RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
MBD1-222ENST00000590208 PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
MBD1-222ENST00000590208 DAXXQ9UER7 740 aaPredicted RBP20.74■□□□□ 0.91
MBD1-222ENST00000590208 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
MBD1-222ENST00000590208 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
MBD1-222ENST00000590208 KTN1Q86UP2 1357 aaKnown RBP20.72■□□□□ 0.91
MBD1-222ENST00000590208 FRAT2O75474 233 aaPredicted RBP20.71■□□□□ 0.91
MBD1-222ENST00000590208 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
MBD1-222ENST00000590208 DCAF11Q8TEB1 546 aa20.71■□□□□ 0.91
MBD1-222ENST00000590208 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
MBD1-222ENST00000590208 PARD3Q8TEW0 1356 aa20.7■□□□□ 0.9
MBD1-222ENST00000590208 UBE2Q2Q8WVN8 375 aa20.7■□□□□ 0.9
MBD1-222ENST00000590208 CFDP1Q9UEE9 299 aaPredicted RBP20.69■□□□□ 0.9
MBD1-222ENST00000590208 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
MBD1-222ENST00000590208 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
MBD1-222ENST00000590208 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
MBD1-222ENST00000590208 C8orf34Q49A92 452 aa20.67■□□□□ 0.9
MBD1-222ENST00000590208 CAMSAP2Q08AD1 1489 aa20.64■□□□□ 0.89
MBD1-222ENST00000590208 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
MBD1-222ENST00000590208 NUP155O75694 1391 aa20.64■□□□□ 0.89
MBD1-222ENST00000590208 E9PCH4 1651 aa20.64■□□□□ 0.89
MBD1-222ENST00000590208 KIAA0586Q9BVV6 1533 aa20.63■□□□□ 0.89
MBD1-222ENST00000590208 RGS3P49796 1198 aa20.63■□□□□ 0.89
MBD1-222ENST00000590208 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
MBD1-222ENST00000590208 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
MBD1-222ENST00000590208 NUP153P49790 1475 aaKnown RBP20.61■□□□□ 0.89
MBD1-222ENST00000590208 CENPQQ7L2Z9 268 aaPredicted RBP20.6■□□□□ 0.89
MBD1-222ENST00000590208 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
MBD1-222ENST00000590208 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
MBD1-222ENST00000590208 BLMP54132 1417 aaPredicted RBP20.58■□□□□ 0.89
MBD1-222ENST00000590208 ANKRD30AQ9BXX3 1397 aa20.58■□□□□ 0.88
MBD1-222ENST00000590208 ADAMTS8Q9UP79 889 aa20.57■□□□□ 0.88
MBD1-222ENST00000590208 ARHGEF12Q9NZN5 1544 aa20.56■□□□□ 0.88
MBD1-222ENST00000590208 PANK3Q9H999 370 aa20.56■□□□□ 0.88
MBD1-222ENST00000590208 ADGBQ8N7X0 1667 aa20.55■□□□□ 0.88
MBD1-222ENST00000590208 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
MBD1-222ENST00000590208 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
MBD1-222ENST00000590208 ADGRL2O95490 1459 aa20.54■□□□□ 0.88
MBD1-222ENST00000590208 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
MBD1-222ENST00000590208 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
MBD1-222ENST00000590208 DUSP27Q5VZP5 1158 aa20.53■□□□□ 0.88
MBD1-222ENST00000590208 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
MBD1-222ENST00000590208 FAM43AQ8N2R8 423 aa20.52■□□□□ 0.88
MBD1-222ENST00000590208 CHD1O14646 1710 aa20.51■□□□□ 0.87
MBD1-222ENST00000590208 POGKQ9P215 609 aa20.51■□□□□ 0.87
MBD1-222ENST00000590208 DISP3Q9P2K9 1392 aa20.51■□□□□ 0.87
MBD1-222ENST00000590208 PLEKHH1Q9ULM0 1364 aa20.51■□□□□ 0.87
MBD1-222ENST00000590208 ZMYM4Q5VZL5 1548 aa20.51■□□□□ 0.87
MBD1-222ENST00000590208 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
MBD1-222ENST00000590208 RSPH6AQ9H0K4 717 aa20.49■□□□□ 0.87
MBD1-222ENST00000590208 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
MBD1-222ENST00000590208 TESK2Q96S53 571 aa20.47■□□□□ 0.87
MBD1-222ENST00000590208 RAPGEF6Q8TEU7 1601 aa20.47■□□□□ 0.87
MBD1-222ENST00000590208 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
MBD1-222ENST00000590208 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
MBD1-222ENST00000590208 USP19O94966 1318 aa20.45■□□□□ 0.86
MBD1-222ENST00000590208 PLEKHH2Q8IVE3 1493 aa20.44■□□□□ 0.86
MBD1-222ENST00000590208 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
MBD1-222ENST00000590208 INSRP06213 1382 aa20.44■□□□□ 0.86
MBD1-222ENST00000590208 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
MBD1-222ENST00000590208 SEC24BO95487 1268 aa20.44■□□□□ 0.86
MBD1-222ENST00000590208 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
MBD1-222ENST00000590208 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
MBD1-222ENST00000590208 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
MBD1-222ENST00000590208 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
MBD1-222ENST00000590208 COL17A1Q9UMD9 1497 aaPredicted RBP20.42■□□□□ 0.86
MBD1-222ENST00000590208 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
MBD1-222ENST00000590208 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
MBD1-222ENST00000590208 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
MBD1-222ENST00000590208 IGHDP01880 384 aa20.41■□□□□ 0.86
MBD1-222ENST00000590208 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
MBD1-222ENST00000590208 ARXQ96QS3 562 aa20.41■□□□□ 0.86
MBD1-222ENST00000590208 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 BCAR3O75815 825 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
MBD1-222ENST00000590208 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
MBD1-222ENST00000590208 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
MBD1-222ENST00000590208 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
MBD1-222ENST00000590208 PPP2R1AP30153 589 aa20.38■□□□□ 0.85
MBD1-222ENST00000590208 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.85
MBD1-222ENST00000590208 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
MBD1-222ENST00000590208 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
MBD1-222ENST00000590208 TMF1P82094 1093 aa20.36■□□□□ 0.85
MBD1-222ENST00000590208 CCDC144AA2RUR9 1427 aa20.35■□□□□ 0.85
MBD1-222ENST00000590208 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
MBD1-222ENST00000590208 PTPRGP23470 1445 aa20.35■□□□□ 0.85
MBD1-222ENST00000590208 GPRASP1Q5JY77 1395 aa20.34■□□□□ 0.85
MBD1-222ENST00000590208 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.84
MBD1-222ENST00000590208 CDC42BPAQ5VT25 1732 aa20.32■□□□□ 0.84
MBD1-222ENST00000590208 A2MP01023 1474 aa20.32■□□□□ 0.84
MBD1-222ENST00000590208 NUP160Q12769 1436 aa20.31■□□□□ 0.84
MBD1-222ENST00000590208 APAF1O14727 1248 aa20.31■□□□□ 0.84
MBD1-222ENST00000590208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.84
MBD1-222ENST00000590208 MAGI2Q86UL8 1455 aa20.31■□□□□ 0.84
MBD1-222ENST00000590208 EIF3AQ14152 1382 aaKnown RBP20.3■□□□□ 0.84
MBD1-222ENST00000590208 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
MBD1-222ENST00000590208 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms