RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 A2MP01023 1474 aa12.29□□□□□ -0.44
VAT1-209ENST00000592388 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.44
VAT1-209ENST00000592388 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
VAT1-209ENST00000592388 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
VAT1-209ENST00000592388 SYNMO15061 1565 aa12.26□□□□□ -0.45
VAT1-209ENST00000592388 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
VAT1-209ENST00000592388 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
VAT1-209ENST00000592388 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
VAT1-209ENST00000592388 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
VAT1-209ENST00000592388 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
VAT1-209ENST00000592388 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
VAT1-209ENST00000592388 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
VAT1-209ENST00000592388 FMN1Q68DA7 1419 aa12.24□□□□□ -0.45
VAT1-209ENST00000592388 SYCP2Q9BX26 1530 aa12.24□□□□□ -0.45
VAT1-209ENST00000592388 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
VAT1-209ENST00000592388 ZNF772Q68DY9 489 aaPredicted RBP12.22□□□□□ -0.45
VAT1-209ENST00000592388 MEX3CQ5U5Q3 659 aaKnown RBP12.21□□□□□ -0.45
VAT1-209ENST00000592388 PZPP20742 1482 aa12.21□□□□□ -0.46
VAT1-209ENST00000592388 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
VAT1-209ENST00000592388 RXRBP28702 533 aa12.2□□□□□ -0.46
VAT1-209ENST00000592388 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
VAT1-209ENST00000592388 ROBO1Q9Y6N7 1651 aa12.19□□□□□ -0.46
VAT1-209ENST00000592388 JCADQ9P266 1359 aa12.19□□□□□ -0.46
VAT1-209ENST00000592388 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
VAT1-209ENST00000592388 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
VAT1-209ENST00000592388 INO80Q9ULG1 1556 aaPredicted RBP12.18□□□□□ -0.46
VAT1-209ENST00000592388 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
VAT1-209ENST00000592388 KIF3BO15066 747 aa12.18□□□□□ -0.46
VAT1-209ENST00000592388 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
VAT1-209ENST00000592388 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
VAT1-209ENST00000592388 ZC3H13Q5T200 1668 aaKnown RBP12.16□□□□□ -0.46
VAT1-209ENST00000592388 LRP6O75581 1613 aa12.15□□□□□ -0.46
VAT1-209ENST00000592388 LTKP29376 864 aa12.15□□□□□ -0.46
VAT1-209ENST00000592388 KIAA1107Q9UPP5 1409 aa12.14□□□□□ -0.47
VAT1-209ENST00000592388 ADGBQ8N7X0 1667 aa12.14□□□□□ -0.47
VAT1-209ENST00000592388 TXNDC2Q86VQ3 553 aa12.14□□□□□ -0.47
VAT1-209ENST00000592388 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
VAT1-209ENST00000592388 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
VAT1-209ENST00000592388 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
VAT1-209ENST00000592388 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
VAT1-209ENST00000592388 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
VAT1-209ENST00000592388 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
VAT1-209ENST00000592388 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
VAT1-209ENST00000592388 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
VAT1-209ENST00000592388 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
VAT1-209ENST00000592388 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
VAT1-209ENST00000592388 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
VAT1-209ENST00000592388 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
VAT1-209ENST00000592388 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
VAT1-209ENST00000592388 PLEKHH2Q8IVE3 1493 aa12.1□□□□□ -0.47
VAT1-209ENST00000592388 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
VAT1-209ENST00000592388 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
VAT1-209ENST00000592388 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
VAT1-209ENST00000592388 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
VAT1-209ENST00000592388 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
VAT1-209ENST00000592388 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
VAT1-209ENST00000592388 KCNA6P17658 529 aa12.08□□□□□ -0.48
VAT1-209ENST00000592388 FOXD1Q16676 465 aa12.07□□□□□ -0.48
VAT1-209ENST00000592388 EID1Q9Y6B2 187 aa12.07□□□□□ -0.48
VAT1-209ENST00000592388 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
VAT1-209ENST00000592388 AFF2P51816 1311 aa12.07□□□□□ -0.48
VAT1-209ENST00000592388 MSH6P52701 1360 aa12.06□□□□□ -0.48
VAT1-209ENST00000592388 RGS12O14924 1447 aa12.06□□□□□ -0.48
VAT1-209ENST00000592388 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
VAT1-209ENST00000592388 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
VAT1-209ENST00000592388 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
VAT1-209ENST00000592388 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
VAT1-209ENST00000592388 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
VAT1-209ENST00000592388 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
VAT1-209ENST00000592388 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
VAT1-209ENST00000592388 UBR1Q8IWV7 1749 aa12.04□□□□□ -0.48
VAT1-209ENST00000592388 SLC26A8Q96RN1 970 aa12.04□□□□□ -0.48
VAT1-209ENST00000592388 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
VAT1-209ENST00000592388 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
VAT1-209ENST00000592388 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
VAT1-209ENST00000592388 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
VAT1-209ENST00000592388 MBD5Q9P267 1494 aa12.02□□□□□ -0.48
VAT1-209ENST00000592388 SLIT1O75093 1534 aa12.02□□□□□ -0.48
VAT1-209ENST00000592388 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
VAT1-209ENST00000592388 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
VAT1-209ENST00000592388 CFAP65Q6ZU64 1925 aaKnown RBP12□□□□□ -0.49
VAT1-209ENST00000592388 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
VAT1-209ENST00000592388 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
VAT1-209ENST00000592388 ABCC3O15438 1527 aa11.99□□□□□ -0.49
VAT1-209ENST00000592388 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
VAT1-209ENST00000592388 TMEM2Q9UHN6 1383 aa11.98□□□□□ -0.49
VAT1-209ENST00000592388 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
VAT1-209ENST00000592388 BCANQ96GW7 911 aa11.97□□□□□ -0.49
VAT1-209ENST00000592388 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
VAT1-209ENST00000592388 C14orf37Q86TY3 774 aa11.96□□□□□ -0.49
VAT1-209ENST00000592388 NGLY1Q96IV0 654 aa11.96□□□□□ -0.49
VAT1-209ENST00000592388 CCDC141Q6ZP82 1450 aa11.94□□□□□ -0.5
VAT1-209ENST00000592388 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
VAT1-209ENST00000592388 EHBP1L1Q8N3D4 1523 aa11.93□□□□□ -0.5
VAT1-209ENST00000592388 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
VAT1-209ENST00000592388 TET3O43151 1660 aa11.92□□□□□ -0.5
VAT1-209ENST00000592388 KDM5AP29375 1690 aaKnown RBP11.92□□□□□ -0.5
VAT1-209ENST00000592388 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
VAT1-209ENST00000592388 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
VAT1-209ENST00000592388 ATF3P18847 181 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms