RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 USP47Q96K76 1375 aa15.94■□□□□ 0.14
SMARCA4-217ENST00000591595 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
SMARCA4-217ENST00000591595 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
SMARCA4-217ENST00000591595 DDRGK1Q96HY6 314 aa15.92■□□□□ 0.14
SMARCA4-217ENST00000591595 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
SMARCA4-217ENST00000591595 WDR62O43379 1518 aa15.91■□□□□ 0.14
SMARCA4-217ENST00000591595 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
SMARCA4-217ENST00000591595 SPATA31E1Q6ZUB1 1445 aa15.9■□□□□ 0.14
SMARCA4-217ENST00000591595 DHX37Q8IY37 1157 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-217ENST00000591595 PDE4AP27815 886 aa15.89■□□□□ 0.13
SMARCA4-217ENST00000591595 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-217ENST00000591595 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-217ENST00000591595 TPM2P07951 284 aa15.88■□□□□ 0.13
SMARCA4-217ENST00000591595 BRD2P25440 801 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-217ENST00000591595 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-217ENST00000591595 L1TD1Q5T7N2 865 aaKnown RBP15.87■□□□□ 0.13
SMARCA4-217ENST00000591595 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-217ENST00000591595 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-217ENST00000591595 SMG6Q86US8 1419 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-217ENST00000591595 NUP155O75694 1391 aa15.85■□□□□ 0.13
SMARCA4-217ENST00000591595 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
SMARCA4-217ENST00000591595 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-217ENST00000591595 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-217ENST00000591595 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
SMARCA4-217ENST00000591595 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 BACH2Q9BYV9 841 aa15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 TCERG1O14776 1098 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
SMARCA4-217ENST00000591595 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-217ENST00000591595 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-217ENST00000591595 PZPP20742 1482 aa15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 SMAP1Q8IYB5 467 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
SMARCA4-217ENST00000591595 SLC4A3P48751 1232 aa15.81■□□□□ 0.12
SMARCA4-217ENST00000591595 ANKRD50Q9ULJ7 1429 aa15.81■□□□□ 0.12
SMARCA4-217ENST00000591595 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-217ENST00000591595 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
SMARCA4-217ENST00000591595 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-217ENST00000591595 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
SMARCA4-217ENST00000591595 DISP1Q96F81 1524 aa15.79■□□□□ 0.12
SMARCA4-217ENST00000591595 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 POGKQ9P215 609 aa15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
SMARCA4-217ENST00000591595 KIAA0556O60303 1618 aa15.77■□□□□ 0.11
SMARCA4-217ENST00000591595 GPATCH8Q9UKJ3 1502 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-217ENST00000591595 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-217ENST00000591595 RAPGEF6Q8TEU7 1601 aa15.75■□□□□ 0.11
SMARCA4-217ENST00000591595 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.115e-6■■□□□ 11.8
SMARCA4-217ENST00000591595 RALBP1Q15311 655 aa15.75■□□□□ 0.11
SMARCA4-217ENST00000591595 ZNF830Q96NB3 372 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-217ENST00000591595 TMEM51Q9NW97 253 aa15.74■□□□□ 0.11
SMARCA4-217ENST00000591595 MS4A1P11836 297 aa15.74■□□□□ 0.11
SMARCA4-217ENST00000591595 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
SMARCA4-217ENST00000591595 EXOC6Q8TAG9 804 aa15.73■□□□□ 0.11
SMARCA4-217ENST00000591595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.112e-8■■■□□ 17.9
SMARCA4-217ENST00000591595 RCAN3Q9UKA8 241 aa15.73■□□□□ 0.11
SMARCA4-217ENST00000591595 MAP7D2Q96T17 732 aa15.73■□□□□ 0.11
SMARCA4-217ENST00000591595 IFT140Q96RY7 1462 aa15.73■□□□□ 0.11
SMARCA4-217ENST00000591595 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
SMARCA4-217ENST00000591595 VGLL3A8MV65 326 aa15.72■□□□□ 0.11
SMARCA4-217ENST00000591595 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
SMARCA4-217ENST00000591595 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-217ENST00000591595 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
SMARCA4-217ENST00000591595 BCORL1Q5H9F3 1711 aa15.71■□□□□ 0.11
SMARCA4-217ENST00000591595 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-217ENST00000591595 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
SMARCA4-217ENST00000591595 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 BRD4O60885 1362 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 TEX2Q8IWB9 1127 aa15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 C9orf84Q5VXU9 1444 aa15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 UTP14CQ5TAP6 766 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-217ENST00000591595 ESPNB1AK53 854 aa15.69■□□□□ 0.1
SMARCA4-217ENST00000591595 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-217ENST00000591595 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
SMARCA4-217ENST00000591595 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
SMARCA4-217ENST00000591595 SECISBP2LQ93073 1101 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-217ENST00000591595 RALGAPBQ86X10 1494 aa15.67■□□□□ 0.1
SMARCA4-217ENST00000591595 KIAA1211Q6ZU35 1233 aa15.67■□□□□ 0.1
SMARCA4-217ENST00000591595 KIF14Q15058 1648 aa15.67■□□□□ 0.1
SMARCA4-217ENST00000591595 DMTNQ08495 405 aa15.67■□□□□ 0.1
SMARCA4-217ENST00000591595 PANK2Q9BZ23 570 aa15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 ADGRL2O95490 1459 aa15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 KDM5CP41229 1560 aa15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 ANP32BQ92688 251 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 NBPF1Q3BBV0 1214 aa15.66■□□□□ 0.1
SMARCA4-217ENST00000591595 GOLGA6L3A6NEY3 463 aa15.65■□□□□ 0.1
SMARCA4-217ENST00000591595 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms