RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PLA2R1Q13018 1463 aa34.42■■■■□ 3.1
DDX39A-215ENST00000590696 PKD2Q13563 968 aa34.41■■■■□ 3.1
DDX39A-215ENST00000590696 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
DDX39A-215ENST00000590696 WASHC2CQ9Y4E1 1318 aa34.39■■■■□ 3.1
DDX39A-215ENST00000590696 FBXO31Q5XUX0 539 aaPredicted RBP34.39■■■■□ 3.1
DDX39A-215ENST00000590696 FAM135AQ9P2D6 1515 aa34.37■■■■□ 3.09
DDX39A-215ENST00000590696 A2ML1A8K2U0 1454 aa34.37■■■■□ 3.09
DDX39A-215ENST00000590696 TCOF1Q13428 1488 aaKnown RBP34.36■■■■□ 3.09
DDX39A-215ENST00000590696 MYOM3Q5VTT5 1437 aa34.34■■■■□ 3.09
DDX39A-215ENST00000590696 TNRQ92752 1358 aa34.34■■■■□ 3.09
DDX39A-215ENST00000590696 PZPP20742 1482 aa34.33■■■■□ 3.09
DDX39A-215ENST00000590696 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
DDX39A-215ENST00000590696 DNMT1P26358 1616 aaKnown RBP34.33■■■■□ 3.09
DDX39A-215ENST00000590696 MAST1Q9Y2H9 1570 aa34.32■■■■□ 3.09
DDX39A-215ENST00000590696 ZNF335Q9H4Z2 1342 aaPredicted RBP34.31■■■■□ 3.08
DDX39A-215ENST00000590696 IQSEC2Q5JU85 1478 aa34.3■■■■□ 3.08
DDX39A-215ENST00000590696 APLP2Q06481 763 aa34.23■■■■□ 3.07
DDX39A-215ENST00000590696 RNF17Q9BXT8 1623 aaKnown RBP34.22■■■■□ 3.07
DDX39A-215ENST00000590696 EIF2AK4Q9P2K8 1649 aaKnown RBP34.19■■■■□ 3.06
DDX39A-215ENST00000590696 ABCC3O15438 1527 aa34.17■■■■□ 3.06
DDX39A-215ENST00000590696 NLRP1Q9C000 1473 aa34.16■■■■□ 3.06
DDX39A-215ENST00000590696 THEMISQ8N1K5 641 aaPredicted RBP34.15■■■■□ 3.06
DDX39A-215ENST00000590696 POLR1AO95602 1720 aaPredicted RBP34.15■■■■□ 3.06
DDX39A-215ENST00000590696 ZC3H13Q5T200 1668 aaKnown RBP34.15■■■■□ 3.06
DDX39A-215ENST00000590696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.14■■■■□ 3.064e-9■□□□□ 10.2
DDX39A-215ENST00000590696 DUOX2Q9NRD8 1548 aa34.13■■■■□ 3.05
DDX39A-215ENST00000590696 NEURL4Q96JN8 1562 aa34.12■■■■□ 3.05
DDX39A-215ENST00000590696 UGGT1Q9NYU2 1555 aa34.12■■■■□ 3.05
DDX39A-215ENST00000590696 ANKLE2Q86XL3 938 aa34.12■■■■□ 3.05
DDX39A-215ENST00000590696 MROH1Q8NDA8 1641 aa34.12■■■■□ 3.05
DDX39A-215ENST00000590696 PTPN23Q9H3S7 1636 aa34.11■■■■□ 3.05
DDX39A-215ENST00000590696 ABCC5O15440 1437 aa34.1■■■■□ 3.05
DDX39A-215ENST00000590696 UBAP1LF5GYI3 381 aa34.09■■■■□ 3.05
DDX39A-215ENST00000590696 SPATA31D1Q6ZQQ2 1576 aa34.08■■■■□ 3.05
DDX39A-215ENST00000590696 KIF15Q9NS87 1388 aa34.07■■■■□ 3.04
DDX39A-215ENST00000590696 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
DDX39A-215ENST00000590696 CROCC2H7BZ55 1655 aa34.06■■■■□ 3.04
DDX39A-215ENST00000590696 RRP7BPQ9NSQ0 103 aa34.06■■■■□ 3.04
DDX39A-215ENST00000590696 CEP152O94986 1710 aa34.06■■■■□ 3.04
DDX39A-215ENST00000590696 ERVK-7P63135 1459 aa34.05■■■■□ 3.04
DDX39A-215ENST00000590696 DISP3Q9P2K9 1392 aa34.04■■■■□ 3.04
DDX39A-215ENST00000590696 DAPK1P53355 1430 aa34.03■■■■□ 3.04
DDX39A-215ENST00000590696 FGD6Q6ZV73 1430 aa34.03■■■■□ 3.04
DDX39A-215ENST00000590696 ERBINQ96RT1 1412 aa34■■■■□ 3.03
DDX39A-215ENST00000590696 NPHP4O75161 1426 aaPredicted RBP33.99■■■■□ 3.03
DDX39A-215ENST00000590696 DEPDC5O75140 1603 aa33.99■■■■□ 3.03
DDX39A-215ENST00000590696 MED14O60244 1454 aa33.99■■■■□ 3.03
DDX39A-215ENST00000590696 CFAP65Q6ZU64 1925 aaKnown RBP33.98■■■■□ 3.03
DDX39A-215ENST00000590696 CPS1P31327 1500 aa33.97■■■■□ 3.03
DDX39A-215ENST00000590696 PRDM15P57071 1507 aaPredicted RBP33.96■■■■□ 3.03
DDX39A-215ENST00000590696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.95■■■■□ 3.038e-8■■■□□ 17.9
DDX39A-215ENST00000590696 CHIC2Q9UKJ5 165 aa33.94■■■■□ 3.02
DDX39A-215ENST00000590696 VWDEQ8N2E2 1590 aa33.93■■■■□ 3.02
DDX39A-215ENST00000590696 ARHGAP31Q2M1Z3 1444 aa33.92■■■■□ 3.02
DDX39A-215ENST00000590696 IQGAP1P46940 1657 aa33.9■■■■□ 3.02
DDX39A-215ENST00000590696 ANKRD30AQ9BXX3 1397 aa33.9■■■■□ 3.02
DDX39A-215ENST00000590696 UBR1Q8IWV7 1749 aa33.88■■■■□ 3.01
DDX39A-215ENST00000590696 KANK1Q14678 1352 aa33.87■■■■□ 3.01
DDX39A-215ENST00000590696 ILDR2Q71H61 639 aa33.87■■■■□ 3.01
DDX39A-215ENST00000590696 TOM1O60784 492 aa33.84■■■■□ 3.01
DDX39A-215ENST00000590696 SCAF1Q9H7N4 1312 aaKnown RBP33.83■■■■□ 3.01
DDX39A-215ENST00000590696 PIP4K2BP78356 416 aa33.82■■■■□ 3
DDX39A-215ENST00000590696 FAM50AQ14320 339 aaKnown RBP33.8■■■■□ 3
DDX39A-215ENST00000590696 SCAF11Q99590 1463 aaKnown RBP33.79■■■■□ 3
DDX39A-215ENST00000590696 TXNDC2Q86VQ3 553 aa33.78■■■■□ 3
DDX39A-215ENST00000590696 ARHGAP23Q9P227 1491 aa33.77■■■■□ 3
DDX39A-215ENST00000590696 LTKP29376 864 aa33.77■■■■□ 3
DDX39A-215ENST00000590696 LMTK2Q8IWU2 1503 aa33.77■■■■□ 3
DDX39A-215ENST00000590696 SLIT1O75093 1534 aa33.76■■■■□ 3
DDX39A-215ENST00000590696 ADGRL2O95490 1459 aa33.76■■■□□ 2.99
DDX39A-215ENST00000590696 STRCP1A6NGW2 1772 aa33.75■■■□□ 2.99
DDX39A-215ENST00000590696 PIK3C2BO00750 1634 aa33.75■■■□□ 2.99
DDX39A-215ENST00000590696 HSPA1LP34931 641 aa33.73■■■□□ 2.99
DDX39A-215ENST00000590696 STAG3Q9UJ98 1225 aa33.72■■■□□ 2.99
DDX39A-215ENST00000590696 EID1Q9Y6B2 187 aa33.72■■■□□ 2.99
DDX39A-215ENST00000590696 LRRC7Q96NW7 1537 aa33.7■■■□□ 2.99
DDX39A-215ENST00000590696 IDI1Q13907 227 aa33.69■■■□□ 2.98
DDX39A-215ENST00000590696 TMEM2Q9UHN6 1383 aa33.67■■■□□ 2.98
DDX39A-215ENST00000590696 ALKQ9UM73 1620 aa33.66■■■□□ 2.98
DDX39A-215ENST00000590696 SYNMO15061 1565 aa33.65■■■□□ 2.98
DDX39A-215ENST00000590696 EFCAB6Q5THR3 1501 aa33.65■■■□□ 2.98
DDX39A-215ENST00000590696 ANKRD50Q9ULJ7 1429 aa33.64■■■□□ 2.98
DDX39A-215ENST00000590696 SOCS7O14512 581 aa33.64■■■□□ 2.98
DDX39A-215ENST00000590696 NOS1P29475 1434 aa33.63■■■□□ 2.97
DDX39A-215ENST00000590696 KDM5AP29375 1690 aaKnown RBP33.62■■■□□ 2.97
DDX39A-215ENST00000590696 SLC52A1Q9NWF4 448 aa33.56■■■□□ 2.96
DDX39A-215ENST00000590696 RPRD2Q5VT52 1461 aaKnown RBP33.53■■■□□ 2.96
DDX39A-215ENST00000590696 ADGRB3O60242 1522 aa33.53■■■□□ 2.96
DDX39A-215ENST00000590696 SENP3Q9H4L4 574 aaPredicted RBP33.49■■■□□ 2.95
DDX39A-215ENST00000590696 TET3O43151 1660 aa33.48■■■□□ 2.95
DDX39A-215ENST00000590696 MED1Q15648 1581 aaPredicted RBP33.48■■■□□ 2.95
DDX39A-215ENST00000590696 SLC26A8Q96RN1 970 aa33.48■■■□□ 2.95
DDX39A-215ENST00000590696 XIRP1Q702N8 1843 aaKnown RBP33.47■■■□□ 2.95
DDX39A-215ENST00000590696 UNC13BO14795 1591 aa33.45■■■□□ 2.95
DDX39A-215ENST00000590696 ROCK1Q13464 1354 aa33.45■■■□□ 2.94
DDX39A-215ENST00000590696 KCNA6P17658 529 aa33.44■■■□□ 2.94
DDX39A-215ENST00000590696 GCC2Q8IWJ2 1684 aa33.42■■■□□ 2.94
DDX39A-215ENST00000590696 BCANQ96GW7 911 aa33.42■■■□□ 2.94
DDX39A-215ENST00000590696 PPARGC1BQ86YN6 1023 aaKnown RBP33.41■■■□□ 2.94
DDX39A-215ENST00000590696 ITGAEP38570 1179 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms