RNA–Protein interactions for RNA: ENST00000590099.5

BECN1-213, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-213ENST00000590099 ARID4BQ4LE39 1312 aaPredicted RBP22.27■■□□□ 1.16
BECN1-213ENST00000590099 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
BECN1-213ENST00000590099 DUOX2Q9NRD8 1548 aa22.24■■□□□ 1.15
BECN1-213ENST00000590099 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
BECN1-213ENST00000590099 CARD11Q9BXL7 1154 aa22.23■■□□□ 1.15
BECN1-213ENST00000590099 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
BECN1-213ENST00000590099 FANCAO15360 1455 aa22.22■■□□□ 1.15
BECN1-213ENST00000590099 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
BECN1-213ENST00000590099 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
BECN1-213ENST00000590099 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
BECN1-213ENST00000590099 ERBINQ96RT1 1412 aa22.2■■□□□ 1.14
BECN1-213ENST00000590099 IQGAP3Q86VI3 1631 aa22.2■■□□□ 1.14
BECN1-213ENST00000590099 NEFLP07196 543 aa22.19■■□□□ 1.14
BECN1-213ENST00000590099 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
BECN1-213ENST00000590099 NPM1P06748 294 aaKnown RBP eCLIP22.19■■□□□ 1.14
BECN1-213ENST00000590099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.141e-6■□□□□ 11.3
BECN1-213ENST00000590099 ZFYVE16Q7Z3T8 1539 aa22.18■■□□□ 1.14
BECN1-213ENST00000590099 MAGI2Q86UL8 1455 aa22.17■■□□□ 1.14
BECN1-213ENST00000590099 BCANQ96GW7 911 aa22.17■■□□□ 1.14
BECN1-213ENST00000590099 AFAP1Q8N556 730 aa22.16■■□□□ 1.14
BECN1-213ENST00000590099 SPAG9O60271 1321 aaKnown RBP22.15■■□□□ 1.14
BECN1-213ENST00000590099 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
BECN1-213ENST00000590099 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
BECN1-213ENST00000590099 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
BECN1-213ENST00000590099 FAM9BQ8IZU0 186 aa22.15■■□□□ 1.14
BECN1-213ENST00000590099 ATP10AO60312 1499 aa22.13■■□□□ 1.13
BECN1-213ENST00000590099 ADGRL1O94910 1474 aa22.13■■□□□ 1.13
BECN1-213ENST00000590099 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
BECN1-213ENST00000590099 INO80Q9ULG1 1556 aaPredicted RBP22.12■■□□□ 1.13
BECN1-213ENST00000590099 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
BECN1-213ENST00000590099 TRPM1Q7Z4N2 1603 aa22.1■■□□□ 1.13
BECN1-213ENST00000590099 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
BECN1-213ENST00000590099 A2MP01023 1474 aa22.1■■□□□ 1.13
BECN1-213ENST00000590099 ATP7AQ04656 1500 aa22.09■■□□□ 1.13
BECN1-213ENST00000590099 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
BECN1-213ENST00000590099 ZBED9Q6R2W3 1325 aa22.07■■□□□ 1.12
BECN1-213ENST00000590099 TSHZ2Q9NRE2 1034 aa22.07■■□□□ 1.12
BECN1-213ENST00000590099 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
BECN1-213ENST00000590099 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
BECN1-213ENST00000590099 CFAP74Q9C0B2 1584 aa22.03■■□□□ 1.12
BECN1-213ENST00000590099 DEPDC5O75140 1603 aa22.02■■□□□ 1.12
BECN1-213ENST00000590099 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
BECN1-213ENST00000590099 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
BECN1-213ENST00000590099 LAMC1P11047 1609 aa22■■□□□ 1.11
BECN1-213ENST00000590099 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
BECN1-213ENST00000590099 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
BECN1-213ENST00000590099 ZNF518AQ6AHZ1 1483 aa21.99■■□□□ 1.11
BECN1-213ENST00000590099 KIDINS220Q9ULH0 1771 aa21.99■■□□□ 1.11
BECN1-213ENST00000590099 E9PCH4 1651 aa21.98■■□□□ 1.11
BECN1-213ENST00000590099 PRDM15P57071 1507 aaPredicted RBP21.98■■□□□ 1.11
BECN1-213ENST00000590099 EIF2AK4Q9P2K8 1649 aaKnown RBP21.97■■□□□ 1.11
BECN1-213ENST00000590099 POGZQ7Z3K3 1410 aa21.96■■□□□ 1.11
BECN1-213ENST00000590099 VWDEQ8N2E2 1590 aa21.96■■□□□ 1.11
BECN1-213ENST00000590099 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.11
BECN1-213ENST00000590099 KTN1Q86UP2 1357 aaKnown RBP21.95■■□□□ 1.1
BECN1-213ENST00000590099 PNISRQ8TF01 805 aaKnown RBP21.95■■□□□ 1.1
BECN1-213ENST00000590099 TESK2Q96S53 571 aa21.94■■□□□ 1.1
BECN1-213ENST00000590099 NEO1Q92859 1461 aa21.93■■□□□ 1.1
BECN1-213ENST00000590099 PTPRTO14522 1441 aa21.93■■□□□ 1.1
BECN1-213ENST00000590099 RALBP1Q15311 655 aa21.92■■□□□ 1.1
BECN1-213ENST00000590099 MROH1Q8NDA8 1641 aa21.92■■□□□ 1.1
BECN1-213ENST00000590099 TRPM2O94759 1503 aa21.92■■□□□ 1.1
BECN1-213ENST00000590099 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
BECN1-213ENST00000590099 MLH3Q9UHC1 1453 aa21.91■■□□□ 1.1
BECN1-213ENST00000590099 IRX6P78412 446 aaPredicted RBP21.91■■□□□ 1.1
BECN1-213ENST00000590099 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
BECN1-213ENST00000590099 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
BECN1-213ENST00000590099 MYBBP1AQ9BQG0 1328 aaKnown RBP21.9■■□□□ 1.1
BECN1-213ENST00000590099 TET3O43151 1660 aa21.9■■□□□ 1.1
BECN1-213ENST00000590099 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
BECN1-213ENST00000590099 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.1
BECN1-213ENST00000590099 BRD4O60885 1362 aaPredicted RBP21.89■■□□□ 1.09
BECN1-213ENST00000590099 KIF3BO15066 747 aa21.89■■□□□ 1.09
BECN1-213ENST00000590099 PER1O15534 1290 aaPredicted RBP21.89■■□□□ 1.09
BECN1-213ENST00000590099 GLI2P10070 1586 aa21.89■■□□□ 1.09
BECN1-213ENST00000590099 DISP3Q9P2K9 1392 aa21.88■■□□□ 1.09
BECN1-213ENST00000590099 RNF17Q9BXT8 1623 aaKnown RBP21.88■■□□□ 1.09
BECN1-213ENST00000590099 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
BECN1-213ENST00000590099 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
BECN1-213ENST00000590099 KANK1Q14678 1352 aa21.87■■□□□ 1.09
BECN1-213ENST00000590099 LRPPRCP42704 1394 aaKnown RBP21.86■■□□□ 1.09
BECN1-213ENST00000590099 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
BECN1-213ENST00000590099 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
BECN1-213ENST00000590099 SMG6Q86US8 1419 aaKnown RBP21.85■■□□□ 1.09
BECN1-213ENST00000590099 CEP152O94986 1710 aa21.85■■□□□ 1.09
BECN1-213ENST00000590099 PARD3Q8TEW0 1356 aa21.85■■□□□ 1.09
BECN1-213ENST00000590099 MADDQ8WXG6 1647 aa21.84■■□□□ 1.09
BECN1-213ENST00000590099 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
BECN1-213ENST00000590099 TMF1P82094 1093 aa21.82■■□□□ 1.08
BECN1-213ENST00000590099 WASHC2CQ9Y4E1 1318 aa21.82■■□□□ 1.08
BECN1-213ENST00000590099 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
BECN1-213ENST00000590099 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
BECN1-213ENST00000590099 RAPGEF3O95398 923 aa21.79■■□□□ 1.08
BECN1-213ENST00000590099 NLRP13Q86W25 1043 aa21.79■■□□□ 1.08
BECN1-213ENST00000590099 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
BECN1-213ENST00000590099 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
BECN1-213ENST00000590099 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
BECN1-213ENST00000590099 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
BECN1-213ENST00000590099 RICTORQ6R327 1708 aa21.78■■□□□ 1.08
BECN1-213ENST00000590099 PANK3Q9H999 370 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms