RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.31■■□□□ 1.16
LSM12-203ENST00000590563 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
LSM12-203ENST00000590563 CCDC18Q5T9S5 1454 aa22.3■■□□□ 1.16
LSM12-203ENST00000590563 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
LSM12-203ENST00000590563 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
LSM12-203ENST00000590563 ADGBQ8N7X0 1667 aa22.29■■□□□ 1.16
LSM12-203ENST00000590563 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
LSM12-203ENST00000590563 POTEAQ6S8J7 498 aa22.28■■□□□ 1.16
LSM12-203ENST00000590563 PZPP20742 1482 aa22.28■■□□□ 1.16
LSM12-203ENST00000590563 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
LSM12-203ENST00000590563 ANKLE2Q86XL3 938 aa22.26■■□□□ 1.15
LSM12-203ENST00000590563 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
LSM12-203ENST00000590563 SETD1AO15047 1707 aaKnown RBP22.24■■□□□ 1.15
LSM12-203ENST00000590563 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
LSM12-203ENST00000590563 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
LSM12-203ENST00000590563 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
LSM12-203ENST00000590563 KDM5DQ9BY66 1539 aa22.21■■□□□ 1.15
LSM12-203ENST00000590563 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
LSM12-203ENST00000590563 ZC3H13Q5T200 1668 aaKnown RBP22.18■■□□□ 1.14
LSM12-203ENST00000590563 MIA2Q96PC5 1412 aa22.18■■□□□ 1.14
LSM12-203ENST00000590563 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
LSM12-203ENST00000590563 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
LSM12-203ENST00000590563 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
LSM12-203ENST00000590563 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.14
LSM12-203ENST00000590563 XIRP1Q702N8 1843 aaKnown RBP22.14■■□□□ 1.13
LSM12-203ENST00000590563 MBD5Q9P267 1494 aa22.14■■□□□ 1.13
LSM12-203ENST00000590563 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
LSM12-203ENST00000590563 RTEL1-TNFRSF6BF6WH68 1400 aa22.12■■□□□ 1.13
LSM12-203ENST00000590563 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
LSM12-203ENST00000590563 FAM135BQ49AJ0 1406 aa22.1■■□□□ 1.13
LSM12-203ENST00000590563 ZNF644Q9H582 1327 aaPredicted RBP22.07■■□□□ 1.12
LSM12-203ENST00000590563 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
LSM12-203ENST00000590563 KIF3BO15066 747 aa22.06■■□□□ 1.12
LSM12-203ENST00000590563 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
LSM12-203ENST00000590563 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
LSM12-203ENST00000590563 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
LSM12-203ENST00000590563 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
LSM12-203ENST00000590563 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
LSM12-203ENST00000590563 NCOA2Q15596 1464 aa22■■□□□ 1.11
LSM12-203ENST00000590563 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
LSM12-203ENST00000590563 UPF1Q92900 1129 aaKnown RBP eCLIP21.99■■□□□ 1.11
LSM12-203ENST00000590563 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
LSM12-203ENST00000590563 ABCC3O15438 1527 aa21.97■■□□□ 1.11
LSM12-203ENST00000590563 MAP3K1Q13233 1512 aa21.97■■□□□ 1.11
LSM12-203ENST00000590563 SLIT1O75093 1534 aa21.96■■□□□ 1.11
LSM12-203ENST00000590563 LTKP29376 864 aa21.94■■□□□ 1.1
LSM12-203ENST00000590563 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
LSM12-203ENST00000590563 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
LSM12-203ENST00000590563 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
LSM12-203ENST00000590563 LRP6O75581 1613 aa21.89■■□□□ 1.09
LSM12-203ENST00000590563 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.09
LSM12-203ENST00000590563 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
LSM12-203ENST00000590563 JCADQ9P266 1359 aa21.87■■□□□ 1.09
LSM12-203ENST00000590563 PHLPP1O60346 1717 aa21.86■■□□□ 1.09
LSM12-203ENST00000590563 CAMSAP2Q08AD1 1489 aa21.86■■□□□ 1.09
LSM12-203ENST00000590563 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
LSM12-203ENST00000590563 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
LSM12-203ENST00000590563 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
LSM12-203ENST00000590563 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
LSM12-203ENST00000590563 PRDM15P57071 1507 aaPredicted RBP21.81■■□□□ 1.08
LSM12-203ENST00000590563 CEP152O94986 1710 aa21.81■■□□□ 1.08
LSM12-203ENST00000590563 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
LSM12-203ENST00000590563 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
LSM12-203ENST00000590563 NWD1Q149M9 1564 aa21.81■■□□□ 1.08
LSM12-203ENST00000590563 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
LSM12-203ENST00000590563 EIF2AK4Q9P2K8 1649 aaKnown RBP21.8■■□□□ 1.08
LSM12-203ENST00000590563 TET3O43151 1660 aa21.78■■□□□ 1.08
LSM12-203ENST00000590563 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
LSM12-203ENST00000590563 PIK3C2BO00750 1634 aa21.77■■□□□ 1.08
LSM12-203ENST00000590563 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
LSM12-203ENST00000590563 KCNA6P17658 529 aa21.77■■□□□ 1.08
LSM12-203ENST00000590563 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
LSM12-203ENST00000590563 CDK12Q9NYV4 1490 aaPredicted RBP21.75■■□□□ 1.07
LSM12-203ENST00000590563 FGD6Q6ZV73 1430 aa21.74■■□□□ 1.07
LSM12-203ENST00000590563 RSPH4AQ5TD94 716 aa21.74■■□□□ 1.07
LSM12-203ENST00000590563 ZNF772Q68DY9 489 aaPredicted RBP21.74■■□□□ 1.07
LSM12-203ENST00000590563 PROSER2Q86WR7 435 aaPredicted RBP21.74■■□□□ 1.07
LSM12-203ENST00000590563 EID1Q9Y6B2 187 aa21.74■■□□□ 1.07
LSM12-203ENST00000590563 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
LSM12-203ENST00000590563 SPATA31A6Q5VVP1 1343 aa21.73■■□□□ 1.07
LSM12-203ENST00000590563 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
LSM12-203ENST00000590563 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
LSM12-203ENST00000590563 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
LSM12-203ENST00000590563 MSH6P52701 1360 aa21.71■■□□□ 1.07
LSM12-203ENST00000590563 SHPRHQ149N8 1683 aa21.7■■□□□ 1.06
LSM12-203ENST00000590563 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
LSM12-203ENST00000590563 KDM5AP29375 1690 aaKnown RBP21.69■■□□□ 1.06
LSM12-203ENST00000590563 SLC26A8Q96RN1 970 aa21.68■■□□□ 1.06
LSM12-203ENST00000590563 EFCAB6Q5THR3 1501 aa21.68■■□□□ 1.06
LSM12-203ENST00000590563 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
LSM12-203ENST00000590563 RXRBP28702 533 aa21.67■■□□□ 1.06
LSM12-203ENST00000590563 MEX3CQ5U5Q3 659 aaKnown RBP21.67■■□□□ 1.06
LSM12-203ENST00000590563 RGS12O14924 1447 aa21.64■■□□□ 1.06
LSM12-203ENST00000590563 TSPY4P0CV99 314 aa21.64■■□□□ 1.05
LSM12-203ENST00000590563 TSPY10P0CW01 314 aa21.64■■□□□ 1.05
LSM12-203ENST00000590563 DIP2AQ14689 1571 aa21.64■■□□□ 1.05
LSM12-203ENST00000590563 DUOX2Q9NRD8 1548 aa21.59■■□□□ 1.05
LSM12-203ENST00000590563 ADGRB3O60242 1522 aa21.58■■□□□ 1.04
LSM12-203ENST00000590563 IDI1Q13907 227 aa21.56■■□□□ 1.04
LSM12-203ENST00000590563 CHD2O14647 1828 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms