RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 MBD5Q9P267 1494 aa36.46■■■■□ 3.43
LSM7-206ENST00000591515 SCAF1Q9H7N4 1312 aaKnown RBP36.45■■■■□ 3.43
LSM7-206ENST00000591515 SHANK2Q9UPX8 1470 aa36.44■■■■□ 3.42
LSM7-206ENST00000591515 ZNF644Q9H582 1327 aaPredicted RBP36.44■■■■□ 3.42
LSM7-206ENST00000591515 PIP4K2BP78356 416 aa36.43■■■■□ 3.42
LSM7-206ENST00000591515 MTUS2Q5JR59 1369 aa36.41■■■■□ 3.42
LSM7-206ENST00000591515 TNRQ92752 1358 aa36.41■■■■□ 3.42
LSM7-206ENST00000591515 RTEL1-TNFRSF6BF6WH68 1400 aa36.4■■■■□ 3.42
LSM7-206ENST00000591515 VWDEQ8N2E2 1590 aa36.39■■■■□ 3.42
LSM7-206ENST00000591515 DHX29Q7Z478 1369 aaKnown RBP36.39■■■■□ 3.42
LSM7-206ENST00000591515 PZPP20742 1482 aa36.38■■■■□ 3.41
LSM7-206ENST00000591515 KDM5DQ9BY66 1539 aa36.38■■■■□ 3.41
LSM7-206ENST00000591515 TOM1O60784 492 aa36.37■■■■□ 3.41
LSM7-206ENST00000591515 FBXO31Q5XUX0 539 aaPredicted RBP36.37■■■■□ 3.41
LSM7-206ENST00000591515 ALKQ9UM73 1620 aa36.37■■■■□ 3.41
LSM7-206ENST00000591515 FAM135AQ9P2D6 1515 aa36.35■■■■□ 3.41
LSM7-206ENST00000591515 EHBP1L1Q8N3D4 1523 aa36.34■■■■□ 3.41
LSM7-206ENST00000591515 DEPDC5O75140 1603 aa36.3■■■■□ 3.4
LSM7-206ENST00000591515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.29■■■■□ 3.4
LSM7-206ENST00000591515 KIF3BO15066 747 aa36.28■■■■□ 3.4
LSM7-206ENST00000591515 MED14O60244 1454 aa36.26■■■■□ 3.4
LSM7-206ENST00000591515 STRCP1A6NGW2 1772 aa36.26■■■■□ 3.4
LSM7-206ENST00000591515 UGGT1Q9NYU2 1555 aa36.26■■■■□ 3.39
LSM7-206ENST00000591515 APLP2Q06481 763 aa36.25■■■■□ 3.39
LSM7-206ENST00000591515 IQGAP1P46940 1657 aa36.25■■■■□ 3.39
LSM7-206ENST00000591515 CCDC141Q6ZP82 1450 aa36.24■■■■□ 3.39
LSM7-206ENST00000591515 NLRP1Q9C000 1473 aa36.24■■■■□ 3.39
LSM7-206ENST00000591515 ANKLE2Q86XL3 938 aa36.24■■■■□ 3.39
LSM7-206ENST00000591515 NPHP4O75161 1426 aaPredicted RBP36.24■■■■□ 3.39
LSM7-206ENST00000591515 MIA2Q96PC5 1412 aa36.22■■■■□ 3.39
LSM7-206ENST00000591515 CAMSAP2Q08AD1 1489 aa36.19■■■■□ 3.38
LSM7-206ENST00000591515 WASHC2CQ9Y4E1 1318 aa36.19■■■■□ 3.38
LSM7-206ENST00000591515 MAP3K1Q13233 1512 aa36.18■■■■□ 3.38
LSM7-206ENST00000591515 THEMISQ8N1K5 641 aaPredicted RBP36.18■■■■□ 3.38
LSM7-206ENST00000591515 PHF23Q9BUL5 403 aaPredicted RBP36.15■■■■□ 3.38
LSM7-206ENST00000591515 RNF17Q9BXT8 1623 aaKnown RBP36.14■■■■□ 3.38
LSM7-206ENST00000591515 SYNMO15061 1565 aa36.14■■■■□ 3.38
LSM7-206ENST00000591515 LRRC7Q96NW7 1537 aa36.12■■■■□ 3.37
LSM7-206ENST00000591515 ARHGEF5Q12774 1597 aa36.1■■■■□ 3.37
LSM7-206ENST00000591515 NCOA2Q15596 1464 aa36.09■■■■□ 3.37
LSM7-206ENST00000591515 ZC3H13Q5T200 1668 aaKnown RBP36.09■■■■□ 3.37
LSM7-206ENST00000591515 ABCC3O15438 1527 aa36.05■■■■□ 3.36
LSM7-206ENST00000591515 CFAP65Q6ZU64 1925 aaKnown RBP36.04■■■■□ 3.36
LSM7-206ENST00000591515 RSPH4AQ5TD94 716 aa36.03■■■■□ 3.36
LSM7-206ENST00000591515 SENP3Q9H4L4 574 aaPredicted RBP36.03■■■■□ 3.36
LSM7-206ENST00000591515 LRRC9Q6ZRR7 1453 aa36.01■■■■□ 3.36
LSM7-206ENST00000591515 UBR1Q8IWV7 1749 aa36.01■■■■□ 3.36
LSM7-206ENST00000591515 ERVK-7P63135 1459 aa35.99■■■■□ 3.35
LSM7-206ENST00000591515 XIRP1Q702N8 1843 aaKnown RBP35.99■■■■□ 3.35
LSM7-206ENST00000591515 CEP152O94986 1710 aa35.98■■■■□ 3.35
LSM7-206ENST00000591515 MROH1Q8NDA8 1641 aa35.97■■■■□ 3.35
LSM7-206ENST00000591515 EIF2AK4Q9P2K8 1649 aaKnown RBP35.97■■■■□ 3.35
LSM7-206ENST00000591515 MAST1Q9Y2H9 1570 aa35.94■■■■□ 3.34
LSM7-206ENST00000591515 TSPY4P0CV99 314 aa35.9■■■■□ 3.34
LSM7-206ENST00000591515 TSPY10P0CW01 314 aa35.9■■■■□ 3.34
LSM7-206ENST00000591515 SCAF11Q99590 1463 aaKnown RBP35.88■■■■□ 3.33
LSM7-206ENST00000591515 KANK4Q5T7N3 995 aaPredicted RBP35.86■■■■□ 3.33
LSM7-206ENST00000591515 RGS17Q9UGC6 210 aaPredicted RBP35.86■■■■□ 3.33
LSM7-206ENST00000591515 ARHGAP23Q9P227 1491 aa35.84■■■■□ 3.33
LSM7-206ENST00000591515 SLIT1O75093 1534 aa35.83■■■■□ 3.33
LSM7-206ENST00000591515 LTKP29376 864 aa35.77■■■■□ 3.32
LSM7-206ENST00000591515 PIK3C2BO00750 1634 aa35.72■■■■□ 3.31
LSM7-206ENST00000591515 DUOX2Q9NRD8 1548 aa35.72■■■■□ 3.31
LSM7-206ENST00000591515 TXNDC2Q86VQ3 553 aa35.71■■■■□ 3.31
LSM7-206ENST00000591515 PRDM15P57071 1507 aaPredicted RBP35.71■■■■□ 3.31
LSM7-206ENST00000591515 ARHGAP31Q2M1Z3 1444 aa35.67■■■■□ 3.3
LSM7-206ENST00000591515 FAM135BQ49AJ0 1406 aa35.67■■■■□ 3.3
LSM7-206ENST00000591515 ROBO1Q9Y6N7 1651 aa35.65■■■■□ 3.3
LSM7-206ENST00000591515 MYOM3Q5VTT5 1437 aa35.65■■■■□ 3.3
LSM7-206ENST00000591515 CROCC2H7BZ55 1655 aa35.62■■■■□ 3.29
LSM7-206ENST00000591515 POTEAQ6S8J7 498 aa35.61■■■■□ 3.29
LSM7-206ENST00000591515 KDM5AP29375 1690 aaKnown RBP35.61■■■■□ 3.29
LSM7-206ENST00000591515 EID1Q9Y6B2 187 aa35.6■■■■□ 3.29
LSM7-206ENST00000591515 TMEM2Q9UHN6 1383 aa35.6■■■■□ 3.29
LSM7-206ENST00000591515 TMEM94Q12767 1356 aa35.58■■■■□ 3.29
LSM7-206ENST00000591515 SETD1AO15047 1707 aaKnown RBP35.55■■■■□ 3.28
LSM7-206ENST00000591515 ERBINQ96RT1 1412 aa35.55■■■■□ 3.28
LSM7-206ENST00000591515 KIF15Q9NS87 1388 aa35.54■■■■□ 3.28
LSM7-206ENST00000591515 EFCAB6Q5THR3 1501 aa35.54■■■■□ 3.28
LSM7-206ENST00000591515 TET3O43151 1660 aa35.52■■■■□ 3.28
LSM7-206ENST00000591515 NWD1Q149M9 1564 aa35.49■■■■□ 3.27
LSM7-206ENST00000591515 KCNA6P17658 529 aa35.48■■■■□ 3.27
LSM7-206ENST00000591515 FGD6Q6ZV73 1430 aa35.46■■■■□ 3.27
LSM7-206ENST00000591515 PHLPP1O60346 1717 aa35.46■■■■□ 3.27
LSM7-206ENST00000591515 RBM33Q96EV2 1170 aaKnown RBP35.45■■■■□ 3.27
LSM7-206ENST00000591515 STAG3Q9UJ98 1225 aa35.45■■■■□ 3.27
LSM7-206ENST00000591515 ABCC5O15440 1437 aa35.45■■■■□ 3.27
LSM7-206ENST00000591515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.44■■■■□ 3.268e-8■□□□□ 9.7
LSM7-206ENST00000591515 NKTRP30414 1462 aaKnown RBP35.43■■■■□ 3.26
LSM7-206ENST00000591515 SLC26A8Q96RN1 970 aa35.43■■■■□ 3.26
LSM7-206ENST00000591515 LMTK2Q8IWU2 1503 aa35.42■■■■□ 3.26
LSM7-206ENST00000591515 PROSER2Q86WR7 435 aaPredicted RBP35.42■■■■□ 3.26
LSM7-206ENST00000591515 RRP7BPQ9NSQ0 103 aa35.42■■■■□ 3.26
LSM7-206ENST00000591515 IDI1Q13907 227 aa35.41■■■■□ 3.26
LSM7-206ENST00000591515 PPARGC1BQ86YN6 1023 aaKnown RBP35.41■■■■□ 3.26
LSM7-206ENST00000591515 PTPN23Q9H3S7 1636 aa35.41■■■■□ 3.26
LSM7-206ENST00000591515 ADGRB3O60242 1522 aa35.41■■■■□ 3.26
LSM7-206ENST00000591515 KANK1Q14678 1352 aa35.38■■■■□ 3.25
LSM7-206ENST00000591515 MYO5BQ9ULV0 1848 aa35.35■■■■□ 3.25
LSM7-206ENST00000591515 CHD2O14647 1828 aaKnown RBP35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms