□□□□ 0.41
RANBP3-230ENST00000593025 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
RANBP3-230ENST00000593025 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
RANBP3-230ENST00000593025 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
RANBP3-230ENST00000593025 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
RANBP3-230ENST00000593025 NCOA2Q15596 1464 aa17.6■□□□□ 0.41
RANBP3-230ENST00000593025 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
RANBP3-230ENST00000593025 ARHGAP23Q9P227 1491 aa17.57■□□□□ 0.4
RANBP3-230ENST00000593025 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
RANBP3-230ENST00000593025 ARHGEF5Q12774 1597 aa17.57■□□□□ 0.4
RANBP3-230ENST00000593025 SCAF11Q99590 1463 aaKnown RBP17.56■□□□□ 0.4
RANBP3-230ENST00000593025 SLIT1O75093 1534 aa17.56■□□□□ 0.4
RANBP3-230ENST00000593025 CEP152O94986 1710 aa17.55■□□□□ 0.4
RANBP3-230ENST00000593025 FAM135BQ49AJ0 1406 aa17.54■□□□□ 0.4
RANBP3-230ENST00000593025 LTKP29376 864 aa17.53■□□□□ 0.4
RANBP3-230ENST00000593025 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
RANBP3-230ENST00000593025 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
RANBP3-230ENST00000593025 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
RANBP3-230ENST00000593025 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
RANBP3-230ENST00000593025 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
RANBP3-230ENST00000593025 PIK3C2BO00750 1634 aa17.47■□□□□ 0.39
RANBP3-230ENST00000593025 RSPH4AQ5TD94 716 aa17.46■□□□□ 0.39
RANBP3-230ENST00000593025 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
RANBP3-230ENST00000593025 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
RANBP3-230ENST00000593025 TET3O43151 1660 aa17.43■□□□□ 0.38
RANBP3-230ENST00000593025 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
RANBP3-230ENST00000593025 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
RANBP3-230ENST00000593025 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
RANBP3-230ENST00000593025 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
RANBP3-230ENST00000593025 KDM5AP29375 1690 aaKnown RBP17.4■□□□□ 0.38
RANBP3-230ENST00000593025 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
RANBP3-230ENST00000593025 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
RANBP3-230ENST00000593025 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
RANBP3-230ENST00000593025 LRP6O75581 1613 aa17.39■□□□□ 0.37
RANBP3-230ENST00000593025 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.37
RANBP3-230ENST00000593025 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
RANBP3-230ENST00000593025 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
RANBP3-230ENST00000593025 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
RANBP3-230ENST00000593025 KCNA6P17658 529 aa17.36■□□□□ 0.37
RANBP3-230ENST00000593025 NKTRP30414 1462 aaKnown RBP17.36■□□□□ 0.37
RANBP3-230ENST00000593025 EFCAB6Q5THR3 1501 aa17.36■□□□□ 0.37
RANBP3-230ENST00000593025 SRCAPQ6ZRS2 3230 aa17.35■□□□□ 0.37
RANBP3-230ENST00000593025 JCADQ9P266 1359 aa17.33■□□□□ 0.36
RANBP3-230ENST00000593025 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
RANBP3-230ENST00000593025 EID1Q9Y6B2 187 aa17.33■□□□□ 0.36
RANBP3-230ENST00000593025 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
RANBP3-230ENST00000593025 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
RANBP3-230ENST00000593025 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
RANBP3-230ENST00000593025 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
RANBP3-230ENST00000593025 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
RANBP3-230ENST00000593025 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
RANBP3-230ENST00000593025 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
RANBP3-230ENST00000593025 IDI1Q13907 227 aa17.28■□□□□ 0.36
RANBP3-230ENST00000593025 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
RANBP3-230ENST00000593025 SHPRHQ149N8 1683 aa17.28■□□□□ 0.36
RANBP3-230ENST00000593025 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
RANBP3-230ENST00000593025 MSH6P52701 1360 aa17.27■□□□□ 0.35
RANBP3-230ENST00000593025 NOS1P29475 1434 aa17.26■□□□□ 0.35
RANBP3-230ENST00000593025 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
RANBP3-230ENST00000593025 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
RANBP3-230ENST00000593025 FGD6Q6ZV73 1430 aa17.25■□□□□ 0.35
RANBP3-230ENST00000593025 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
RANBP3-230ENST00000593025 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms