RNA–Protein interactions for RNA: ENST00000592423.1

RDH13-220, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 2,811 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-220ENST00000592423 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
RDH13-220ENST00000592423 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
RDH13-220ENST00000592423 NUP155O75694 1391 aa16.74■□□□□ 0.27
RDH13-220ENST00000592423 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
RDH13-220ENST00000592423 CAMSAP2Q08AD1 1489 aa16.74■□□□□ 0.27
RDH13-220ENST00000592423 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
RDH13-220ENST00000592423 NLRP13Q86W25 1043 aa16.73■□□□□ 0.27
RDH13-220ENST00000592423 MS4A1P11836 297 aa16.72■□□□□ 0.27
RDH13-220ENST00000592423 NUP160Q12769 1436 aa16.72■□□□□ 0.27
RDH13-220ENST00000592423 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
RDH13-220ENST00000592423 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
RDH13-220ENST00000592423 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
RDH13-220ENST00000592423 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.26
RDH13-220ENST00000592423 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
RDH13-220ENST00000592423 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
RDH13-220ENST00000592423 NBPF1Q3BBV0 1214 aa16.69■□□□□ 0.26
RDH13-220ENST00000592423 ANKRD50Q9ULJ7 1429 aa16.69■□□□□ 0.26
RDH13-220ENST00000592423 NFKBIBQ15653 356 aa16.69■□□□□ 0.26
RDH13-220ENST00000592423 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
RDH13-220ENST00000592423 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
RDH13-220ENST00000592423 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
RDH13-220ENST00000592423 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
RDH13-220ENST00000592423 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
RDH13-220ENST00000592423 UHRF1BP1Q6BDS2 1440 aa16.66■□□□□ 0.26
RDH13-220ENST00000592423 GSE1Q14687 1217 aa16.65■□□□□ 0.26
RDH13-220ENST00000592423 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
RDH13-220ENST00000592423 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
RDH13-220ENST00000592423 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
RDH13-220ENST00000592423 DISP1Q96F81 1524 aa16.64■□□□□ 0.25
RDH13-220ENST00000592423 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
RDH13-220ENST00000592423 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
RDH13-220ENST00000592423 RGS3P49796 1198 aa16.63■□□□□ 0.25
RDH13-220ENST00000592423 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
RDH13-220ENST00000592423 PANK3Q9H999 370 aa16.62■□□□□ 0.25
RDH13-220ENST00000592423 PLB1Q6P1J6 1458 aa16.62■□□□□ 0.25
RDH13-220ENST00000592423 RAPGEF6Q8TEU7 1601 aa16.62■□□□□ 0.25
RDH13-220ENST00000592423 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
RDH13-220ENST00000592423 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
RDH13-220ENST00000592423 KIAA0556O60303 1618 aa16.61■□□□□ 0.25
RDH13-220ENST00000592423 HNRNPMP52272 730 aaKnown RBP eCLIP16.6■□□□□ 0.25
RDH13-220ENST00000592423 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
RDH13-220ENST00000592423 E9PCH4 1651 aa16.6■□□□□ 0.25
RDH13-220ENST00000592423 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
RDH13-220ENST00000592423 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
RDH13-220ENST00000592423 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
RDH13-220ENST00000592423 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
RDH13-220ENST00000592423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
RDH13-220ENST00000592423 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
RDH13-220ENST00000592423 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
RDH13-220ENST00000592423 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
RDH13-220ENST00000592423 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
RDH13-220ENST00000592423 FBLN2P98095 1184 aa16.56■□□□□ 0.24
RDH13-220ENST00000592423 C9orf84Q5VXU9 1444 aa16.56■□□□□ 0.24
RDH13-220ENST00000592423 C8orf34Q49A92 452 aa16.56■□□□□ 0.24
RDH13-220ENST00000592423 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
RDH13-220ENST00000592423 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
RDH13-220ENST00000592423 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
RDH13-220ENST00000592423 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
RDH13-220ENST00000592423 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
RDH13-220ENST00000592423 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
RDH13-220ENST00000592423 TESK2Q96S53 571 aa16.53■□□□□ 0.24
RDH13-220ENST00000592423 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.24
RDH13-220ENST00000592423 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
RDH13-220ENST00000592423 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.23
RDH13-220ENST00000592423 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
RDH13-220ENST00000592423 CCDC146Q8IYE0 955 aa16.51■□□□□ 0.23
RDH13-220ENST00000592423 PRAG1Q86YV5 1406 aa16.51■□□□□ 0.23
RDH13-220ENST00000592423 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
RDH13-220ENST00000592423 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
RDH13-220ENST00000592423 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
RDH13-220ENST00000592423 KDM5DQ9BY66 1539 aa16.49■□□□□ 0.23
RDH13-220ENST00000592423 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
RDH13-220ENST00000592423 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
RDH13-220ENST00000592423 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
RDH13-220ENST00000592423 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
RDH13-220ENST00000592423 BCAR3O75815 825 aa16.46■□□□□ 0.23
RDH13-220ENST00000592423 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
RDH13-220ENST00000592423 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
RDH13-220ENST00000592423 TMF1P82094 1093 aa16.46■□□□□ 0.23
RDH13-220ENST00000592423 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
RDH13-220ENST00000592423 ERBINQ96RT1 1412 aa16.46■□□□□ 0.22
RDH13-220ENST00000592423 PPP2R1AP30153 589 aa16.46■□□□□ 0.22
RDH13-220ENST00000592423 ARXQ96QS3 562 aa16.45■□□□□ 0.22
RDH13-220ENST00000592423 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
RDH13-220ENST00000592423 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
RDH13-220ENST00000592423 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
RDH13-220ENST00000592423 SEC24BO95487 1268 aa16.43■□□□□ 0.22
RDH13-220ENST00000592423 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
RDH13-220ENST00000592423 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
RDH13-220ENST00000592423 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
RDH13-220ENST00000592423 A2MP01023 1474 aa16.43■□□□□ 0.22
RDH13-220ENST00000592423 POGKQ9P215 609 aa16.43■□□□□ 0.22
RDH13-220ENST00000592423 IGHDP01880 384 aa16.42■□□□□ 0.22
RDH13-220ENST00000592423 PTPRGP23470 1445 aa16.41■□□□□ 0.22
RDH13-220ENST00000592423 APAF1O14727 1248 aa16.41■□□□□ 0.22
RDH13-220ENST00000592423 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
RDH13-220ENST00000592423 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
RDH13-220ENST00000592423 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
RDH13-220ENST00000592423 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
RDH13-220ENST00000592423 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms