RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
GFAP-221ENST00000592065 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
GFAP-221ENST00000592065 CLTCQ00610 1675 aaKnown RBP19.68■□□□□ 0.74
GFAP-221ENST00000592065 DNMT1P26358 1616 aaKnown RBP19.68■□□□□ 0.74
GFAP-221ENST00000592065 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
GFAP-221ENST00000592065 C3P01024 1663 aa19.68■□□□□ 0.74
GFAP-221ENST00000592065 LMTK3Q96Q04 1460 aa19.66■□□□□ 0.74
GFAP-221ENST00000592065 PTPRKQ15262 1439 aa19.66■□□□□ 0.74
GFAP-221ENST00000592065 KIF15Q9NS87 1388 aa19.65■□□□□ 0.74
GFAP-221ENST00000592065 MAST1Q9Y2H9 1570 aa19.63■□□□□ 0.73
GFAP-221ENST00000592065 ZMYM3Q14202 1370 aa19.62■□□□□ 0.73
GFAP-221ENST00000592065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
GFAP-221ENST00000592065 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
GFAP-221ENST00000592065 WASHC2CQ9Y4E1 1318 aa19.59■□□□□ 0.73
GFAP-221ENST00000592065 SHANK2Q9UPX8 1470 aa19.58■□□□□ 0.73
GFAP-221ENST00000592065 NCOA1Q15788 1441 aa19.56■□□□□ 0.72
GFAP-221ENST00000592065 MROH1Q8NDA8 1641 aa19.55■□□□□ 0.72
GFAP-221ENST00000592065 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
GFAP-221ENST00000592065 DUOX2Q9NRD8 1548 aa19.55■□□□□ 0.72
GFAP-221ENST00000592065 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
GFAP-221ENST00000592065 MIER1Q8N108 512 aa19.54■□□□□ 0.72
GFAP-221ENST00000592065 ANKRD30AQ9BXX3 1397 aa19.54■□□□□ 0.72
GFAP-221ENST00000592065 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
GFAP-221ENST00000592065 CEP152O94986 1710 aa19.52■□□□□ 0.72
GFAP-221ENST00000592065 PREX1Q8TCU6 1659 aa19.52■□□□□ 0.72
GFAP-221ENST00000592065 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.71
GFAP-221ENST00000592065 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
GFAP-221ENST00000592065 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
GFAP-221ENST00000592065 RNF17Q9BXT8 1623 aaKnown RBP19.5■□□□□ 0.71
GFAP-221ENST00000592065 ABCC3O15438 1527 aa19.49■□□□□ 0.71
GFAP-221ENST00000592065 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
GFAP-221ENST00000592065 ERBINQ96RT1 1412 aa19.48■□□□□ 0.71
GFAP-221ENST00000592065 EIF2AK4Q9P2K8 1649 aaKnown RBP19.48■□□□□ 0.71
GFAP-221ENST00000592065 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
GFAP-221ENST00000592065 SETD1BQ9UPS6 1966 aaKnown RBP19.47■□□□□ 0.71
GFAP-221ENST00000592065 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
GFAP-221ENST00000592065 ANKRD50Q9ULJ7 1429 aa19.46■□□□□ 0.71
GFAP-221ENST00000592065 MYO3AQ8NEV4 1616 aa19.45■□□□□ 0.7
GFAP-221ENST00000592065 YTHDC1Q96MU7 727 aaKnown RBP19.44■□□□□ 0.7
GFAP-221ENST00000592065 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
GFAP-221ENST00000592065 PZPP20742 1482 aa19.42■□□□□ 0.7
GFAP-221ENST00000592065 CAMSAP1Q5T5Y3 1602 aa19.42■□□□□ 0.7
GFAP-221ENST00000592065 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
GFAP-221ENST00000592065 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
GFAP-221ENST00000592065 NPATQ14207 1427 aa19.4■□□□□ 0.7
GFAP-221ENST00000592065 TNRQ92752 1358 aa19.4■□□□□ 0.7
GFAP-221ENST00000592065 STRCQ7RTU9 1775 aa19.4■□□□□ 0.7
GFAP-221ENST00000592065 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
GFAP-221ENST00000592065 NCKAP5LQ9HCH0 1330 aa19.38■□□□□ 0.69
GFAP-221ENST00000592065 ZC3H13Q5T200 1668 aaKnown RBP19.36■□□□□ 0.69
GFAP-221ENST00000592065 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
GFAP-221ENST00000592065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
GFAP-221ENST00000592065 ERVK-7P63135 1459 aa19.35■□□□□ 0.69
GFAP-221ENST00000592065 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
GFAP-221ENST00000592065 KANK1Q14678 1352 aa19.34■□□□□ 0.69
GFAP-221ENST00000592065 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
GFAP-221ENST00000592065 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
GFAP-221ENST00000592065 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
GFAP-221ENST00000592065 NAIPQ13075 1403 aa19.31■□□□□ 0.68
GFAP-221ENST00000592065 NUP155O75694 1391 aa19.31■□□□□ 0.68
GFAP-221ENST00000592065 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
GFAP-221ENST00000592065 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
GFAP-221ENST00000592065 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
GFAP-221ENST00000592065 UNC13BO14795 1591 aa19.28■□□□□ 0.68
GFAP-221ENST00000592065 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
GFAP-221ENST00000592065 SYNMO15061 1565 aa19.26■□□□□ 0.67
GFAP-221ENST00000592065 IDI1Q13907 227 aa19.25■□□□□ 0.67
GFAP-221ENST00000592065 LMTK2Q8IWU2 1503 aa19.25■□□□□ 0.67
GFAP-221ENST00000592065 ARHGAP31Q2M1Z3 1444 aa19.24■□□□□ 0.67
GFAP-221ENST00000592065 E9PCH4 1651 aa19.24■□□□□ 0.67
GFAP-221ENST00000592065 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
GFAP-221ENST00000592065 TRIM52Q96A61 297 aa19.23■□□□□ 0.67
GFAP-221ENST00000592065 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
GFAP-221ENST00000592065 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
GFAP-221ENST00000592065 TET3O43151 1660 aa19.22■□□□□ 0.67
GFAP-221ENST00000592065 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
GFAP-221ENST00000592065 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
GFAP-221ENST00000592065 FOXD1Q16676 465 aa19.21■□□□□ 0.67
GFAP-221ENST00000592065 UBR1Q8IWV7 1749 aa19.21■□□□□ 0.67
GFAP-221ENST00000592065 IQGAP3Q86VI3 1631 aa19.21■□□□□ 0.67
GFAP-221ENST00000592065 STAG3Q9UJ98 1225 aa19.2■□□□□ 0.66
GFAP-221ENST00000592065 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
GFAP-221ENST00000592065 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
GFAP-221ENST00000592065 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
GFAP-221ENST00000592065 LTKP29376 864 aa19.19■□□□□ 0.66
GFAP-221ENST00000592065 THEMISQ8N1K5 641 aaPredicted RBP19.19■□□□□ 0.66
GFAP-221ENST00000592065 NOS1P29475 1434 aa19.19■□□□□ 0.66
GFAP-221ENST00000592065 ILDR1Q86SU0 546 aaPredicted RBP19.18■□□□□ 0.66
GFAP-221ENST00000592065 PLA2R1Q13018 1463 aa19.18■□□□□ 0.66
GFAP-221ENST00000592065 POLR1AO95602 1720 aaPredicted RBP19.16■□□□□ 0.66
GFAP-221ENST00000592065 MYO5BQ9ULV0 1848 aa19.16■□□□□ 0.66
GFAP-221ENST00000592065 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
GFAP-221ENST00000592065 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
GFAP-221ENST00000592065 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
GFAP-221ENST00000592065 PKD2Q13563 968 aa19.13■□□□□ 0.65
GFAP-221ENST00000592065 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
GFAP-221ENST00000592065 PTPRTO14522 1441 aa19.12■□□□□ 0.65
GFAP-221ENST00000592065 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
GFAP-221ENST00000592065 RPRD2Q5VT52 1461 aaKnown RBP19.11■□□□□ 0.65
GFAP-221ENST00000592065 CERKQ8TCT0 537 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms