RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 DCAF11Q8TEB1 546 aa22.82■■□□□ 1.24
PRKCSH-217ENST00000592741 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
PRKCSH-217ENST00000592741 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
PRKCSH-217ENST00000592741 MRS2Q9HD23 443 aa22.81■■□□□ 1.24
PRKCSH-217ENST00000592741 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
PRKCSH-217ENST00000592741 ROCK2O75116 1388 aaKnown RBP22.79■■□□□ 1.24
PRKCSH-217ENST00000592741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.247e-8■■□□□ 11.8
PRKCSH-217ENST00000592741 DHX29Q7Z478 1369 aaKnown RBP22.78■■□□□ 1.24
PRKCSH-217ENST00000592741 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
PRKCSH-217ENST00000592741 BCANQ96GW7 911 aa22.78■■□□□ 1.24
PRKCSH-217ENST00000592741 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
PRKCSH-217ENST00000592741 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
PRKCSH-217ENST00000592741 TRPM1Q7Z4N2 1603 aa22.75■■□□□ 1.23
PRKCSH-217ENST00000592741 PRAG1Q86YV5 1406 aa22.75■■□□□ 1.23
PRKCSH-217ENST00000592741 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
PRKCSH-217ENST00000592741 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
PRKCSH-217ENST00000592741 ATP10AO60312 1499 aa22.72■■□□□ 1.23
PRKCSH-217ENST00000592741 A2MP01023 1474 aa22.71■■□□□ 1.23
PRKCSH-217ENST00000592741 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.23
PRKCSH-217ENST00000592741 WDR7Q9Y4E6 1490 aa22.7■■□□□ 1.22
PRKCSH-217ENST00000592741 RTEL1-TNFRSF6BF6WH68 1400 aa22.7■■□□□ 1.22
PRKCSH-217ENST00000592741 SPAG9O60271 1321 aaKnown RBP22.68■■□□□ 1.22
PRKCSH-217ENST00000592741 LAMC1P11047 1609 aa22.68■■□□□ 1.22
PRKCSH-217ENST00000592741 ZFYVE16Q7Z3T8 1539 aa22.67■■□□□ 1.22
PRKCSH-217ENST00000592741 RGL3Q3MIN7 710 aa22.67■■□□□ 1.22
PRKCSH-217ENST00000592741 ZBED9Q6R2W3 1325 aa22.67■■□□□ 1.22
PRKCSH-217ENST00000592741 EIF2AK4Q9P2K8 1649 aaKnown RBP22.67■■□□□ 1.22
PRKCSH-217ENST00000592741 GPRASP1Q5JY77 1395 aa22.66■■□□□ 1.22
PRKCSH-217ENST00000592741 E9PCH4 1651 aa22.64■■□□□ 1.22
PRKCSH-217ENST00000592741 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.22
PRKCSH-217ENST00000592741 TSHZ2Q9NRE2 1034 aa22.62■■□□□ 1.21
PRKCSH-217ENST00000592741 PRDM15P57071 1507 aaPredicted RBP22.61■■□□□ 1.21
PRKCSH-217ENST00000592741 FANCAO15360 1455 aa22.61■■□□□ 1.21
PRKCSH-217ENST00000592741 AFAP1Q8N556 730 aa22.6■■□□□ 1.21
PRKCSH-217ENST00000592741 DEPDC5O75140 1603 aa22.59■■□□□ 1.21
PRKCSH-217ENST00000592741 INO80Q9ULG1 1556 aaPredicted RBP22.59■■□□□ 1.21
PRKCSH-217ENST00000592741 KTN1Q86UP2 1357 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-217ENST00000592741 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.21
PRKCSH-217ENST00000592741 ATP7AQ04656 1500 aa22.58■■□□□ 1.21
PRKCSH-217ENST00000592741 NBPF1Q3BBV0 1214 aa22.57■■□□□ 1.2
PRKCSH-217ENST00000592741 TRPM2O94759 1503 aa22.56■■□□□ 1.2
PRKCSH-217ENST00000592741 RNF17Q9BXT8 1623 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 TET3O43151 1660 aa22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 RALBP1Q15311 655 aa22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
PRKCSH-217ENST00000592741 ASXL2Q76L83 1435 aa22.53■■□□□ 1.2
PRKCSH-217ENST00000592741 ERICH6BQ5W0A0 696 aa22.52■■□□□ 1.2
PRKCSH-217ENST00000592741 CEP152O94986 1710 aa22.52■■□□□ 1.2
PRKCSH-217ENST00000592741 KANK1Q14678 1352 aa22.52■■□□□ 1.19
PRKCSH-217ENST00000592741 TMC1Q8TDI8 760 aa22.51■■□□□ 1.19
PRKCSH-217ENST00000592741 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
PRKCSH-217ENST00000592741 PTPRTO14522 1441 aa22.5■■□□□ 1.19
PRKCSH-217ENST00000592741 SCAPERQ9BY12 1400 aa22.5■■□□□ 1.19
PRKCSH-217ENST00000592741 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
PRKCSH-217ENST00000592741 VWDEQ8N2E2 1590 aa22.49■■□□□ 1.19
PRKCSH-217ENST00000592741 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
PRKCSH-217ENST00000592741 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
PRKCSH-217ENST00000592741 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
PRKCSH-217ENST00000592741 TESK2Q96S53 571 aa22.47■■□□□ 1.19
PRKCSH-217ENST00000592741 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
PRKCSH-217ENST00000592741 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
PRKCSH-217ENST00000592741 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
PRKCSH-217ENST00000592741 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.19
PRKCSH-217ENST00000592741 STAC3Q96MF2 364 aa22.45■■□□□ 1.18
PRKCSH-217ENST00000592741 TMF1P82094 1093 aa22.44■■□□□ 1.18
PRKCSH-217ENST00000592741 KIF3BO15066 747 aa22.43■■□□□ 1.18
PRKCSH-217ENST00000592741 LRPPRCP42704 1394 aaKnown RBP22.43■■□□□ 1.18
PRKCSH-217ENST00000592741 PARD3Q8TEW0 1356 aa22.43■■□□□ 1.18
PRKCSH-217ENST00000592741 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
PRKCSH-217ENST00000592741 MROH1Q8NDA8 1641 aa22.41■■□□□ 1.18
PRKCSH-217ENST00000592741 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.18
PRKCSH-217ENST00000592741 WASHC2CQ9Y4E1 1318 aa22.4■■□□□ 1.18
PRKCSH-217ENST00000592741 NEURL4Q96JN8 1562 aa22.4■■□□□ 1.18
PRKCSH-217ENST00000592741 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 NLRP13Q86W25 1043 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 OSCARQ8IYS5 282 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 PPP4R2Q9NY27 417 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 CFAP74Q9C0B2 1584 aa22.39■■□□□ 1.18
PRKCSH-217ENST00000592741 ZNF518AQ6AHZ1 1483 aa22.39■■□□□ 1.17
PRKCSH-217ENST00000592741 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
PRKCSH-217ENST00000592741 SCAF11Q99590 1463 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-217ENST00000592741 EFCAB6Q5THR3 1501 aa22.35■■□□□ 1.17
PRKCSH-217ENST00000592741 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
PRKCSH-217ENST00000592741 PANK3Q9H999 370 aa22.34■■□□□ 1.17
PRKCSH-217ENST00000592741 LMTK2Q8IWU2 1503 aa22.32■■□□□ 1.16
PRKCSH-217ENST00000592741 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
PRKCSH-217ENST00000592741 KIF1BO60333 1816 aa22.31■■□□□ 1.16
PRKCSH-217ENST00000592741 PPRC1Q5VV67 1664 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-217ENST00000592741 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
PRKCSH-217ENST00000592741 EIF3AQ14152 1382 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-217ENST00000592741 MYOM2P54296 1465 aa22.3■■□□□ 1.16
PRKCSH-217ENST00000592741 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
PRKCSH-217ENST00000592741 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
PRKCSH-217ENST00000592741 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
PRKCSH-217ENST00000592741 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
PRKCSH-217ENST00000592741 SYNMO15061 1565 aa22.27■■□□□ 1.15
PRKCSH-217ENST00000592741 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms