RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 DUOX2Q9NRD8 1548 aa35.99■■■■□ 3.35
CLPTM1-212ENST00000591304 KDM5DQ9BY66 1539 aa35.97■■■■□ 3.35
CLPTM1-212ENST00000591304 RNF17Q9BXT8 1623 aaKnown RBP35.95■■■■□ 3.35
CLPTM1-212ENST00000591304 WASHC2CQ9Y4E1 1318 aa35.95■■■■□ 3.35
CLPTM1-212ENST00000591304 PTPRKQ15262 1439 aa35.92■■■■□ 3.34
CLPTM1-212ENST00000591304 KIF15Q9NS87 1388 aa35.92■■■■□ 3.34
CLPTM1-212ENST00000591304 FAM50AQ14320 339 aaKnown RBP35.89■■■■□ 3.34
CLPTM1-212ENST00000591304 ANKRD30AQ9BXX3 1397 aa35.89■■■■□ 3.34
CLPTM1-212ENST00000591304 ERBINQ96RT1 1412 aa35.88■■■■□ 3.33
CLPTM1-212ENST00000591304 RRP7BPQ9NSQ0 103 aa35.87■■■■□ 3.33
CLPTM1-212ENST00000591304 ZC3H13Q5T200 1668 aaKnown RBP35.87■■■■□ 3.33
CLPTM1-212ENST00000591304 DMRT2Q9Y5R5 561 aa35.83■■■■□ 3.33
CLPTM1-212ENST00000591304 PZPP20742 1482 aa35.83■■■■□ 3.33
CLPTM1-212ENST00000591304 MYO3AQ8NEV4 1616 aa35.82■■■■□ 3.32
CLPTM1-212ENST00000591304 CHIC2Q9UKJ5 165 aa35.81■■■■□ 3.32
CLPTM1-212ENST00000591304 ZNF142P52746 1687 aaPredicted RBP35.8■■■■□ 3.32
CLPTM1-212ENST00000591304 NCOA1Q15788 1441 aa35.8■■■■□ 3.32
CLPTM1-212ENST00000591304 ADGRL2O95490 1459 aa35.79■■■■□ 3.32
CLPTM1-212ENST00000591304 STRCQ7RTU9 1775 aa35.79■■■■□ 3.32
CLPTM1-212ENST00000591304 ABCC3O15438 1527 aa35.78■■■■□ 3.32
CLPTM1-212ENST00000591304 MROH1Q8NDA8 1641 aa35.77■■■■□ 3.32
CLPTM1-212ENST00000591304 CEP170BQ9Y4F5 1589 aaPredicted RBP35.75■■■■□ 3.31
CLPTM1-212ENST00000591304 PRDM15P57071 1507 aaPredicted RBP35.73■■■■□ 3.31
CLPTM1-212ENST00000591304 TNRQ92752 1358 aa35.72■■■■□ 3.31
CLPTM1-212ENST00000591304 DEPDC5O75140 1603 aa35.72■■■■□ 3.31
CLPTM1-212ENST00000591304 CAMSAP1Q5T5Y3 1602 aa35.7■■■■□ 3.31
CLPTM1-212ENST00000591304 FBXO31Q5XUX0 539 aaPredicted RBP35.7■■■■□ 3.31
CLPTM1-212ENST00000591304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.7■■■■□ 3.31
CLPTM1-212ENST00000591304 CEP152O94986 1710 aa35.69■■■■□ 3.3
CLPTM1-212ENST00000591304 PPARGC1BQ86YN6 1023 aaKnown RBP35.69■■■■□ 3.3
CLPTM1-212ENST00000591304 A2ML1A8K2U0 1454 aa35.68■■■■□ 3.3
CLPTM1-212ENST00000591304 KANK1Q14678 1352 aa35.68■■■■□ 3.3
CLPTM1-212ENST00000591304 PLA2R1Q13018 1463 aa35.65■■■■□ 3.3
CLPTM1-212ENST00000591304 PTPRTO14522 1441 aa35.65■■■■□ 3.3
CLPTM1-212ENST00000591304 NLRP1Q9C000 1473 aa35.63■■■■□ 3.29
CLPTM1-212ENST00000591304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.62■■■■□ 3.294e-7■■□□□ 12.8
CLPTM1-212ENST00000591304 SPATA31D1Q6ZQQ2 1576 aa35.6■■■■□ 3.29
CLPTM1-212ENST00000591304 ARHGAP31Q2M1Z3 1444 aa35.6■■■■□ 3.29
CLPTM1-212ENST00000591304 ANKRD50Q9ULJ7 1429 aa35.6■■■■□ 3.29
CLPTM1-212ENST00000591304 ROCK1Q13464 1354 aa35.6■■■■□ 3.29
CLPTM1-212ENST00000591304 PKD2Q13563 968 aa35.59■■■■□ 3.29
CLPTM1-212ENST00000591304 ERVK-7P63135 1459 aa35.56■■■■□ 3.28
CLPTM1-212ENST00000591304 CFAP65Q6ZU64 1925 aaKnown RBP35.55■■■■□ 3.28
CLPTM1-212ENST00000591304 LMTK2Q8IWU2 1503 aa35.54■■■■□ 3.28
CLPTM1-212ENST00000591304 VWDEQ8N2E2 1590 aa35.54■■■■□ 3.28
CLPTM1-212ENST00000591304 ILDR1Q86SU0 546 aaPredicted RBP35.52■■■■□ 3.28
CLPTM1-212ENST00000591304 THEMISQ8N1K5 641 aaPredicted RBP35.51■■■■□ 3.28
CLPTM1-212ENST00000591304 RRBP1Q9P2E9 1410 aaKnown RBP35.5■■■■□ 3.27
CLPTM1-212ENST00000591304 UGGT1Q9NYU2 1555 aa35.5■■■■□ 3.27
CLPTM1-212ENST00000591304 NCKAP5LQ9HCH0 1330 aa35.49■■■■□ 3.27
CLPTM1-212ENST00000591304 ITGAEP38570 1179 aa35.47■■■■□ 3.27
CLPTM1-212ENST00000591304 FBXO41Q8TF61 875 aa35.44■■■■□ 3.26
CLPTM1-212ENST00000591304 POLR1AO95602 1720 aaPredicted RBP35.43■■■■□ 3.26
CLPTM1-212ENST00000591304 CERKQ8TCT0 537 aa35.43■■■■□ 3.26
CLPTM1-212ENST00000591304 UNC13BO14795 1591 aa35.41■■■■□ 3.26
CLPTM1-212ENST00000591304 EFCAB6Q5THR3 1501 aa35.41■■■■□ 3.26
CLPTM1-212ENST00000591304 ANKLE2Q86XL3 938 aa35.4■■■■□ 3.26
CLPTM1-212ENST00000591304 RPRD2Q5VT52 1461 aaKnown RBP35.36■■■■□ 3.25
CLPTM1-212ENST00000591304 TET3O43151 1660 aa35.35■■■■□ 3.25
CLPTM1-212ENST00000591304 UBR1Q8IWV7 1749 aa35.35■■■■□ 3.25
CLPTM1-212ENST00000591304 GCC2Q8IWJ2 1684 aa35.32■■■■□ 3.24
CLPTM1-212ENST00000591304 NEURL4Q96JN8 1562 aa35.3■■■■□ 3.24
CLPTM1-212ENST00000591304 KDM5AP29375 1690 aaKnown RBP35.29■■■■□ 3.24
CLPTM1-212ENST00000591304 NOS1P29475 1434 aa35.29■■■■□ 3.24
CLPTM1-212ENST00000591304 LTBP4Q8N2S1 1624 aa35.28■■■■□ 3.24
CLPTM1-212ENST00000591304 IQGAP3Q86VI3 1631 aa35.28■■■■□ 3.24
CLPTM1-212ENST00000591304 MED14O60244 1454 aa35.27■■■■□ 3.24
CLPTM1-212ENST00000591304 PIK3C2BO00750 1634 aa35.26■■■■□ 3.24
CLPTM1-212ENST00000591304 SLC52A1Q9NWF4 448 aa35.25■■■■□ 3.23
CLPTM1-212ENST00000591304 STAG3Q9UJ98 1225 aa35.24■■■■□ 3.23
CLPTM1-212ENST00000591304 SYNMO15061 1565 aa35.24■■■■□ 3.23
CLPTM1-212ENST00000591304 NUP155O75694 1391 aa35.22■■■■□ 3.23
CLPTM1-212ENST00000591304 NPHP4O75161 1426 aaPredicted RBP35.22■■■■□ 3.23
CLPTM1-212ENST00000591304 SLIT1O75093 1534 aa35.22■■■■□ 3.23
CLPTM1-212ENST00000591304 IDI1Q13907 227 aa35.21■■■■□ 3.23
CLPTM1-212ENST00000591304 IQSEC2Q5JU85 1478 aa35.21■■■■□ 3.23
CLPTM1-212ENST00000591304 IQGAP1P46940 1657 aa35.19■■■■□ 3.22
CLPTM1-212ENST00000591304 ZNF335Q9H4Z2 1342 aaPredicted RBP35.19■■■■□ 3.22
CLPTM1-212ENST00000591304 ARHGAP23Q9P227 1491 aa35.19■■■■□ 3.22
CLPTM1-212ENST00000591304 E9PCH4 1651 aa35.17■■■■□ 3.22
CLPTM1-212ENST00000591304 EID1Q9Y6B2 187 aa35.16■■■■□ 3.22
CLPTM1-212ENST00000591304 SCAF11Q99590 1463 aaKnown RBP35.16■■■■□ 3.22
CLPTM1-212ENST00000591304 NAIPQ13075 1403 aa35.15■■■■□ 3.22
CLPTM1-212ENST00000591304 TXNDC2Q86VQ3 553 aa35.13■■■■□ 3.21
CLPTM1-212ENST00000591304 TMEM2Q9UHN6 1383 aa35.13■■■■□ 3.21
CLPTM1-212ENST00000591304 ADGRB3O60242 1522 aa35.11■■■■□ 3.21
CLPTM1-212ENST00000591304 HFM1A2PYH4 1435 aa35.1■■■■□ 3.21
CLPTM1-212ENST00000591304 CPS1P31327 1500 aa35.07■■■■□ 3.21
CLPTM1-212ENST00000591304 LTKP29376 864 aa35.07■■■■□ 3.2
CLPTM1-212ENST00000591304 HDGFP51858 240 aaKnown RBP35■■■■□ 3.19
CLPTM1-212ENST00000591304 TMEM131LA2VDJ0 1609 aa34.99■■■■□ 3.19
CLPTM1-212ENST00000591304 MYO5BQ9ULV0 1848 aa34.97■■■■□ 3.19
CLPTM1-212ENST00000591304 SPHKAPQ2M3C7 1700 aa34.96■■■■□ 3.19
CLPTM1-212ENST00000591304 TRIM52Q96A61 297 aa34.92■■■■□ 3.18
CLPTM1-212ENST00000591304 CHGAP10645 457 aaKnown RBP34.9■■■■□ 3.18
CLPTM1-212ENST00000591304 ZFYVE9O95405 1425 aa34.89■■■■□ 3.18
CLPTM1-212ENST00000591304 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.88■■■■□ 3.17
CLPTM1-212ENST00000591304 ACIN1Q9UKV3 1341 aaKnown RBP34.87■■■■□ 3.17
CLPTM1-212ENST00000591304 RIMS2Q9UQ26 1411 aa34.87■■■■□ 3.17
CLPTM1-212ENST00000591304 STRCP1A6NGW2 1772 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms