RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
DDX39A-216ENST00000591275 TNRQ92752 1358 aa25.62■■□□□ 1.69
DDX39A-216ENST00000591275 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
DDX39A-216ENST00000591275 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
DDX39A-216ENST00000591275 CCDC141Q6ZP82 1450 aa25.6■■□□□ 1.69
DDX39A-216ENST00000591275 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
DDX39A-216ENST00000591275 KDM5DQ9BY66 1539 aa25.58■■□□□ 1.69
DDX39A-216ENST00000591275 PZPP20742 1482 aa25.58■■□□□ 1.69
DDX39A-216ENST00000591275 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
DDX39A-216ENST00000591275 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
DDX39A-216ENST00000591275 WASHC2CQ9Y4E1 1318 aa25.57■■□□□ 1.68
DDX39A-216ENST00000591275 NCOA2Q15596 1464 aa25.55■■□□□ 1.68
DDX39A-216ENST00000591275 HSPA1LP34931 641 aa25.54■■□□□ 1.68
DDX39A-216ENST00000591275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.54■■□□□ 1.684e-9■□□□□ 10.2
DDX39A-216ENST00000591275 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
DDX39A-216ENST00000591275 CPS1P31327 1500 aa25.53■■□□□ 1.68
DDX39A-216ENST00000591275 ANKLE2Q86XL3 938 aa25.52■■□□□ 1.68
DDX39A-216ENST00000591275 FAM135AQ9P2D6 1515 aa25.51■■□□□ 1.67
DDX39A-216ENST00000591275 TOM1O60784 492 aa25.5■■□□□ 1.67
DDX39A-216ENST00000591275 MIA2Q96PC5 1412 aa25.5■■□□□ 1.67
DDX39A-216ENST00000591275 RSPH4AQ5TD94 716 aa25.49■■□□□ 1.67
DDX39A-216ENST00000591275 THEMISQ8N1K5 641 aaPredicted RBP25.48■■□□□ 1.67
DDX39A-216ENST00000591275 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
DDX39A-216ENST00000591275 VWDEQ8N2E2 1590 aa25.47■■□□□ 1.67
DDX39A-216ENST00000591275 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
DDX39A-216ENST00000591275 ARHGEF5Q12774 1597 aa25.45■■□□□ 1.66
DDX39A-216ENST00000591275 MED1Q15648 1581 aaPredicted RBP25.45■■□□□ 1.66
DDX39A-216ENST00000591275 TSPY4P0CV99 314 aa25.45■■□□□ 1.66
DDX39A-216ENST00000591275 TSPY10P0CW01 314 aa25.45■■□□□ 1.66
DDX39A-216ENST00000591275 NPHP4O75161 1426 aaPredicted RBP25.45■■□□□ 1.66
DDX39A-216ENST00000591275 DEPDC5O75140 1603 aa25.41■■□□□ 1.66
DDX39A-216ENST00000591275 MED14O60244 1454 aa25.41■■□□□ 1.66
DDX39A-216ENST00000591275 IQGAP1P46940 1657 aa25.39■■□□□ 1.65
DDX39A-216ENST00000591275 ABCC3O15438 1527 aa25.38■■□□□ 1.65
DDX39A-216ENST00000591275 RNF17Q9BXT8 1623 aaKnown RBP25.38■■□□□ 1.65
DDX39A-216ENST00000591275 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
DDX39A-216ENST00000591275 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
DDX39A-216ENST00000591275 STRCP1A6NGW2 1772 aa25.34■■□□□ 1.65
DDX39A-216ENST00000591275 ZC3H13Q5T200 1668 aaKnown RBP25.33■■□□□ 1.65
DDX39A-216ENST00000591275 MAST1Q9Y2H9 1570 aa25.33■■□□□ 1.65
DDX39A-216ENST00000591275 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.65
DDX39A-216ENST00000591275 ERVK-7P63135 1459 aa25.33■■□□□ 1.65
DDX39A-216ENST00000591275 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
DDX39A-216ENST00000591275 CEP152O94986 1710 aa25.3■■□□□ 1.64
DDX39A-216ENST00000591275 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
DDX39A-216ENST00000591275 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
DDX39A-216ENST00000591275 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
DDX39A-216ENST00000591275 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
DDX39A-216ENST00000591275 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
DDX39A-216ENST00000591275 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
DDX39A-216ENST00000591275 UBR1Q8IWV7 1749 aa25.26■■□□□ 1.63
DDX39A-216ENST00000591275 SYNMO15061 1565 aa25.24■■□□□ 1.63
DDX39A-216ENST00000591275 SCAF11Q99590 1463 aaKnown RBP25.22■■□□□ 1.63
DDX39A-216ENST00000591275 MYOM3Q5VTT5 1437 aa25.22■■□□□ 1.63
DDX39A-216ENST00000591275 LTKP29376 864 aa25.21■■□□□ 1.63
DDX39A-216ENST00000591275 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
DDX39A-216ENST00000591275 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
DDX39A-216ENST00000591275 TXNDC2Q86VQ3 553 aa25.19■■□□□ 1.62
DDX39A-216ENST00000591275 ARHGAP23Q9P227 1491 aa25.16■■□□□ 1.62
DDX39A-216ENST00000591275 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
DDX39A-216ENST00000591275 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
DDX39A-216ENST00000591275 SLIT1O75093 1534 aa25.15■■□□□ 1.62
DDX39A-216ENST00000591275 PRDM15P57071 1507 aaPredicted RBP25.14■■□□□ 1.62
DDX39A-216ENST00000591275 MAP3K1Q13233 1512 aa25.14■■□□□ 1.62
DDX39A-216ENST00000591275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.14■■□□□ 1.628e-8■■■□□ 17.9
DDX39A-216ENST00000591275 ARHGAP31Q2M1Z3 1444 aa25.13■■□□□ 1.61
DDX39A-216ENST00000591275 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
DDX39A-216ENST00000591275 EID1Q9Y6B2 187 aa25.12■■□□□ 1.61
DDX39A-216ENST00000591275 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
DDX39A-216ENST00000591275 ABCC5O15440 1437 aa25.11■■□□□ 1.61
DDX39A-216ENST00000591275 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
DDX39A-216ENST00000591275 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
DDX39A-216ENST00000591275 STAG3Q9UJ98 1225 aa25.08■■□□□ 1.61
DDX39A-216ENST00000591275 TMEM2Q9UHN6 1383 aa25.06■■□□□ 1.6
DDX39A-216ENST00000591275 PTPN23Q9H3S7 1636 aa25.06■■□□□ 1.6
DDX39A-216ENST00000591275 RGS17Q9UGC6 210 aaPredicted RBP25.05■■□□□ 1.6
DDX39A-216ENST00000591275 KANK1Q14678 1352 aa25.05■■□□□ 1.6
DDX39A-216ENST00000591275 DAPK1P53355 1430 aa25.03■■□□□ 1.6
DDX39A-216ENST00000591275 EFCAB6Q5THR3 1501 aa25.02■■□□□ 1.6
DDX39A-216ENST00000591275 IDI1Q13907 227 aa25.01■■□□□ 1.59
DDX39A-216ENST00000591275 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
DDX39A-216ENST00000591275 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
DDX39A-216ENST00000591275 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
DDX39A-216ENST00000591275 SLC26A8Q96RN1 970 aa25■■□□□ 1.59
DDX39A-216ENST00000591275 FAM135BQ49AJ0 1406 aa24.99■■□□□ 1.59
DDX39A-216ENST00000591275 KCNA6P17658 529 aa24.97■■□□□ 1.59
DDX39A-216ENST00000591275 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
DDX39A-216ENST00000591275 APLP2Q06481 763 aa24.96■■□□□ 1.59
DDX39A-216ENST00000591275 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
DDX39A-216ENST00000591275 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
DDX39A-216ENST00000591275 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.59
DDX39A-216ENST00000591275 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.59
DDX39A-216ENST00000591275 TET3O43151 1660 aa24.94■■□□□ 1.58
DDX39A-216ENST00000591275 ROBO1Q9Y6N7 1651 aa24.94■■□□□ 1.58
DDX39A-216ENST00000591275 BCANQ96GW7 911 aa24.91■■□□□ 1.58
DDX39A-216ENST00000591275 NOS1P29475 1434 aa24.91■■□□□ 1.58
DDX39A-216ENST00000591275 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
DDX39A-216ENST00000591275 POTEAQ6S8J7 498 aa24.9■■□□□ 1.58
DDX39A-216ENST00000591275 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
DDX39A-216ENST00000591275 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms