RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
SMARCA4-218ENST00000592158 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
SMARCA4-218ENST00000592158 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
SMARCA4-218ENST00000592158 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
SMARCA4-218ENST00000592158 THEMISQ8N1K5 641 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-218ENST00000592158 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
SMARCA4-218ENST00000592158 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.08
SMARCA4-218ENST00000592158 EP400Q96L91 3159 aa15.57■□□□□ 0.08
SMARCA4-218ENST00000592158 TNRQ92752 1358 aa15.57■□□□□ 0.08
SMARCA4-218ENST00000592158 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-218ENST00000592158 AFF2P51816 1311 aa15.56■□□□□ 0.08
SMARCA4-218ENST00000592158 SAMD9Q5K651 1589 aa15.55■□□□□ 0.08
SMARCA4-218ENST00000592158 GGT6Q6P531 493 aa15.55■□□□□ 0.08
SMARCA4-218ENST00000592158 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-218ENST00000592158 KDM5DQ9BY66 1539 aa15.54■□□□□ 0.08
SMARCA4-218ENST00000592158 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
SMARCA4-218ENST00000592158 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
SMARCA4-218ENST00000592158 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-218ENST00000592158 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-218ENST00000592158 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
SMARCA4-218ENST00000592158 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
SMARCA4-218ENST00000592158 QTRT2Q9H974 415 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-218ENST00000592158 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
SMARCA4-218ENST00000592158 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
SMARCA4-218ENST00000592158 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-218ENST00000592158 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
SMARCA4-218ENST00000592158 ATP7AQ04656 1500 aa15.46■□□□□ 0.07
SMARCA4-218ENST00000592158 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
SMARCA4-218ENST00000592158 NHSL1Q5SYE7 1610 aa15.45■□□□□ 0.06
SMARCA4-218ENST00000592158 NLRP1Q9C000 1473 aa15.45■□□□□ 0.06
SMARCA4-218ENST00000592158 KIF14Q15058 1648 aa15.44■□□□□ 0.06
SMARCA4-218ENST00000592158 NGLY1Q96IV0 654 aa15.44■□□□□ 0.06
SMARCA4-218ENST00000592158 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
SMARCA4-218ENST00000592158 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
SMARCA4-218ENST00000592158 PLXNC1O60486 1568 aa15.42■□□□□ 0.06
SMARCA4-218ENST00000592158 HRCP23327 699 aa15.41■□□□□ 0.06
SMARCA4-218ENST00000592158 MIA2Q96PC5 1412 aa15.41■□□□□ 0.06
SMARCA4-218ENST00000592158 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
SMARCA4-218ENST00000592158 A2MP01023 1474 aa15.4■□□□□ 0.06
SMARCA4-218ENST00000592158 PZPP20742 1482 aa15.4■□□□□ 0.06
SMARCA4-218ENST00000592158 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-218ENST00000592158 PROSER2Q86WR7 435 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-218ENST00000592158 SAMD9LQ8IVG5 1584 aa15.39■□□□□ 0.05
SMARCA4-218ENST00000592158 C8orf37Q96NL8 207 aa15.38■□□□□ 0.05
SMARCA4-218ENST00000592158 DEFB132Q7Z7B7 95 aa15.37■□□□□ 0.05
SMARCA4-218ENST00000592158 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-218ENST00000592158 CEP350Q5VT06 3117 aa15.37■□□□□ 0.05
SMARCA4-218ENST00000592158 MSH6P52701 1360 aa15.36■□□□□ 0.05
SMARCA4-218ENST00000592158 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
SMARCA4-218ENST00000592158 SCAF11Q99590 1463 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-218ENST00000592158 C1QTNF8P60827 252 aa15.35■□□□□ 0.05
SMARCA4-218ENST00000592158 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-218ENST00000592158 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
SMARCA4-218ENST00000592158 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-218ENST00000592158 LTKP29376 864 aa15.32■□□□□ 0.04
SMARCA4-218ENST00000592158 KCNA6P17658 529 aa15.31■□□□□ 0.04
SMARCA4-218ENST00000592158 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-218ENST00000592158 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-218ENST00000592158 BCL9LQ86UU0 1499 aa15.31■□□□□ 0.04
SMARCA4-218ENST00000592158 PRDM15P57071 1507 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-218ENST00000592158 DIP2AQ14689 1571 aa15.3■□□□□ 0.04
SMARCA4-218ENST00000592158 PREX2Q70Z35 1606 aa15.3■□□□□ 0.04
SMARCA4-218ENST00000592158 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
SMARCA4-218ENST00000592158 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-218ENST00000592158 TROQ12816 1431 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-218ENST00000592158 ABCC3O15438 1527 aa15.27■□□□□ 0.03
SMARCA4-218ENST00000592158 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-218ENST00000592158 TRPC5Q9UL62 973 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-218ENST00000592158 ATP1B4Q9UN42 357 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-218ENST00000592158 CLIP1P30622 1438 aa15.25■□□□□ 0.03
SMARCA4-218ENST00000592158 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-218ENST00000592158 KDM5AP29375 1690 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-218ENST00000592158 ADGBQ8N7X0 1667 aa15.24■□□□□ 0.03
SMARCA4-218ENST00000592158 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
SMARCA4-218ENST00000592158 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
SMARCA4-218ENST00000592158 NCOA2Q15596 1464 aa15.23■□□□□ 0.03
SMARCA4-218ENST00000592158 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
SMARCA4-218ENST00000592158 SYCP2Q9BX26 1530 aa15.22■□□□□ 0.03
SMARCA4-218ENST00000592158 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMARCA4-218ENST00000592158 CHIC1Q5VXU3 224 aa15.22■□□□□ 0.03
SMARCA4-218ENST00000592158 USP21Q9UK80 565 aa15.22■□□□□ 0.03
SMARCA4-218ENST00000592158 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 SLC34A2O95436 690 aa15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 ZNF777Q9ULD5 760 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 EID1Q9Y6B2 187 aa15.21■□□□□ 0.03
SMARCA4-218ENST00000592158 SLIT1O75093 1534 aa15.2■□□□□ 0.02
SMARCA4-218ENST00000592158 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
SMARCA4-218ENST00000592158 KIF3BO15066 747 aa15.17■□□□□ 0.02
SMARCA4-218ENST00000592158 SLC26A8Q96RN1 970 aa15.17■□□□□ 0.02
SMARCA4-218ENST00000592158 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
SMARCA4-218ENST00000592158 ATRNO75882 1429 aa15.17■□□□□ 0.02
SMARCA4-218ENST00000592158 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
SMARCA4-218ENST00000592158 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-218ENST00000592158 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
SMARCA4-218ENST00000592158 LRRC59Q96AG4 307 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-218ENST00000592158 MAST1Q9Y2H9 1570 aa15.13■□□□□ 0.01
SMARCA4-218ENST00000592158 DHX29Q7Z478 1369 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-218ENST00000592158 PNPLA6Q8IY17 1366 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms