RNA–Protein interactions for RNA: ENST00000590880.1

CACNA2D4-226, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 404 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-226ENST00000590880 IQSEC2Q5JU85 1478 aa14.67□□□□□ -0.06
CACNA2D4-226ENST00000590880 SPATA31D1Q6ZQQ2 1576 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 CAMSAP2Q08AD1 1489 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 SETD5Q9C0A6 1442 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
CACNA2D4-226ENST00000590880 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
CACNA2D4-226ENST00000590880 PLXNC1O60486 1568 aa14.65□□□□□ -0.06
CACNA2D4-226ENST00000590880 PKD2Q13563 968 aa14.64□□□□□ -0.07
CACNA2D4-226ENST00000590880 CROCC2H7BZ55 1655 aa14.64□□□□□ -0.07
CACNA2D4-226ENST00000590880 ADGBQ8N7X0 1667 aa14.64□□□□□ -0.07
CACNA2D4-226ENST00000590880 CEP170BQ9Y4F5 1589 aaPredicted RBP14.64□□□□□ -0.07
CACNA2D4-226ENST00000590880 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
CACNA2D4-226ENST00000590880 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
CACNA2D4-226ENST00000590880 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
CACNA2D4-226ENST00000590880 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
CACNA2D4-226ENST00000590880 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
CACNA2D4-226ENST00000590880 ZNF335Q9H4Z2 1342 aaPredicted RBP14.62□□□□□ -0.07
CACNA2D4-226ENST00000590880 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
CACNA2D4-226ENST00000590880 DAPK1P53355 1430 aa14.61□□□□□ -0.07
CACNA2D4-226ENST00000590880 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
CACNA2D4-226ENST00000590880 ZNF644Q9H582 1327 aaPredicted RBP14.6□□□□□ -0.07
CACNA2D4-226ENST00000590880 ARHGEF5Q12774 1597 aa14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 KIF3BO15066 747 aa14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 RTEL1-TNFRSF6BF6WH68 1400 aa14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 A2ML1A8K2U0 1454 aa14.57□□□□□ -0.08
CACNA2D4-226ENST00000590880 ROCK1Q13464 1354 aa14.56□□□□□ -0.08
CACNA2D4-226ENST00000590880 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
CACNA2D4-226ENST00000590880 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
CACNA2D4-226ENST00000590880 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
CACNA2D4-226ENST00000590880 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 TNRQ92752 1358 aa14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 ABCC5O15440 1437 aa14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 KDM5DQ9BY66 1539 aa14.55□□□□□ -0.08
CACNA2D4-226ENST00000590880 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
CACNA2D4-226ENST00000590880 NAIPQ13075 1403 aa14.54□□□□□ -0.08
CACNA2D4-226ENST00000590880 RSPH4AQ5TD94 716 aa14.52□□□□□ -0.09
CACNA2D4-226ENST00000590880 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 ADGRL2O95490 1459 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 PZPP20742 1482 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 TSPY4P0CV99 314 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 TSPY10P0CW01 314 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 CHIC2Q9UKJ5 165 aa14.51□□□□□ -0.09
CACNA2D4-226ENST00000590880 POLR1AO95602 1720 aaPredicted RBP14.5□□□□□ -0.09
CACNA2D4-226ENST00000590880 PIP4K2BP78356 416 aa14.5□□□□□ -0.09
CACNA2D4-226ENST00000590880 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
CACNA2D4-226ENST00000590880 ANKRD30AQ9BXX3 1397 aa14.49□□□□□ -0.09
CACNA2D4-226ENST00000590880 TOM1O60784 492 aa14.49□□□□□ -0.09
CACNA2D4-226ENST00000590880 ANKLE2Q86XL3 938 aa14.49□□□□□ -0.09
CACNA2D4-226ENST00000590880 CPS1P31327 1500 aa14.48□□□□□ -0.09
CACNA2D4-226ENST00000590880 THEMISQ8N1K5 641 aaPredicted RBP14.48□□□□□ -0.09
CACNA2D4-226ENST00000590880 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
CACNA2D4-226ENST00000590880 MAST1Q9Y2H9 1570 aa14.47□□□□□ -0.09
CACNA2D4-226ENST00000590880 NLRP1Q9C000 1473 aa14.47□□□□□ -0.09
CACNA2D4-226ENST00000590880 UGGT1Q9NYU2 1555 aa14.46□□□□□ -0.09
CACNA2D4-226ENST00000590880 NEURL4Q96JN8 1562 aa14.45□□□□□ -0.1
CACNA2D4-226ENST00000590880 NPHP4O75161 1426 aaPredicted RBP14.43□□□□□ -0.1
CACNA2D4-226ENST00000590880 HSPA1LP34931 641 aa14.43□□□□□ -0.1
CACNA2D4-226ENST00000590880 ZC3H13Q5T200 1668 aaKnown RBP14.41□□□□□ -0.1
CACNA2D4-226ENST00000590880 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
CACNA2D4-226ENST00000590880 PHF23Q9BUL5 403 aaPredicted RBP14.4□□□□□ -0.1
CACNA2D4-226ENST00000590880 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
CACNA2D4-226ENST00000590880 KIF15Q9NS87 1388 aa14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 RNF17Q9BXT8 1623 aaKnown RBP14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 ABCC3O15438 1527 aa14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 ANKRD50Q9ULJ7 1429 aa14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 IQGAP1P46940 1657 aa14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
CACNA2D4-226ENST00000590880 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
CACNA2D4-226ENST00000590880 VWDEQ8N2E2 1590 aa14.38□□□□□ -0.11
CACNA2D4-226ENST00000590880 MED14O60244 1454 aa14.38□□□□□ -0.11
CACNA2D4-226ENST00000590880 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
CACNA2D4-226ENST00000590880 ERVK-7P63135 1459 aa14.37□□□□□ -0.11
CACNA2D4-226ENST00000590880 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
CACNA2D4-226ENST00000590880 CEP152O94986 1710 aa14.33□□□□□ -0.12
CACNA2D4-226ENST00000590880 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
CACNA2D4-226ENST00000590880 SYNMO15061 1565 aa14.33□□□□□ -0.12
CACNA2D4-226ENST00000590880 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
CACNA2D4-226ENST00000590880 EID1Q9Y6B2 187 aa14.32□□□□□ -0.12
CACNA2D4-226ENST00000590880 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
CACNA2D4-226ENST00000590880 UNC13BO14795 1591 aa14.31□□□□□ -0.12
CACNA2D4-226ENST00000590880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
CACNA2D4-226ENST00000590880 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
CACNA2D4-226ENST00000590880 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
CACNA2D4-226ENST00000590880 TXNDC2Q86VQ3 553 aa14.3□□□□□ -0.12
CACNA2D4-226ENST00000590880 KANK1Q14678 1352 aa14.3□□□□□ -0.12
CACNA2D4-226ENST00000590880 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
CACNA2D4-226ENST00000590880 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
CACNA2D4-226ENST00000590880 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
CACNA2D4-226ENST00000590880 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
CACNA2D4-226ENST00000590880 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
CACNA2D4-226ENST00000590880 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
CACNA2D4-226ENST00000590880 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
CACNA2D4-226ENST00000590880 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.13
CACNA2D4-226ENST00000590880 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms