RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
BRCA1-227ENST00000591849 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
BRCA1-227ENST00000591849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■□□ 18.6
BRCA1-227ENST00000591849 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
BRCA1-227ENST00000591849 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.05
BRCA1-227ENST00000591849 SHANK2Q9UPX8 1470 aa15.33■□□□□ 0.04
BRCA1-227ENST00000591849 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
BRCA1-227ENST00000591849 DUOX2Q9NRD8 1548 aa15.3■□□□□ 0.04
BRCA1-227ENST00000591849 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
BRCA1-227ENST00000591849 ZNF142P52746 1687 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-227ENST00000591849 KANK1Q14678 1352 aa15.28■□□□□ 0.04
BRCA1-227ENST00000591849 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
BRCA1-227ENST00000591849 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
BRCA1-227ENST00000591849 NPATQ14207 1427 aa15.26■□□□□ 0.03
BRCA1-227ENST00000591849 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
BRCA1-227ENST00000591849 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-227ENST00000591849 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
BRCA1-227ENST00000591849 PTPRTO14522 1441 aa15.25■□□□□ 0.03
BRCA1-227ENST00000591849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
BRCA1-227ENST00000591849 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
BRCA1-227ENST00000591849 KDM5DQ9BY66 1539 aa15.23■□□□□ 0.03
BRCA1-227ENST00000591849 CROCC2H7BZ55 1655 aa15.23■□□□□ 0.03
BRCA1-227ENST00000591849 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
BRCA1-227ENST00000591849 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
BRCA1-227ENST00000591849 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
BRCA1-227ENST00000591849 FAM135AQ9P2D6 1515 aa15.21■□□□□ 0.03
BRCA1-227ENST00000591849 ROCK1Q13464 1354 aa15.21■□□□□ 0.02
BRCA1-227ENST00000591849 TNRQ92752 1358 aa15.21■□□□□ 0.02
BRCA1-227ENST00000591849 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
BRCA1-227ENST00000591849 EIF2AK4Q9P2K8 1649 aaKnown RBP15.2■□□□□ 0.02
BRCA1-227ENST00000591849 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
BRCA1-227ENST00000591849 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
BRCA1-227ENST00000591849 LTBP4Q8N2S1 1624 aa15.18■□□□□ 0.02
BRCA1-227ENST00000591849 PZPP20742 1482 aa15.18■□□□□ 0.02
BRCA1-227ENST00000591849 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-227ENST00000591849 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
BRCA1-227ENST00000591849 ABCC3O15438 1527 aa15.17■□□□□ 0.02
BRCA1-227ENST00000591849 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
BRCA1-227ENST00000591849 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
BRCA1-227ENST00000591849 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-227ENST00000591849 POLR1AO95602 1720 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-227ENST00000591849 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
BRCA1-227ENST00000591849 NUP155O75694 1391 aa15.12■□□□□ 0.01
BRCA1-227ENST00000591849 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
BRCA1-227ENST00000591849 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-227ENST00000591849 MROH1Q8NDA8 1641 aa15.11■□□□□ 0.01
BRCA1-227ENST00000591849 PKD2Q13563 968 aa15.11■□□□□ 0.01
BRCA1-227ENST00000591849 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
BRCA1-227ENST00000591849 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
BRCA1-227ENST00000591849 ARHGAP31Q2M1Z3 1444 aa15.1■□□□□ 0.01
BRCA1-227ENST00000591849 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
BRCA1-227ENST00000591849 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
BRCA1-227ENST00000591849 NLRP1Q9C000 1473 aa15.09■□□□□ 0.01
BRCA1-227ENST00000591849 CEP152O94986 1710 aa15.08■□□□□ 0
BRCA1-227ENST00000591849 SPATA31D1Q6ZQQ2 1576 aa15.07■□□□□ 0
BRCA1-227ENST00000591849 DEPDC5O75140 1603 aa15.06■□□□□ 0
BRCA1-227ENST00000591849 LMTK2Q8IWU2 1503 aa15.06■□□□□ 0
BRCA1-227ENST00000591849 CHGAP10645 457 aaKnown RBP15.05■□□□□ -0
BRCA1-227ENST00000591849 IDI1Q13907 227 aa15.05■□□□□ -0
BRCA1-227ENST00000591849 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
BRCA1-227ENST00000591849 UGGT1Q9NYU2 1555 aa15.04■□□□□ -0
BRCA1-227ENST00000591849 NAIPQ13075 1403 aa15.04■□□□□ -0
BRCA1-227ENST00000591849 EID1Q9Y6B2 187 aa15.04■□□□□ -0
BRCA1-227ENST00000591849 VWDEQ8N2E2 1590 aa15.03■□□□□ -0
BRCA1-227ENST00000591849 NEURL4Q96JN8 1562 aa15.02■□□□□ -0
BRCA1-227ENST00000591849 HFM1A2PYH4 1435 aa15.02■□□□□ -0
BRCA1-227ENST00000591849 CFAP65Q6ZU64 1925 aaKnown RBP15.02■□□□□ -0
BRCA1-227ENST00000591849 TXNDC2Q86VQ3 553 aa15.02■□□□□ -0
BRCA1-227ENST00000591849 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
BRCA1-227ENST00000591849 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
BRCA1-227ENST00000591849 BCANQ96GW7 911 aa15□□□□□ -0.01
BRCA1-227ENST00000591849 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
BRCA1-227ENST00000591849 EFCAB6Q5THR3 1501 aa15□□□□□ -0.01
BRCA1-227ENST00000591849 UNC13BO14795 1591 aa14.99□□□□□ -0.01
BRCA1-227ENST00000591849 ZNF335Q9H4Z2 1342 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-227ENST00000591849 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
BRCA1-227ENST00000591849 NOS1P29475 1434 aa14.99□□□□□ -0.01
BRCA1-227ENST00000591849 CPS1P31327 1500 aa14.97□□□□□ -0.01
BRCA1-227ENST00000591849 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
BRCA1-227ENST00000591849 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-227ENST00000591849 TET3O43151 1660 aa14.97□□□□□ -0.01
BRCA1-227ENST00000591849 NPHP4O75161 1426 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-227ENST00000591849 IQGAP1P46940 1657 aa14.95□□□□□ -0.02
BRCA1-227ENST00000591849 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
BRCA1-227ENST00000591849 LTKP29376 864 aa14.94□□□□□ -0.02
BRCA1-227ENST00000591849 IQGAP3Q86VI3 1631 aa14.94□□□□□ -0.02
BRCA1-227ENST00000591849 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
BRCA1-227ENST00000591849 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
BRCA1-227ENST00000591849 MED14O60244 1454 aa14.93□□□□□ -0.02
BRCA1-227ENST00000591849 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.92□□□□□ -0.02
BRCA1-227ENST00000591849 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-227ENST00000591849 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
BRCA1-227ENST00000591849 GCC2Q8IWJ2 1684 aa14.92□□□□□ -0.02
BRCA1-227ENST00000591849 SYNMO15061 1565 aa14.91□□□□□ -0.02
BRCA1-227ENST00000591849 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
BRCA1-227ENST00000591849 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
BRCA1-227ENST00000591849 UBAP1LF5GYI3 381 aa14.9□□□□□ -0.02
BRCA1-227ENST00000591849 NUTM2DQ5VT03 806 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-227ENST00000591849 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
BRCA1-227ENST00000591849 FOXD1Q16676 465 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms