RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 KIF3BO15066 747 aa24.39■■□□□ 1.49
APOC4-201ENST00000591600 KDM5DQ9BY66 1539 aa24.39■■□□□ 1.49
APOC4-201ENST00000591600 TSPY4P0CV99 314 aa24.38■■□□□ 1.49
APOC4-201ENST00000591600 TSPY10P0CW01 314 aa24.38■■□□□ 1.49
APOC4-201ENST00000591600 DNMT1P26358 1616 aaKnown RBP24.37■■□□□ 1.49
APOC4-201ENST00000591600 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
APOC4-201ENST00000591600 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
APOC4-201ENST00000591600 NCKAP5LQ9HCH0 1330 aa24.36■■□□□ 1.49
APOC4-201ENST00000591600 PZPP20742 1482 aa24.35■■□□□ 1.49
APOC4-201ENST00000591600 MIA2Q96PC5 1412 aa24.33■■□□□ 1.49
APOC4-201ENST00000591600 WASHC2CQ9Y4E1 1318 aa24.33■■□□□ 1.48
APOC4-201ENST00000591600 POLR1AO95602 1720 aaPredicted RBP24.31■■□□□ 1.48
APOC4-201ENST00000591600 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
APOC4-201ENST00000591600 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
APOC4-201ENST00000591600 EIF2AK4Q9P2K8 1649 aaKnown RBP24.3■■□□□ 1.48
APOC4-201ENST00000591600 TNRQ92752 1358 aa24.29■■□□□ 1.48
APOC4-201ENST00000591600 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
APOC4-201ENST00000591600 ZC3H13Q5T200 1668 aaKnown RBP24.29■■□□□ 1.48
APOC4-201ENST00000591600 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
APOC4-201ENST00000591600 ZNF335Q9H4Z2 1342 aaPredicted RBP24.27■■□□□ 1.48
APOC4-201ENST00000591600 NLRP1Q9C000 1473 aa24.24■■□□□ 1.47
APOC4-201ENST00000591600 NEURL4Q96JN8 1562 aa24.22■■□□□ 1.47
APOC4-201ENST00000591600 ABCC3O15438 1527 aa24.21■■□□□ 1.47
APOC4-201ENST00000591600 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
APOC4-201ENST00000591600 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.46
APOC4-201ENST00000591600 CROCC2H7BZ55 1655 aa24.19■■□□□ 1.46
APOC4-201ENST00000591600 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
APOC4-201ENST00000591600 SPATA31D1Q6ZQQ2 1576 aa24.19■■□□□ 1.46
APOC4-201ENST00000591600 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
APOC4-201ENST00000591600 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
APOC4-201ENST00000591600 SHANK2Q9UPX8 1470 aa24.16■■□□□ 1.46
APOC4-201ENST00000591600 CEP152O94986 1710 aa24.15■■□□□ 1.46
APOC4-201ENST00000591600 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
APOC4-201ENST00000591600 ANKLE2Q86XL3 938 aa24.15■■□□□ 1.46
APOC4-201ENST00000591600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.15■■□□□ 1.46
APOC4-201ENST00000591600 MED14O60244 1454 aa24.14■■□□□ 1.46
APOC4-201ENST00000591600 CFAP65Q6ZU64 1925 aaKnown RBP24.14■■□□□ 1.45
APOC4-201ENST00000591600 APLP2Q06481 763 aa24.13■■□□□ 1.45
APOC4-201ENST00000591600 CPS1P31327 1500 aa24.13■■□□□ 1.45
APOC4-201ENST00000591600 ERVK-7P63135 1459 aa24.12■■□□□ 1.45
APOC4-201ENST00000591600 ABCC5O15440 1437 aa24.11■■□□□ 1.45
APOC4-201ENST00000591600 UBAP1LF5GYI3 381 aa24.11■■□□□ 1.45
APOC4-201ENST00000591600 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
APOC4-201ENST00000591600 DISP3Q9P2K9 1392 aa24.1■■□□□ 1.45
APOC4-201ENST00000591600 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
APOC4-201ENST00000591600 KIF15Q9NS87 1388 aa24.08■■□□□ 1.45
APOC4-201ENST00000591600 IQGAP1P46940 1657 aa24.08■■□□□ 1.44
APOC4-201ENST00000591600 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
APOC4-201ENST00000591600 UBR1Q8IWV7 1749 aa24.07■■□□□ 1.44
APOC4-201ENST00000591600 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
APOC4-201ENST00000591600 DAPK1P53355 1430 aa24.07■■□□□ 1.44
APOC4-201ENST00000591600 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
APOC4-201ENST00000591600 FGD6Q6ZV73 1430 aa24.06■■□□□ 1.44
APOC4-201ENST00000591600 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
APOC4-201ENST00000591600 STRCP1A6NGW2 1772 aa23.98■■□□□ 1.43
APOC4-201ENST00000591600 TOM1O60784 492 aa23.98■■□□□ 1.43
APOC4-201ENST00000591600 ILDR2Q71H61 639 aa23.98■■□□□ 1.43
APOC4-201ENST00000591600 ANKRD30AQ9BXX3 1397 aa23.98■■□□□ 1.43
APOC4-201ENST00000591600 SLIT1O75093 1534 aa23.97■■□□□ 1.43
APOC4-201ENST00000591600 KDM5AP29375 1690 aaKnown RBP23.96■■□□□ 1.43
APOC4-201ENST00000591600 LMTK2Q8IWU2 1503 aa23.96■■□□□ 1.43
APOC4-201ENST00000591600 ARHGAP23Q9P227 1491 aa23.96■■□□□ 1.43
APOC4-201ENST00000591600 KANK1Q14678 1352 aa23.95■■□□□ 1.42
APOC4-201ENST00000591600 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
APOC4-201ENST00000591600 PIK3C2BO00750 1634 aa23.93■■□□□ 1.42
APOC4-201ENST00000591600 SYNMO15061 1565 aa23.93■■□□□ 1.42
APOC4-201ENST00000591600 ADGRL2O95490 1459 aa23.93■■□□□ 1.42
APOC4-201ENST00000591600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.92■■□□□ 1.42
APOC4-201ENST00000591600 ALKQ9UM73 1620 aa23.91■■□□□ 1.42
APOC4-201ENST00000591600 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
APOC4-201ENST00000591600 LRRC7Q96NW7 1537 aa23.89■■□□□ 1.42
APOC4-201ENST00000591600 SOCS7O14512 581 aa23.89■■□□□ 1.41
APOC4-201ENST00000591600 LTKP29376 864 aa23.88■■□□□ 1.41
APOC4-201ENST00000591600 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
APOC4-201ENST00000591600 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
APOC4-201ENST00000591600 EFCAB6Q5THR3 1501 aa23.86■■□□□ 1.41
APOC4-201ENST00000591600 HSPA1LP34931 641 aa23.86■■□□□ 1.41
APOC4-201ENST00000591600 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
APOC4-201ENST00000591600 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
APOC4-201ENST00000591600 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
APOC4-201ENST00000591600 NOS1P29475 1434 aa23.84■■□□□ 1.41
APOC4-201ENST00000591600 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
APOC4-201ENST00000591600 IDI1Q13907 227 aa23.82■■□□□ 1.4
APOC4-201ENST00000591600 RPRD2Q5VT52 1461 aaKnown RBP23.81■■□□□ 1.4
APOC4-201ENST00000591600 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
APOC4-201ENST00000591600 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
APOC4-201ENST00000591600 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
APOC4-201ENST00000591600 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
APOC4-201ENST00000591600 TET3O43151 1660 aa23.77■■□□□ 1.4
APOC4-201ENST00000591600 ADGRB3O60242 1522 aa23.77■■□□□ 1.4
APOC4-201ENST00000591600 MED1Q15648 1581 aaPredicted RBP23.76■■□□□ 1.39
APOC4-201ENST00000591600 GCC2Q8IWJ2 1684 aa23.76■■□□□ 1.39
APOC4-201ENST00000591600 UNC13BO14795 1591 aa23.74■■□□□ 1.39
APOC4-201ENST00000591600 MYO5BQ9ULV0 1848 aa23.72■■□□□ 1.39
APOC4-201ENST00000591600 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
APOC4-201ENST00000591600 KCNA6P17658 529 aa23.68■■□□□ 1.38
APOC4-201ENST00000591600 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
APOC4-201ENST00000591600 E9PCH4 1651 aa23.66■■□□□ 1.38
APOC4-201ENST00000591600 NWD1Q149M9 1564 aa23.65■■□□□ 1.38
APOC4-201ENST00000591600 IQGAP3Q86VI3 1631 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms