RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
SCAMP4-212ENST00000590266 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
SCAMP4-212ENST00000590266 C3P01024 1663 aa21.46■■□□□ 1.03
SCAMP4-212ENST00000590266 NCOA1Q15788 1441 aa21.45■■□□□ 1.02
SCAMP4-212ENST00000590266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCAMP4-212ENST00000590266 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
SCAMP4-212ENST00000590266 ERBINQ96RT1 1412 aa21.44■■□□□ 1.02
SCAMP4-212ENST00000590266 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
SCAMP4-212ENST00000590266 FBXO41Q8TF61 875 aa21.43■■□□□ 1.02
SCAMP4-212ENST00000590266 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
SCAMP4-212ENST00000590266 MROH2AA6NES4 1674 aa21.41■■□□□ 1.02
SCAMP4-212ENST00000590266 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
SCAMP4-212ENST00000590266 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-212ENST00000590266 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
SCAMP4-212ENST00000590266 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-212ENST00000590266 NPATQ14207 1427 aa21.38■■□□□ 1.01
SCAMP4-212ENST00000590266 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
SCAMP4-212ENST00000590266 RRBP1Q9P2E9 1410 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-212ENST00000590266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.36■■□□□ 1.019e-7■■■□□ 16.5
SCAMP4-212ENST00000590266 DMRT2Q9Y5R5 561 aa21.36■■□□□ 1.01
SCAMP4-212ENST00000590266 ABCC3O15438 1527 aa21.35■■□□□ 1.01
SCAMP4-212ENST00000590266 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
SCAMP4-212ENST00000590266 ANKRD50Q9ULJ7 1429 aa21.35■■□□□ 1.01
SCAMP4-212ENST00000590266 KANK1Q14678 1352 aa21.35■■□□□ 1.01
SCAMP4-212ENST00000590266 MROH1Q8NDA8 1641 aa21.34■■□□□ 1.01
SCAMP4-212ENST00000590266 PZPP20742 1482 aa21.32■■□□□ 1
SCAMP4-212ENST00000590266 ROCK1Q13464 1354 aa21.32■■□□□ 1
SCAMP4-212ENST00000590266 PRDM15P57071 1507 aaPredicted RBP21.31■■□□□ 1
SCAMP4-212ENST00000590266 TNRQ92752 1358 aa21.31■■□□□ 1
SCAMP4-212ENST00000590266 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
SCAMP4-212ENST00000590266 CERKQ8TCT0 537 aa21.27■■□□□ 1
SCAMP4-212ENST00000590266 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
SCAMP4-212ENST00000590266 CEP152O94986 1710 aa21.26■□□□□ 0.99
SCAMP4-212ENST00000590266 DEPDC5O75140 1603 aa21.25■□□□□ 0.99
SCAMP4-212ENST00000590266 CAMSAP1Q5T5Y3 1602 aa21.24■□□□□ 0.99
SCAMP4-212ENST00000590266 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
SCAMP4-212ENST00000590266 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
SCAMP4-212ENST00000590266 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-212ENST00000590266 A2ML1A8K2U0 1454 aa21.21■□□□□ 0.99
SCAMP4-212ENST00000590266 ARHGAP31Q2M1Z3 1444 aa21.19■□□□□ 0.98
SCAMP4-212ENST00000590266 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
SCAMP4-212ENST00000590266 NCKAP5LQ9HCH0 1330 aa21.18■□□□□ 0.98
SCAMP4-212ENST00000590266 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
SCAMP4-212ENST00000590266 SPATA31D1Q6ZQQ2 1576 aa21.18■□□□□ 0.98
SCAMP4-212ENST00000590266 NUP155O75694 1391 aa21.17■□□□□ 0.98
SCAMP4-212ENST00000590266 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
SCAMP4-212ENST00000590266 ZNF142P52746 1687 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-212ENST00000590266 PTPRTO14522 1441 aa21.16■□□□□ 0.98
SCAMP4-212ENST00000590266 UNC13BO14795 1591 aa21.14■□□□□ 0.98
SCAMP4-212ENST00000590266 EFCAB6Q5THR3 1501 aa21.14■□□□□ 0.98
SCAMP4-212ENST00000590266 NAIPQ13075 1403 aa21.14■□□□□ 0.98
SCAMP4-212ENST00000590266 STRCQ7RTU9 1775 aa21.13■□□□□ 0.97
SCAMP4-212ENST00000590266 THEMISQ8N1K5 641 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-212ENST00000590266 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
SCAMP4-212ENST00000590266 STAG3Q9UJ98 1225 aa21.11■□□□□ 0.97
SCAMP4-212ENST00000590266 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
SCAMP4-212ENST00000590266 PLA2R1Q13018 1463 aa21.1■□□□□ 0.97
SCAMP4-212ENST00000590266 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
SCAMP4-212ENST00000590266 PKD2Q13563 968 aa21.09■□□□□ 0.97
SCAMP4-212ENST00000590266 TET3O43151 1660 aa21.06■□□□□ 0.96
SCAMP4-212ENST00000590266 IDI1Q13907 227 aa21.06■□□□□ 0.96
SCAMP4-212ENST00000590266 ANKLE2Q86XL3 938 aa21.06■□□□□ 0.96
SCAMP4-212ENST00000590266 RPRD2Q5VT52 1461 aaKnown RBP21.06■□□□□ 0.96
SCAMP4-212ENST00000590266 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
SCAMP4-212ENST00000590266 NOS1P29475 1434 aa21.05■□□□□ 0.96
SCAMP4-212ENST00000590266 IQGAP3Q86VI3 1631 aa21.05■□□□□ 0.96
SCAMP4-212ENST00000590266 SYNMO15061 1565 aa21.04■□□□□ 0.96
SCAMP4-212ENST00000590266 CFAP65Q6ZU64 1925 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-212ENST00000590266 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
SCAMP4-212ENST00000590266 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
SCAMP4-212ENST00000590266 PIK3C2BO00750 1634 aa21■□□□□ 0.95
SCAMP4-212ENST00000590266 E9PCH4 1651 aa20.99■□□□□ 0.95
SCAMP4-212ENST00000590266 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
SCAMP4-212ENST00000590266 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
SCAMP4-212ENST00000590266 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
SCAMP4-212ENST00000590266 EID1Q9Y6B2 187 aa20.97■□□□□ 0.95
SCAMP4-212ENST00000590266 UBR1Q8IWV7 1749 aa20.97■□□□□ 0.95
SCAMP4-212ENST00000590266 NPHP4O75161 1426 aaPredicted RBP20.96■□□□□ 0.95
SCAMP4-212ENST00000590266 NEURL4Q96JN8 1562 aa20.96■□□□□ 0.95
SCAMP4-212ENST00000590266 LTKP29376 864 aa20.95■□□□□ 0.94
SCAMP4-212ENST00000590266 LTBP4Q8N2S1 1624 aa20.95■□□□□ 0.94
SCAMP4-212ENST00000590266 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
SCAMP4-212ENST00000590266 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
SCAMP4-212ENST00000590266 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
SCAMP4-212ENST00000590266 SCAF11Q99590 1463 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-212ENST00000590266 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
SCAMP4-212ENST00000590266 POLR1AO95602 1720 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-212ENST00000590266 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
SCAMP4-212ENST00000590266 SLIT1O75093 1534 aa20.91■□□□□ 0.94
SCAMP4-212ENST00000590266 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
SCAMP4-212ENST00000590266 MED14O60244 1454 aa20.9■□□□□ 0.94
SCAMP4-212ENST00000590266 FOXD1Q16676 465 aa20.9■□□□□ 0.94
SCAMP4-212ENST00000590266 BCANQ96GW7 911 aa20.9■□□□□ 0.94
SCAMP4-212ENST00000590266 UBAP1LF5GYI3 381 aa20.89■□□□□ 0.93
SCAMP4-212ENST00000590266 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
SCAMP4-212ENST00000590266 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
SCAMP4-212ENST00000590266 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SCAMP4-212ENST00000590266 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
SCAMP4-212ENST00000590266 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
SCAMP4-212ENST00000590266 ZNF326Q5BKZ1 582 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1256.5 ms